RNA–Protein interactions for RNA: YOR359W

VTS1, Transcript of Flap-structured DNA-binding and RNA-binding protein, yeast

Gene VTS1, Length 1,572 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTS1	YOR359W	YKR018C	P36114	725 aa		7.38	□□□□□ -1.23
VTS1	YOR359W	YSW1	P38280	609 aa		7.38	□□□□□ -1.23
VTS1	YOR359W	ETP1	P38748	585 aa	Known RBP	7.38	□□□□□ -1.23
VTS1	YOR359W	ARB1	P40024	610 aa	Known RBP	7.38	□□□□□ -1.23
VTS1	YOR359W	SGM1	P47166	707 aa		7.38	□□□□□ -1.23
VTS1	YOR359W	TAF8	Q03750	510 aa		7.38	□□□□□ -1.23
VTS1	YOR359W	YIG1	Q08956	461 aa		7.38	□□□□□ -1.23
VTS1	YOR359W	SSC1	P0CS90	654 aa	Known RBP	7.37	□□□□□ -1.23
VTS1	YOR359W	SEN2	P16658	377 aa		7.37	□□□□□ -1.23
VTS1	YOR359W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	7.37	□□□□□ -1.23	not detected
VTS1	YOR359W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	7.37	□□□□□ -1.23	not detected
VTS1	YOR359W	DLD1	P32891	587 aa		7.37	□□□□□ -1.23
VTS1	YOR359W	RPC34	P32910	317 aa		7.37	□□□□□ -1.23
VTS1	YOR359W	MAM1	P40065	302 aa		7.37	□□□□□ -1.23
VTS1	YOR359W	YIL001W	P40560	513 aa		7.37	□□□□□ -1.23
VTS1	YOR359W	STB1	P42845	420 aa		7.37	□□□□□ -1.23
VTS1	YOR359W	IOC3	P43596	787 aa		7.37	□□□□□ -1.23
VTS1	YOR359W	CTH1	P47976	325 aa		7.37	□□□□□ -1.23
VTS1	YOR359W	NCS2	P53923	493 aa	Predicted RBP	7.37	□□□□□ -1.23
VTS1	YOR359W	MGR3	Q04472	501 aa		7.37	□□□□□ -1.23
VTS1	YOR359W	YLR326W	Q06170	240 aa	Known RBP	7.37	□□□□□ -1.23
VTS1	YOR359W	JIP5	Q06214	492 aa	Predicted RBP	7.37	□□□□□ -1.23
VTS1	YOR359W	CLP1	Q08685	445 aa	Predicted RBP	7.37	□□□□□ -1.23
VTS1	YOR359W	RIO1	Q12196	484 aa	Known RBP	7.37	□□□□□ -1.23
VTS1	YOR359W	YRF1-4	O13559	1382 aa		7.37	□□□□□ -1.23
VTS1	YOR359W	NPL6	P32832	435 aa		7.37	□□□□□ -1.23
VTS1	YOR359W	TTI1	P36097	1038 aa		7.37	□□□□□ -1.23
VTS1	YOR359W	AMN1	P38285	549 aa	Predicted RBP	7.37	□□□□□ -1.23
VTS1	YOR359W	SET1	P38827	1080 aa	Known RBP	7.37	□□□□□ -1.23
VTS1	YOR359W	ELA1	P53861	379 aa	Predicted RBP	7.37	□□□□□ -1.23
VTS1	YOR359W	RBA50	Q04418	439 aa		7.37	□□□□□ -1.23
VTS1	YOR359W	YDL073W	Q07454	984 aa		7.37	□□□□□ -1.23
VTS1	YOR359W	GNT1	Q12096	491 aa		7.37	□□□□□ -1.23
VTS1	YOR359W	RAS1	P01119	309 aa		7.36	□□□□□ -1.23
VTS1	YOR359W	CMP2	P14747	604 aa		7.36	□□□□□ -1.23
VTS1	YOR359W	SPE2	P21182	396 aa		7.36	□□□□□ -1.23
VTS1	YOR359W	PDB1	P32473	366 aa	Known RBP	7.36	□□□□□ -1.23
VTS1	YOR359W	MRPL40	P36534	297 aa		7.36	□□□□□ -1.23
VTS1	YOR359W	PIH1	P38768	344 aa		7.36	□□□□□ -1.23
VTS1	YOR359W	VPS8	P39702	1274 aa		7.36	□□□□□ -1.23
VTS1	YOR359W	YTA6	P40328	754 aa		7.36	□□□□□ -1.23
VTS1	YOR359W	UTP18	P40362	594 aa	Predicted RBP	7.36	□□□□□ -1.23
VTS1	YOR359W	YJR008W	P47085	338 aa		7.36	□□□□□ -1.23
VTS1	YOR359W	RBL2	P48606	106 aa	Known RBP	7.36	□□□□□ -1.23
VTS1	YOR359W	RAT1	Q02792	1006 aa	Known RBP	7.36	□□□□□ -1.23
VTS1	YOR359W	PNG1	Q02890	363 aa		7.36	□□□□□ -1.23
VTS1	YOR359W	PMT7	Q06644	662 aa		7.36	□□□□□ -1.23
VTS1	YOR359W	SDH5	Q08230	162 aa		7.36	□□□□□ -1.23
VTS1	YOR359W	ISU2	Q12056	156 aa		7.36	□□□□□ -1.23
VTS1	YOR359W	KCC4	P25389	1037 aa		7.35	□□□□□ -1.23
VTS1	YOR359W	RIB7	P33312	244 aa		7.35	□□□□□ -1.23
VTS1	YOR359W	YBR242W	P38331	238 aa		7.35	□□□□□ -1.23
VTS1	YOR359W	YHB1	P39676	399 aa	Known RBP	7.35	□□□□□ -1.23
VTS1	YOR359W	SWD1	P39706	426 aa		7.35	□□□□□ -1.23
VTS1	YOR359W	VHR2	P40041	505 aa		7.35	□□□□□ -1.23
VTS1	YOR359W	VID27	P40157	782 aa		7.35	□□□□□ -1.23
VTS1	YOR359W	ARR2	Q06597	130 aa		7.35	□□□□□ -1.23
VTS1	YOR359W	TSR2	Q06672	205 aa	Known RBP	7.35	□□□□□ -1.23
VTS1	YOR359W	IES3	Q12345	250 aa		7.35	□□□□□ -1.23
VTS1	YOR359W	LSO2	Q3E772	92 aa	Known RBP	7.35	□□□□□ -1.23
VTS1	YOR359W	TY2B-LR1	P0C2J3	1770 aa		7.34	□□□□□ -1.23
VTS1	YOR359W	TY2B-F	P0CX63	1770 aa		7.34	□□□□□ -1.23
VTS1	YOR359W	TY2B-GR2	P0CX64	1770 aa		7.34	□□□□□ -1.23
VTS1	YOR359W	TY2B-C	P25384	1770 aa		7.34	□□□□□ -1.23
VTS1	YOR359W	TY2B-DR2	Q03494	1770 aa		7.34	□□□□□ -1.23
VTS1	YOR359W	TY1B-DR1	Q03855	1755 aa		7.34	□□□□□ -1.23
VTS1	YOR359W	TY2B-DR3	Q07791	1770 aa	Known RBP	7.34	□□□□□ -1.23
VTS1	YOR359W	TY2B-OR1	Q12113	1770 aa		7.34	□□□□□ -1.23
VTS1	YOR359W	TY2B-DR1	Q12472	1770 aa		7.34	□□□□□ -1.23
VTS1	YOR359W	TY2B-B	Q12491	1770 aa		7.34	□□□□□ -1.23
VTS1	YOR359W	TY2B-OR2	Q12501	1770 aa		7.34	□□□□□ -1.23
VTS1	YOR359W	TY1B-DR3	Q99231	1755 aa		7.34	□□□□□ -1.23
VTS1	YOR359W	HIS3	P06633	220 aa		7.34	□□□□□ -1.23
VTS1	YOR359W	ADE3	P07245	946 aa	Known RBP	7.34	□□□□□ -1.23
VTS1	YOR359W	VAS1	P07806	1104 aa	Known RBP	7.34	□□□□□ -1.23
VTS1	YOR359W	ATE1	P16639	503 aa		7.34	□□□□□ -1.23
VTS1	YOR359W	CCT4	P39078	528 aa	Known RBP	7.34	□□□□□ -1.23
VTS1	YOR359W	FTR1	P40088	404 aa		7.34	□□□□□ -1.23
VTS1	YOR359W	LAM5	P43560	674 aa		7.34	□□□□□ -1.23
VTS1	YOR359W	GCD14	P46959	383 aa	Predicted RBP	7.34	□□□□□ -1.23
VTS1	YOR359W	BFA1	P47113	574 aa		7.34	□□□□□ -1.23
VTS1	YOR359W	ECL1	P48235	211 aa		7.34	□□□□□ -1.23
VTS1	YOR359W	OCA1	P50946	238 aa	Predicted RBP	7.34	□□□□□ -1.23
VTS1	YOR359W	YOL098C	Q12496	1037 aa		7.34	□□□□□ -1.23
VTS1	YOR359W	HTZ1	Q12692	134 aa	Known RBP	7.34	□□□□□ -1.23
VTS1	YOR359W	RNR2	P09938	399 aa	Known RBP	7.33	□□□□□ -1.24
VTS1	YOR359W	YMR085W	P0CF18	432 aa		7.33	□□□□□ -1.24
VTS1	YOR359W	RPO26	P20435	155 aa		7.33	□□□□□ -1.24
VTS1	YOR359W	ITR2	P30606	609 aa		7.33	□□□□□ -1.24
VTS1	YOR359W	ACP1	P32463	125 aa		7.33	□□□□□ -1.24
VTS1	YOR359W	RTS1	P38903	757 aa		7.33	□□□□□ -1.24
VTS1	YOR359W	PHB1	P40961	287 aa		7.33	□□□□□ -1.24
VTS1	YOR359W	CAF130	P53280	1122 aa	Predicted RBP	7.33	□□□□□ -1.24
VTS1	YOR359W	YKR005C	Q02203	525 aa		7.33	□□□□□ -1.24
VTS1	YOR359W	CWC15	Q03772	175 aa	Known RBP	7.33	□□□□□ -1.24
VTS1	YOR359W	SPP382	Q06411	708 aa	Predicted RBP	7.33	□□□□□ -1.24
VTS1	YOR359W	YLH47	Q06493	454 aa		7.33	□□□□□ -1.24
VTS1	YOR359W	RKM1	Q08961	583 aa	Predicted RBP	7.33	□□□□□ -1.24
VTS1	YOR359W	NOT5	Q12514	560 aa	Predicted RBP	7.33	□□□□□ -1.24
VTS1	YOR359W	RRP5	Q05022	1729 aa	Known RBP	7.33	□□□□□ -1.24

Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms