RNA–Protein interactions for RNA: YOR341W

RPA190, Transcript of RNA polymerase I largest subunit A190, yeastyeast

Gene RPA190, Length 4,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA190YOR341W CET1O13297 549 aaPredicted RBP3.43□□□□□ -1.86
RPA190YOR341W SEM1O94742 89 aa3.43□□□□□ -1.86
RPA190YOR341W PRE8P23639 250 aa3.43□□□□□ -1.86
RPA190YOR341W CDC48P25694 835 aaKnown RBP3.43□□□□□ -1.86
RPA190YOR341W FOL1P53848 824 aa3.43□□□□□ -1.86
RPA190YOR341W ECM30Q06673 1274 aa3.43□□□□□ -1.86
RPA190YOR341W MDM20Q12387 796 aaKnown RBP3.43□□□□□ -1.86
RPA190YOR341W MOT2P34909 587 aaKnown RBP3.43□□□□□ -1.86
RPA190YOR341W SKI2P35207 1287 aaKnown RBP RIP-Chip data3.43□□□□□ -1.86not detected
RPA190YOR341W KDX1P36005 433 aa3.43□□□□□ -1.86
RPA190YOR341W CSM2P40465 213 aa3.43□□□□□ -1.86
RPA190YOR341W CIR1P42940 261 aa3.43□□□□□ -1.86
RPA190YOR341W ART5P53244 586 aaKnown RBP3.43□□□□□ -1.86
RPA190YOR341W UFD2P54860 961 aa3.43□□□□□ -1.86
RPA190YOR341W YCG1Q06680 1035 aa3.43□□□□□ -1.86
RPA190YOR341W KSP1P38691 1029 aaKnown RBP3.43□□□□□ -1.86
RPA190YOR341W YJR008WP47085 338 aa3.43□□□□□ -1.86
RPA190YOR341W ESC8Q08119 714 aa3.43□□□□□ -1.86
RPA190YOR341W SGM1P47166 707 aa3.42□□□□□ -1.86
RPA190YOR341W UBP10P53874 792 aaPredicted RBP3.42□□□□□ -1.86
RPA190YOR341W NOP13P53883 403 aaKnown RBP RIP-Chip data3.42□□□□□ -1.86not detected
RPA190YOR341W OYE2Q03558 400 aaKnown RBP3.42□□□□□ -1.86
RPA190YOR341W YML037CQ03703 340 aa3.42□□□□□ -1.86
RPA190YOR341W YLR257WQ06146 321 aaKnown RBP3.42□□□□□ -1.86
RPA190YOR341W RAD59Q12223 238 aa3.42□□□□□ -1.86
RPA190YOR341W FRS2P15625 503 aaKnown RBP3.42□□□□□ -1.86
RPA190YOR341W GSY1P23337 708 aa3.42□□□□□ -1.86
RPA190YOR341W BRL1P38770 471 aa3.42□□□□□ -1.86
RPA190YOR341W BOI2P39969 1040 aa3.42□□□□□ -1.86
RPA190YOR341W AIM21P40563 679 aa3.42□□□□□ -1.86
RPA190YOR341W DAK1P54838 584 aaKnown RBP3.42□□□□□ -1.86
RPA190YOR341W PGM1P33401 570 aaKnown RBP3.42□□□□□ -1.86
RPA190YOR341W LAM5P43560 674 aa3.42□□□□□ -1.86
RPA190YOR341W NAF1P53919 492 aaKnown RBP3.42□□□□□ -1.86
RPA190YOR341W TRM11Q12463 433 aa3.42□□□□□ -1.86
RPA190YOR341W KIN1P13185 1064 aa3.42□□□□□ -1.86
RPA190YOR341W RFC1P38630 861 aaKnown RBP3.42□□□□□ -1.86
RPA190YOR341W PPX1P38698 397 aa3.42□□□□□ -1.86
RPA190YOR341W YEL025CP39991 1188 aa3.42□□□□□ -1.86
RPA190YOR341W GYP8P43570 497 aa3.42□□□□□ -1.86
RPA190YOR341W DNL4Q08387 944 aaPredicted RBP3.42□□□□□ -1.86
RPA190YOR341W SSB1P11484 613 aaKnown RBP3.41□□□□□ -1.86
RPA190YOR341W SRM1P21827 482 aa3.41□□□□□ -1.86
RPA190YOR341W SSB2P40150 613 aaKnown RBP3.41□□□□□ -1.86
RPA190YOR341W SPO22P40511 975 aa3.41□□□□□ -1.86
RPA190YOR341W MET13P53128 600 aa3.41□□□□□ -1.86
RPA190YOR341W EBP2P36049 427 aaKnown RBP3.41□□□□□ -1.86
RPA190YOR341W RPN3P40016 523 aaKnown RBP3.41□□□□□ -1.86
RPA190YOR341W ESL1P40456 1118 aa3.41□□□□□ -1.86
RPA190YOR341W BUD6P41697 788 aa3.41□□□□□ -1.86
RPA190YOR341W PUF6Q04373 656 aaKnown RBP3.41□□□□□ -1.86
RPA190YOR341W PIG1Q06216 648 aa3.41□□□□□ -1.86
RPA190YOR341W RDH54P38086 958 aa3.41□□□□□ -1.86
RPA190YOR341W CLU1Q03690 1277 aaKnown RBP3.41□□□□□ -1.86
RPA190YOR341W SPB4P25808 606 aaPredicted RBP3.41□□□□□ -1.86
RPA190YOR341W RAD54P32863 898 aa3.41□□□□□ -1.86
RPA190YOR341W DSF2P38213 736 aa3.41□□□□□ -1.86
RPA190YOR341W SEC5P89102 971 aa3.41□□□□□ -1.86
RPA190YOR341W MSC2Q03455 724 aa3.41□□□□□ -1.86
RPA190YOR341W PGK1P00560 416 aaKnown RBP3.4□□□□□ -1.87
RPA190YOR341W HMG2P12684 1045 aa3.4□□□□□ -1.87
RPA190YOR341W CAF20P12962 161 aaKnown RBP3.4□□□□□ -1.87
RPA190YOR341W DUR3P33413 735 aa3.4□□□□□ -1.87
RPA190YOR341W RPT6Q01939 405 aaKnown RBP3.4□□□□□ -1.87
RPA190YOR341W EST2Q06163 884 aa3.4□□□□□ -1.87
RPA190YOR341W GAP1P19145 602 aaPredicted RBP3.4□□□□□ -1.87
RPA190YOR341W UBP13P38187 747 aa3.4□□□□□ -1.87
RPA190YOR341W ISM1P48526 1002 aa3.4□□□□□ -1.87
RPA190YOR341W VPS72Q03388 795 aa3.4□□□□□ -1.87
RPA190YOR341W GUD1Q07729 489 aa3.4□□□□□ -1.87
RPA190YOR341W APL5Q08951 932 aaKnown RBP3.4□□□□□ -1.87
RPA190YOR341W IMG2P25642 146 aaPredicted RBP3.4□□□□□ -1.87
RPA190YOR341W SEC21P32074 935 aaKnown RBP3.4□□□□□ -1.87
RPA190YOR341W VPS25P47142 202 aa3.4□□□□□ -1.87
RPA190YOR341W MDM1Q01846 1127 aa3.4□□□□□ -1.87
RPA190YOR341W DBP5P20449 482 aaKnown RBP3.39□□□□□ -1.87
RPA190YOR341W HUL4P40985 892 aa3.39□□□□□ -1.87
RPA190YOR341W LSB6P42951 607 aa3.39□□□□□ -1.87
RPA190YOR341W ATP1P07251 545 aaKnown RBP3.39□□□□□ -1.87
RPA190YOR341W RPS19AP07280 144 aaKnown RBP3.39□□□□□ -1.87
RPA190YOR341W RPS19BP07281 144 aaPredicted RBP3.39□□□□□ -1.87
RPA190YOR341W RNR2P09938 399 aaKnown RBP3.39□□□□□ -1.87
RPA190YOR341W MAK11P20484 414 aaKnown RBP3.39□□□□□ -1.87
RPA190YOR341W RRP14P36080 434 aaKnown RBP3.39□□□□□ -1.87
RPA190YOR341W UBP9P39967 754 aa3.39□□□□□ -1.87
RPA190YOR341W DSN1P40568 576 aa3.39□□□□□ -1.87
RPA190YOR341W VPS30Q02948 557 aa3.39□□□□□ -1.87
RPA190YOR341W GIR2Q03768 265 aaPredicted RBP3.39□□□□□ -1.87
RPA190YOR341W CSI1Q04368 295 aa3.39□□□□□ -1.87
RPA190YOR341W SNF2P22082 1703 aa3.39□□□□□ -1.87
RPA190YOR341W WHI2P12611 486 aa3.39□□□□□ -1.87
RPA190YOR341W TCP1P12612 559 aaKnown RBP3.39□□□□□ -1.87
RPA190YOR341W TRM2P33753 639 aa3.39□□□□□ -1.87
RPA190YOR341W TVP38P36164 337 aa3.39□□□□□ -1.87
RPA190YOR341W SKP2P42843 763 aa3.39□□□□□ -1.87
RPA190YOR341W BBC1P47068 1157 aa3.39□□□□□ -1.87
RPA190YOR341W FOL2P51601 243 aaKnown RBP3.39□□□□□ -1.87
RPA190YOR341W RPS15Q01855 142 aaKnown RBP3.39□□□□□ -1.87
RPA190YOR341W SMD2Q06217 110 aaKnown RBP3.39□□□□□ -1.87
RPA190YOR341W YDR306CQ06640 478 aa3.39□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms