RNA–Protein interactions for RNA: YML116W

ATR1, Transcript of Multidrug efflux pump of the major facilitator superfamily, yeast

Gene ATR1, Length 1,629 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATR1	YML116W	OSH7	P38755	437 aa		6.65	□□□□□ -1.35
ATR1	YML116W	YGL081W	P53156	320 aa		6.65	□□□□□ -1.35
ATR1	YML116W	NAN1	Q02931	896 aa	Known RBP	6.65	□□□□□ -1.35
ATR1	YML116W	INP54	Q08227	384 aa	Known RBP	6.65	□□□□□ -1.35
ATR1	YML116W	MRPL16	P38064	232 aa		6.64	□□□□□ -1.35
ATR1	YML116W	YHR020W	P38708	688 aa	Known RBP	6.64	□□□□□ -1.35
ATR1	YML116W	SPF1	P39986	1215 aa	Known RBP	6.64	□□□□□ -1.35
ATR1	YML116W	OPI10	Q08202	246 aa		6.64	□□□□□ -1.35
ATR1	YML116W	COB	P00163	385 aa		6.63	□□□□□ -1.35
ATR1	YML116W	ERR1	P0CX10	437 aa		6.63	□□□□□ -1.35
ATR1	YML116W	ERR2	P0CX11	437 aa		6.63	□□□□□ -1.35
ATR1	YML116W	CDC34	P14682	295 aa		6.63	□□□□□ -1.35
ATR1	YML116W	DUT1	P33317	147 aa		6.63	□□□□□ -1.35
ATR1	YML116W	CIC1	P38779	376 aa	Known RBP	6.63	□□□□□ -1.35
ATR1	YML116W	AIM46	P38885	310 aa		6.63	□□□□□ -1.35
ATR1	YML116W	YIL165C	P40446	119 aa		6.63	□□□□□ -1.35
ATR1	YML116W	TYW3	P53177	273 aa		6.63	□□□□□ -1.35
ATR1	YML116W	DNM1	P54861	757 aa		6.63	□□□□□ -1.35
ATR1	YML116W	DAL4	Q04895	635 aa		6.63	□□□□□ -1.35
ATR1	YML116W	YLR346C	Q06139	101 aa		6.63	□□□□□ -1.35
ATR1	YML116W	TY1A-BL	Q12266	440 aa		6.63	□□□□□ -1.35
ATR1	YML116W	SRM1	P21827	482 aa		6.62	□□□□□ -1.35
ATR1	YML116W	GLY1	P37303	387 aa	Known RBP	6.62	□□□□□ -1.35
ATR1	YML116W	APM2	P38700	605 aa		6.62	□□□□□ -1.35
ATR1	YML116W	GCR2	Q01722	534 aa		6.62	□□□□□ -1.35
ATR1	YML116W	UTP14	Q04500	899 aa	Known RBP	6.62	□□□□□ -1.35
ATR1	YML116W	FLP1	P03870	423 aa		6.61	□□□□□ -1.35
ATR1	YML116W	PRE9	P23638	258 aa	Known RBP	6.61	□□□□□ -1.35
ATR1	YML116W	DUR3	P33413	735 aa		6.61	□□□□□ -1.35
ATR1	YML116W	GRX7	P38068	203 aa		6.61	□□□□□ -1.35
ATR1	YML116W	CRP1	P38845	465 aa	Known RBP	6.61	□□□□□ -1.35
ATR1	YML116W	THI4	P32318	326 aa		6.61	□□□□□ -1.35
ATR1	YML116W	YBR287W	P38355	427 aa		6.61	□□□□□ -1.35
ATR1	YML116W	ZDS1	P50111	915 aa	Known RBP	6.61	□□□□□ -1.35
ATR1	YML116W	YLR125W	Q12138	136 aa		6.61	□□□□□ -1.35
ATR1	YML116W	GIN4	Q12263	1142 aa		6.61	□□□□□ -1.35
ATR1	YML116W	IML1	P47170	1584 aa		6.61	□□□□□ -1.35
ATR1	YML116W	CCP1	P00431	361 aa		6.6	□□□□□ -1.35
ATR1	YML116W	UGA4	P32837	571 aa		6.6	□□□□□ -1.35
ATR1	YML116W	ENP1	P38333	483 aa	Known RBP	6.6	□□□□□ -1.35
ATR1	YML116W	MRPS18	P42847	217 aa		6.6	□□□□□ -1.35
ATR1	YML116W	SCW11	P53189	542 aa		6.6	□□□□□ -1.35
ATR1	YML116W	YGR053C	P53234	283 aa		6.6	□□□□□ -1.35
ATR1	YML116W	FLC1	Q08967	793 aa		6.6	□□□□□ -1.35
ATR1	YML116W	NUP188	P52593	1655 aa	Known RBP	6.59	□□□□□ -1.35
ATR1	YML116W	SEC6	P32844	805 aa		6.59	□□□□□ -1.35
ATR1	YML116W	RSP5	P39940	809 aa	Known RBP	6.59	□□□□□ -1.35
ATR1	YML116W	MAK10	Q02197	733 aa		6.59	□□□□□ -1.35
ATR1	YML116W	PYC2	P32327	1180 aa	Known RBP	6.58	□□□□□ -1.36
ATR1	YML116W	YCS4	Q06156	1176 aa		6.58	□□□□□ -1.36
ATR1	YML116W	VMR1	P38735	1592 aa		6.58	□□□□□ -1.36
ATR1	YML116W	MET22	P32179	357 aa		6.58	□□□□□ -1.36
ATR1	YML116W	CHZ1	P40019	153 aa	Predicted RBP	6.58	□□□□□ -1.36
ATR1	YML116W	FOL1	P53848	824 aa		6.58	□□□□□ -1.36
ATR1	YML116W	FAL1	Q12099	399 aa	Known RBP	6.58	□□□□□ -1.36
ATR1	YML116W	MCD1	Q12158	566 aa		6.58	□□□□□ -1.36
ATR1	YML116W	NOP14	Q99207	810 aa	Known RBP	6.58	□□□□□ -1.36
ATR1	YML116W	MCM5	P29496	775 aa	Known RBP	6.57	□□□□□ -1.36
ATR1	YML116W	PRP40	P33203	583 aa	Known RBP	6.57	□□□□□ -1.36
ATR1	YML116W	NCL1	P38205	684 aa	Known RBP	6.57	□□□□□ -1.36
ATR1	YML116W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	6.57	□□□□□ -1.36	not detected
ATR1	YML116W	ECM16	Q04217	1267 aa	Known RBP	6.57	□□□□□ -1.36
ATR1	YML116W	ADR1	P07248	1323 aa		6.56	□□□□□ -1.36
ATR1	YML116W	IDI1	P15496	288 aa		6.56	□□□□□ -1.36
ATR1	YML116W	STE5	P32917	917 aa		6.56	□□□□□ -1.36
ATR1	YML116W	MSC7	P38694	644 aa		6.56	□□□□□ -1.36
ATR1	YML116W	MON1	P53129	644 aa		6.56	□□□□□ -1.36
ATR1	YML116W	BAS1	P22035	811 aa		6.55	□□□□□ -1.36
ATR1	YML116W	YER156C	P40093	338 aa	Known RBP	6.55	□□□□□ -1.36
ATR1	YML116W	NOP2	P40991	618 aa	Known RBP	6.55	□□□□□ -1.36
ATR1	YML116W	ROG3	P43602	733 aa		6.55	□□□□□ -1.36
ATR1	YML116W	NUT1	P53114	1132 aa		6.55	□□□□□ -1.36
ATR1	YML116W	YGR125W	P53273	1036 aa		6.55	□□□□□ -1.36
ATR1	YML116W	YNR029C	P53729	429 aa	Known RBP	6.55	□□□□□ -1.36
ATR1	YML116W	YPL109C	Q02981	657 aa		6.55	□□□□□ -1.36
ATR1	YML116W	MSH6	Q03834	1242 aa		6.55	□□□□□ -1.36
ATR1	YML116W	TY1A-MR1	Q04215	440 aa		6.55	□□□□□ -1.36
ATR1	YML116W	LCB5	Q06147	687 aa	Known RBP	6.55	□□□□□ -1.36
ATR1	YML116W	GCR1	P07261	785 aa		6.54	□□□□□ -1.36
ATR1	YML116W	DIT1	P21623	536 aa		6.54	□□□□□ -1.36
ATR1	YML116W	YBR184W	P38299	523 aa		6.54	□□□□□ -1.36
ATR1	YML116W	PIC2	P40035	300 aa		6.54	□□□□□ -1.36
ATR1	YML116W	CUZ1	P53899	274 aa		6.54	□□□□□ -1.36
ATR1	YML116W	EEB1	Q02891	456 aa		6.54	□□□□□ -1.36
ATR1	YML116W	YDR444W	Q04093	687 aa		6.54	□□□□□ -1.36
ATR1	YML116W	SRB8	P25648	1427 aa		6.54	□□□□□ -1.36
ATR1	YML116W	RAD27	P26793	382 aa		6.54	□□□□□ -1.36
ATR1	YML116W	PPT1	P53043	513 aa		6.54	□□□□□ -1.36
ATR1	YML116W	YDL121C	Q07541	149 aa		6.54	□□□□□ -1.36
ATR1	YML116W	TY1B-NL2	Q99337	1749 aa	Known RBP	6.53	□□□□□ -1.36
ATR1	YML116W	ECM2	P38241	364 aa	Known RBP	6.53	□□□□□ -1.36
ATR1	YML116W	YMR265C	Q03508	461 aa	Known RBP	6.53	□□□□□ -1.36
ATR1	YML116W	NTG2	Q08214	380 aa		6.53	□□□□□ -1.36
ATR1	YML116W	MRP10	O75012	95 aa		6.52	□□□□□ -1.37
ATR1	YML116W	RPL8A	P17076	256 aa	Known RBP	6.52	□□□□□ -1.37
ATR1	YML116W	GAL11	P19659	1081 aa		6.52	□□□□□ -1.37
ATR1	YML116W	RPA135	P22138	1203 aa	Known RBP	6.52	□□□□□ -1.37
ATR1	YML116W	KRE33	P53914	1056 aa	Known RBP	6.52	□□□□□ -1.37
ATR1	YML116W	ULP1	Q02724	621 aa		6.52	□□□□□ -1.37
ATR1	YML116W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	6.52	□□□□□ -1.37	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms