RNA–Protein interactions for RNA: YLR400W

YLR400W, Transcript of Dubious open reading frame, yeast

Gene YLR400W, Length 474 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YLR400W	YLR400W	GTS1	P40956	396 aa		5.03	□□□□□ -1.6
YLR400W	YLR400W	XKS1	P42826	600 aa		5.03	□□□□□ -1.6
YLR400W	YLR400W	MSC6	Q08818	692 aa	Known RBP	5.03	□□□□□ -1.6
YLR400W	YLR400W	SAM35	P14693	329 aa		5.02	□□□□□ -1.61
YLR400W	YLR400W	KAR2	P16474	682 aa	Known RBP	5.02	□□□□□ -1.61
YLR400W	YLR400W	VMA4	P22203	233 aa	Known RBP	5.02	□□□□□ -1.61
YLR400W	YLR400W	THI80	P35202	319 aa		5.02	□□□□□ -1.61
YLR400W	YLR400W	PPX1	P38698	397 aa		5.02	□□□□□ -1.61
YLR400W	YLR400W	PEX28	P38848	579 aa		5.02	□□□□□ -1.61
YLR400W	YLR400W	DAK2	P43550	591 aa		5.02	□□□□□ -1.61
YLR400W	YLR400W	RSA3	Q05942	220 aa	Known RBP	5.02	□□□□□ -1.61
YLR400W	YLR400W	RDH54	P38086	958 aa		5.01	□□□□□ -1.61
YLR400W	YLR400W	RSM26	P47141	266 aa		5.01	□□□□□ -1.61
YLR400W	YLR400W	LAP2	Q10740	671 aa		5.01	□□□□□ -1.61
YLR400W	YLR400W	HEM13	P11353	328 aa	Known RBP	5	□□□□□ -1.61
YLR400W	YLR400W	HSE1	P38753	452 aa		5	□□□□□ -1.61
YLR400W	YLR400W	STM1	P39015	273 aa	Known RBP	5	□□□□□ -1.61
YLR400W	YLR400W	YGL140C	P53120	1219 aa		5	□□□□□ -1.61
YLR400W	YLR400W	YNR063W	P53749	607 aa		5	□□□□□ -1.61
YLR400W	YLR400W	YCR015C	P25616	317 aa		4.99	□□□□□ -1.61
YLR400W	YLR400W	SQT1	P35184	431 aa		4.99	□□□□□ -1.61
YLR400W	YLR400W	QNS1	P38795	714 aa	Known RBP	4.99	□□□□□ -1.61
YLR400W	YLR400W	ADI1	Q03677	179 aa		4.99	□□□□□ -1.61
YLR400W	YLR400W	OXR1	Q08952	273 aa		4.99	□□□□□ -1.61
YLR400W	YLR400W	YDL177C	Q12257	170 aa		4.99	□□□□□ -1.61
YLR400W	YLR400W	WHI5	Q12416	295 aa		4.99	□□□□□ -1.61
YLR400W	YLR400W	MDL2	P33311	773 aa		4.98	□□□□□ -1.61
YLR400W	YLR400W	ADD66	P36040	267 aa		4.98	□□□□□ -1.61
YLR400W	YLR400W	YHL012W	P38709	493 aa		4.98	□□□□□ -1.61
YLR400W	YLR400W	TAF1	P46677	1066 aa		4.98	□□□□□ -1.61
YLR400W	YLR400W	ORC1	P54784	914 aa	Predicted RBP	4.98	□□□□□ -1.61
YLR400W	YLR400W	SEN54	Q02825	467 aa	Predicted RBP	4.98	□□□□□ -1.61
YLR400W	YLR400W	YPL109C	Q02981	657 aa		4.98	□□□□□ -1.61
YLR400W	YLR400W	ESC8	Q08119	714 aa		4.98	□□□□□ -1.61
YLR400W	YLR400W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
YLR400W	YLR400W	PRP6	P19735	899 aa	Predicted RBP	4.97	□□□□□ -1.61
YLR400W	YLR400W	MRPL22	P53881	309 aa		4.97	□□□□□ -1.61
YLR400W	YLR400W	RKM2	Q03942	479 aa		4.97	□□□□□ -1.61
YLR400W	YLR400W	HRK1	Q08732	759 aa	Known RBP	4.97	□□□□□ -1.61
YLR400W	YLR400W	HXK1	P04806	485 aa	Known RBP	4.96	□□□□□ -1.62
YLR400W	YLR400W	ATG14	P38270	344 aa		4.96	□□□□□ -1.62
YLR400W	YLR400W	ETP1	P38748	585 aa	Known RBP	4.96	□□□□□ -1.62
YLR400W	YLR400W	FAA3	P39002	694 aa		4.96	□□□□□ -1.62
YLR400W	YLR400W	YJL045W	P47052	634 aa		4.96	□□□□□ -1.62
YLR400W	YLR400W	SRO9	P25567	434 aa	Known RBP	4.95	□□□□□ -1.62
YLR400W	YLR400W	SLD2	P34252	453 aa		4.95	□□□□□ -1.62
YLR400W	YLR400W	AIM3	P38266	947 aa	Known RBP	4.95	□□□□□ -1.62
YLR400W	YLR400W	PIC2	P40035	300 aa		4.95	□□□□□ -1.62
YLR400W	YLR400W	THI12	P42883	340 aa		4.95	□□□□□ -1.62
YLR400W	YLR400W	THI5	P43534	340 aa		4.95	□□□□□ -1.62
YLR400W	YLR400W	VPS53	P47061	822 aa		4.95	□□□□□ -1.62
YLR400W	YLR400W	THI11	P47183	340 aa		4.95	□□□□□ -1.62
YLR400W	YLR400W	EST2	Q06163	884 aa		4.95	□□□□□ -1.62
YLR400W	YLR400W	THI13	Q07748	340 aa		4.95	□□□□□ -1.62
YLR400W	YLR400W	SEC23	P15303	768 aa	Known RBP	4.94	□□□□□ -1.62
YLR400W	YLR400W	YSC84	P32793	468 aa		4.94	□□□□□ -1.62
YLR400W	YLR400W	AFG2	P32794	780 aa		4.94	□□□□□ -1.62
YLR400W	YLR400W	RPT1	P33299	467 aa	Known RBP	4.93	□□□□□ -1.62
YLR400W	YLR400W	YKL222C	P35995	705 aa		4.93	□□□□□ -1.62
YLR400W	YLR400W	RSC58	Q07979	502 aa		4.93	□□□□□ -1.62
YLR400W	YLR400W	RCL1	Q08096	367 aa	Predicted RBP	4.93	□□□□□ -1.62
YLR400W	YLR400W	KIP1	P28742	1111 aa		4.92	□□□□□ -1.62
YLR400W	YLR400W	AIM26	P32858	118 aa		4.92	□□□□□ -1.62
YLR400W	YLR400W	FLR1	P38124	548 aa		4.92	□□□□□ -1.62
YLR400W	YLR400W	IPL1	P38991	367 aa		4.92	□□□□□ -1.62
YLR400W	YLR400W	GIP4	P39732	760 aa		4.92	□□□□□ -1.62
YLR400W	YLR400W	FOL2	P51601	243 aa	Known RBP	4.92	□□□□□ -1.62
YLR400W	YLR400W	RIM8	P53179	542 aa		4.92	□□□□□ -1.62
YLR400W	YLR400W	HEM3	P28789	327 aa		4.91	□□□□□ -1.62
YLR400W	YLR400W	SEC20	P28791	383 aa		4.91	□□□□□ -1.62
YLR400W	YLR400W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
YLR400W	YLR400W	YPL277C	Q08989	487 aa		4.91	□□□□□ -1.62
YLR400W	YLR400W	SOD2	P00447	233 aa		4.9	□□□□□ -1.63
YLR400W	YLR400W	PAM1	P37304	830 aa	Known RBP	4.9	□□□□□ -1.63
YLR400W	YLR400W	SNO2	P53823	222 aa		4.9	□□□□□ -1.63
YLR400W	YLR400W	BAP2	P38084	609 aa		4.89	□□□□□ -1.63
YLR400W	YLR400W	HOS3	Q02959	697 aa	Known RBP	4.89	□□□□□ -1.63
YLR400W	YLR400W	PTC5	Q12511	572 aa		4.89	□□□□□ -1.63
YLR400W	YLR400W	RPS13	P05756	151 aa	Known RBP	4.88	□□□□□ -1.63
YLR400W	YLR400W	SPS1	P08458	490 aa		4.88	□□□□□ -1.63
YLR400W	YLR400W	TOD6	P34219	525 aa		4.88	□□□□□ -1.63
YLR400W	YLR400W	ALG3	P38179	458 aa		4.88	□□□□□ -1.63
YLR400W	YLR400W	GPB2	P39717	880 aa		4.88	□□□□□ -1.63
YLR400W	YLR400W	MRPS18	P42847	217 aa		4.88	□□□□□ -1.63
YLR400W	YLR400W	SNU71	P53207	620 aa	Known RBP	4.88	□□□□□ -1.63
YLR400W	YLR400W	YGR122W	P53272	402 aa		4.88	□□□□□ -1.63
YLR400W	YLR400W	DED1	P06634	604 aa	Known RBP	4.87	□□□□□ -1.63
YLR400W	YLR400W	TAF13	P11747	167 aa		4.87	□□□□□ -1.63
YLR400W	YLR400W	PRE9	P23638	258 aa	Known RBP	4.87	□□□□□ -1.63
YLR400W	YLR400W	TNA1	P53322	534 aa		4.87	□□□□□ -1.63
YLR400W	YLR400W	HDA2	Q06629	674 aa		4.87	□□□□□ -1.63
YLR400W	YLR400W	NBA1	Q08229	501 aa	Known RBP	4.87	□□□□□ -1.63
YLR400W	YLR400W	MCD1	Q12158	566 aa		4.87	□□□□□ -1.63
YLR400W	YLR400W	COQ4	O13525	335 aa		4.86	□□□□□ -1.63
YLR400W	YLR400W	SNF5	P18480	905 aa		4.86	□□□□□ -1.63
YLR400W	YLR400W	ABZ1	P37254	787 aa	Predicted RBP	4.86	□□□□□ -1.63
YLR400W	YLR400W	ROD1	Q02805	837 aa		4.86	□□□□□ -1.63
YLR400W	YLR400W	SPO21	Q12411	609 aa		4.86	□□□□□ -1.63
YLR400W	YLR400W	RAD2	P07276	1031 aa		4.85	□□□□□ -1.63
YLR400W	YLR400W	RPN3	P40016	523 aa	Known RBP	4.85	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 189.6 ms