RNA–Protein interactions for RNA: YLR022C

SDO1, Transcript of Guanine nucleotide exchange factor (GEF) for Ria1p, yeast

Gene SDO1, Length 753 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SDO1	YLR022C	HVG1	P0CE11	249 aa		5.02	□□□□□ -1.61
SDO1	YLR022C	PYC2	P32327	1180 aa	Known RBP	5.02	□□□□□ -1.61
SDO1	YLR022C	TRS120	Q04183	1289 aa		5.02	□□□□□ -1.61
SDO1	YLR022C	MAG2	Q06436	670 aa	Known RBP	5.02	□□□□□ -1.61
SDO1	YLR022C	CAT8	P39113	1433 aa		5.02	□□□□□ -1.61
SDO1	YLR022C	ERS1	P17261	260 aa		5.01	□□□□□ -1.61
SDO1	YLR022C	TYS1	P36421	394 aa	Known RBP	5.01	□□□□□ -1.61
SDO1	YLR022C	UGA2	P38067	497 aa		5.01	□□□□□ -1.61
SDO1	YLR022C	ERP5	P38819	212 aa		5.01	□□□□□ -1.61
SDO1	YLR022C	POL5	P39985	1022 aa	Known RBP	5.01	□□□□□ -1.61
SDO1	YLR022C	NEO1	P40527	1151 aa		5.01	□□□□□ -1.61
SDO1	YLR022C	CTR9	P89105	1077 aa		5.01	□□□□□ -1.61
SDO1	YLR022C	MAE1	P36013	669 aa	Known RBP	5	□□□□□ -1.61
SDO1	YLR022C	MDJ2	P42834	146 aa		5	□□□□□ -1.61
SDO1	YLR022C	SPO74	P45819	413 aa		5	□□□□□ -1.61
SDO1	YLR022C	NCE103	P53615	221 aa		5	□□□□□ -1.61
SDO1	YLR022C	SDH1	Q00711	640 aa		5	□□□□□ -1.61
SDO1	YLR022C	MNL2	Q12205	849 aa		5	□□□□□ -1.61
SDO1	YLR022C	GLO4	Q12320	285 aa		5	□□□□□ -1.61
SDO1	YLR022C	YBL113C	Q7M4S9	792 aa		5	□□□□□ -1.61
SDO1	YLR022C	COB	P00163	385 aa		4.99	□□□□□ -1.61
SDO1	YLR022C	GRS1	P38088	690 aa	Known RBP	4.99	□□□□□ -1.61
SDO1	YLR022C	SEA4	P38164	1038 aa		4.99	□□□□□ -1.61
SDO1	YLR022C	YJR124C	P47159	448 aa		4.99	□□□□□ -1.61
SDO1	YLR022C	YNR065C	P53751	1116 aa		4.99	□□□□□ -1.61
SDO1	YLR022C	ELG1	Q12050	791 aa		4.99	□□□□□ -1.61
SDO1	YLR022C	HAT1	Q12341	374 aa		4.99	□□□□□ -1.61
SDO1	YLR022C	KIP3	P53086	805 aa	Known RBP	4.98	□□□□□ -1.61
SDO1	YLR022C	CDC55	Q00362	526 aa		4.98	□□□□□ -1.61
SDO1	YLR022C	SPO71	Q03868	1245 aa		4.98	□□□□□ -1.61
SDO1	YLR022C	YNL011C	P53980	444 aa		4.97	□□□□□ -1.61
SDO1	YLR022C	MSH6	Q03834	1242 aa		4.97	□□□□□ -1.61
SDO1	YLR022C	GEA1	P47102	1408 aa	Predicted RBP	4.97	□□□□□ -1.61
SDO1	YLR022C	YCR015C	P25616	317 aa		4.96	□□□□□ -1.62
SDO1	YLR022C	FET4	P40988	552 aa		4.96	□□□□□ -1.62
SDO1	YLR022C	HAS1	Q03532	505 aa	Known RBP	4.96	□□□□□ -1.62
SDO1	YLR022C	BSC2	Q05611	235 aa		4.96	□□□□□ -1.62
SDO1	YLR022C	NUT2	Q06213	157 aa		4.96	□□□□□ -1.62
SDO1	YLR022C	FRT1	Q99332	602 aa		4.96	□□□□□ -1.62
SDO1	YLR022C	RIM11	P38615	370 aa		4.95	□□□□□ -1.62
SDO1	YLR022C	SSF1	P38789	453 aa	Predicted RBP	4.95	□□□□□ -1.62
SDO1	YLR022C	PDR5	P33302	1511 aa	Known RBP	4.95	□□□□□ -1.62
SDO1	YLR022C	GCD1	P09032	578 aa	Predicted RBP	4.94	□□□□□ -1.62
SDO1	YLR022C	MSB1	P21339	1137 aa	Known RBP	4.94	□□□□□ -1.62
SDO1	YLR022C	RNQ1	P25367	405 aa		4.94	□□□□□ -1.62
SDO1	YLR022C	GPI13	Q07830	1017 aa		4.94	□□□□□ -1.62
SDO1	YLR022C	CMR1	Q12510	522 aa	Known RBP	4.94	□□□□□ -1.62
SDO1	YLR022C	FLP1	P03870	423 aa		4.93	□□□□□ -1.62
SDO1	YLR022C	PRP5	P21372	849 aa	Predicted RBP	4.93	□□□□□ -1.62
SDO1	YLR022C	DUR3	P33413	735 aa		4.93	□□□□□ -1.62
SDO1	YLR022C	SAP155	P43612	1002 aa		4.93	□□□□□ -1.62
SDO1	YLR022C	GIC2	Q06648	383 aa		4.93	□□□□□ -1.62
SDO1	YLR022C	NPR1	P22211	790 aa		4.92	□□□□□ -1.62
SDO1	YLR022C	LRG1	P35688	1017 aa		4.92	□□□□□ -1.62
SDO1	YLR022C	ECM2	P38241	364 aa	Known RBP	4.92	□□□□□ -1.62
SDO1	YLR022C	RPN11	P43588	306 aa	Known RBP	4.92	□□□□□ -1.62
SDO1	YLR022C	SEG2	P34250	1132 aa		4.91	□□□□□ -1.62
SDO1	YLR022C	WHI3	P34761	661 aa	Known RBP	4.91	□□□□□ -1.62
SDO1	YLR022C	YKL222C	P35995	705 aa		4.91	□□□□□ -1.62
SDO1	YLR022C	YHL050C	P38721	697 aa		4.91	□□□□□ -1.62
SDO1	YLR022C	YHL008C	P38750	627 aa		4.91	□□□□□ -1.62
SDO1	YLR022C	YHR219W	P38900	624 aa		4.91	□□□□□ -1.62
SDO1	YLR022C	RIA1	P53893	1110 aa		4.91	□□□□□ -1.62
SDO1	YLR022C	YIG1	Q08956	461 aa		4.91	□□□□□ -1.62
SDO1	YLR022C	YRF1-2	P40105	1681 aa		4.91	□□□□□ -1.62
SDO1	YLR022C	KRE5	P22023	1365 aa		4.91	□□□□□ -1.62
SDO1	YLR022C	HTS1	P07263	546 aa	Known RBP	4.9	□□□□□ -1.63
SDO1	YLR022C	POL12	P38121	705 aa	Predicted RBP	4.9	□□□□□ -1.63
SDO1	YLR022C	NUT1	P53114	1132 aa		4.9	□□□□□ -1.63
SDO1	YLR022C	YNR029C	P53729	429 aa	Known RBP	4.9	□□□□□ -1.63
SDO1	YLR022C	FAR11	P53917	953 aa		4.9	□□□□□ -1.63
SDO1	YLR022C	GPT2	P36148	743 aa		4.89	□□□□□ -1.63
SDO1	YLR022C	PPX1	P38698	397 aa		4.89	□□□□□ -1.63
SDO1	YLR022C	STM1	P39015	273 aa	Known RBP	4.89	□□□□□ -1.63
SDO1	YLR022C	GCV1	P48015	400 aa		4.89	□□□□□ -1.63
SDO1	YLR022C	SAM37	P50110	327 aa		4.89	□□□□□ -1.63
SDO1	YLR022C	PMT7	Q06644	662 aa		4.89	□□□□□ -1.63
SDO1	YLR022C	NOC3	Q07896	663 aa	Predicted RBP	4.89	□□□□□ -1.63
SDO1	YLR022C	INP54	Q08227	384 aa	Known RBP	4.89	□□□□□ -1.63
SDO1	YLR022C	MMM1	P41800	426 aa		4.88	□□□□□ -1.63
SDO1	YLR022C	LYS4	P49367	693 aa	Predicted RBP	4.88	□□□□□ -1.63
SDO1	YLR022C	YAF9	P53930	226 aa		4.88	□□□□□ -1.63
SDO1	YLR022C	YOR223W	Q12015	292 aa		4.88	□□□□□ -1.63
SDO1	YLR022C	CFT1	Q06632	1357 aa	Known RBP	4.88	□□□□□ -1.63
SDO1	YLR022C	CIC1	P38779	376 aa	Known RBP	4.87	□□□□□ -1.63
SDO1	YLR022C	NIT1	P40447	199 aa		4.87	□□□□□ -1.63
SDO1	YLR022C	EDE1	P34216	1381 aa		4.87	□□□□□ -1.63
SDO1	YLR022C	RVS167	P39743	482 aa	Known RBP	4.86	□□□□□ -1.63
SDO1	YLR022C	DOT1	Q04089	582 aa	Known RBP	4.86	□□□□□ -1.63
SDO1	YLR022C	MSC6	Q08818	692 aa	Known RBP	4.86	□□□□□ -1.63
SDO1	YLR022C	YLL054C	Q12244	843 aa		4.86	□□□□□ -1.63
SDO1	YLR022C	PHO4	P07270	312 aa	Known RBP	4.85	□□□□□ -1.63
SDO1	YLR022C	UTP22	P53254	1237 aa	Predicted RBP	4.85	□□□□□ -1.63
SDO1	YLR022C	MEC3	Q02574	474 aa		4.85	□□□□□ -1.63
SDO1	YLR022C	DFG16	Q99234	619 aa		4.85	□□□□□ -1.63
SDO1	YLR022C	GCN2	P15442	1659 aa		4.85	□□□□□ -1.63
SDO1	YLR022C	MET4	P32389	672 aa		4.84	□□□□□ -1.63
SDO1	YLR022C	GCD6	P32501	712 aa	Known RBP	4.84	□□□□□ -1.63
SDO1	YLR022C	VPS35	P34110	944 aa		4.84	□□□□□ -1.63
SDO1	YLR022C	CIT3	P43635	486 aa		4.84	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms