RNA–Protein interactions for RNA: YKR040C

YKR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YKR040C, Length 504 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YKR040CYKR040C BRE5P53741 515 aaKnown RBP13.35□□□□□ -0.27
YKR040CYKR040C SUT2Q12286 268 aa13.35□□□□□ -0.27
YKR040CYKR040C PHR1P05066 565 aaKnown RBP RIP-Chip data13.34□□□□□ -0.27not detected
YKR040CYKR040C MET6P05694 767 aaKnown RBP13.34□□□□□ -0.27
YKR040CYKR040C LDH1P38139 375 aa13.34□□□□□ -0.27
YKR040CYKR040C YJR107WP47145 328 aa13.34□□□□□ -0.27
YKR040CYKR040C TY1B-AO13527 1196 aaKnown RBP13.33□□□□□ -0.28
YKR040CYKR040C RNR2P09938 399 aaKnown RBP13.33□□□□□ -0.28
YKR040CYKR040C MATALPHA2P0CY08 210 aa13.33□□□□□ -0.28
YKR040CYKR040C HMLALPHA2P0CY09 210 aa13.33□□□□□ -0.28
YKR040CYKR040C STI1P15705 589 aaKnown RBP RIP-Chip data13.33□□□□□ -0.28not detected
YKR040CYKR040C HCA4P20448 770 aaKnown RBP13.33□□□□□ -0.28
YKR040CYKR040C MCM4P30665 933 aaKnown RBP13.33□□□□□ -0.28
YKR040CYKR040C BMH2P34730 273 aaKnown RBP13.33□□□□□ -0.28
YKR040CYKR040C ISA1Q07821 250 aaPredicted RBP13.33□□□□□ -0.28
YKR040CYKR040C TKL1P23254 680 aaKnown RBP13.32□□□□□ -0.28
YKR040CYKR040C SEC8P32855 1065 aa13.32□□□□□ -0.28
YKR040CYKR040C REG2P38232 338 aa13.32□□□□□ -0.28
YKR040CYKR040C PRY3P47033 881 aa13.32□□□□□ -0.28
YKR040CYKR040C TSR3Q12094 313 aaKnown RBP13.32□□□□□ -0.28
YKR040CYKR040C SWI4P25302 1093 aaKnown RBP13.31□□□□□ -0.28
YKR040CYKR040C UGA4P32837 571 aa13.31□□□□□ -0.28
YKR040CYKR040C TFC4P33339 1025 aa13.31□□□□□ -0.28
YKR040CYKR040C RXT2P38255 430 aa13.31□□□□□ -0.28
YKR040CYKR040C PAN5P38787 379 aa13.31□□□□□ -0.28
YKR040CYKR040C CCT3P39077 534 aaKnown RBP13.31□□□□□ -0.28
YKR040CYKR040C PCI8P40512 444 aa13.31□□□□□ -0.28
YKR040CYKR040C AIM21P40563 679 aa13.31□□□□□ -0.28
YKR040CYKR040C VPS53P47061 822 aa13.31□□□□□ -0.28
YKR040CYKR040C YGL039WP53183 348 aaKnown RBP13.31□□□□□ -0.28
YKR040CYKR040C YLR326WQ06170 240 aaKnown RBP13.31□□□□□ -0.28
YKR040CYKR040C MYO1P08964 1928 aa13.31□□□□□ -0.28
YKR040CYKR040C DBP1P24784 617 aaKnown RBP13.3□□□□□ -0.28
YKR040CYKR040C YUR1P26725 428 aa13.3□□□□□ -0.28
YKR040CYKR040C UBP10P53874 792 aaPredicted RBP13.3□□□□□ -0.28
YKR040CYKR040C GDE1Q02979 1223 aa13.3□□□□□ -0.28
YKR040CYKR040C YDR461C-AQ2V2P7 80 aa13.3□□□□□ -0.28
YKR040CYKR040C BCS1P32839 456 aa13.29□□□□□ -0.28
YKR040CYKR040C DBP7P36120 742 aaKnown RBP13.29□□□□□ -0.28
YKR040CYKR040C OXR1Q08952 273 aa13.29□□□□□ -0.28
YKR040CYKR040C MAM3Q12296 706 aa13.29□□□□□ -0.28
YKR040CYKR040C MDM20Q12387 796 aaKnown RBP13.29□□□□□ -0.28
YKR040CYKR040C ECM29P38737 1868 aa13.29□□□□□ -0.28
YKR040CYKR040C RPN10P38886 268 aaKnown RBP13.28□□□□□ -0.28
YKR040CYKR040C AFG3P39925 761 aa13.28□□□□□ -0.28
YKR040CYKR040C PTA1Q01329 785 aaPredicted RBP13.28□□□□□ -0.28
YKR040CYKR040C GIS4Q04233 774 aa13.28□□□□□ -0.28
YKR040CYKR040C SMD2Q06217 110 aaKnown RBP13.28□□□□□ -0.28
YKR040CYKR040C TRM11Q12463 433 aa13.28□□□□□ -0.28
YKR040CYKR040C MAK11P20484 414 aaKnown RBP13.27□□□□□ -0.29
YKR040CYKR040C UIP5P36137 443 aa13.27□□□□□ -0.29
YKR040CYKR040C SUL1P38359 859 aa13.27□□□□□ -0.29
YKR040CYKR040C KSP1P38691 1029 aaKnown RBP13.27□□□□□ -0.29
YKR040CYKR040C YHL017WP38745 532 aa13.27□□□□□ -0.29
YKR040CYKR040C YMR321CQ04898 105 aa13.27□□□□□ -0.29
YKR040CYKR040C YLR407WQ06070 228 aa13.27□□□□□ -0.29
YKR040CYKR040C SES1P07284 462 aaKnown RBP13.26□□□□□ -0.29
YKR040CYKR040C ENT3P47160 408 aa13.26□□□□□ -0.29
YKR040CYKR040C CTR1P49573 406 aa13.26□□□□□ -0.29
YKR040CYKR040C CTF18P49956 741 aa13.26□□□□□ -0.29
YKR040CYKR040C SCS3P53012 380 aa13.26□□□□□ -0.29
YKR040CYKR040C YGL138CP53122 345 aa13.26□□□□□ -0.29
YKR040CYKR040C PSK2Q08217 1101 aa13.26□□□□□ -0.29
YKR040CYKR040C ARP6Q12509 438 aa13.26□□□□□ -0.29
YKR040CYKR040C PDC1P06169 563 aaKnown RBP13.25□□□□□ -0.29
YKR040CYKR040C NOC2P39744 710 aaKnown RBP13.25□□□□□ -0.29
YKR040CYKR040C BUD6P41697 788 aa13.25□□□□□ -0.29
YKR040CYKR040C SKP2P42843 763 aa13.25□□□□□ -0.29
YKR040CYKR040C POX1P13711 748 aa13.24□□□□□ -0.29
YKR040CYKR040C CBP3P21560 335 aa13.24□□□□□ -0.29
YKR040CYKR040C TIM23P32897 222 aa13.24□□□□□ -0.29
YKR040CYKR040C BNI5P53890 448 aaKnown RBP13.24□□□□□ -0.29
YKR040CYKR040C RLF2Q12495 606 aa13.24□□□□□ -0.29
YKR040CYKR040C RPL19AP0CX82 189 aaKnown RBP13.23□□□□□ -0.29
YKR040CYKR040C RPL19BP0CX83 189 aaPredicted RBP13.23□□□□□ -0.29
YKR040CYKR040C SAS3P34218 831 aa13.23□□□□□ -0.29
YKR040CYKR040C UBP15P50101 1230 aa13.23□□□□□ -0.29
YKR040CYKR040C CSM3Q04659 317 aa13.23□□□□□ -0.29
YKR040CYKR040C CEX1Q12453 761 aa13.23□□□□□ -0.29
YKR040CYKR040C ECM30Q06673 1274 aa13.22□□□□□ -0.29
YKR040CYKR040C CDC6P09119 513 aa13.21□□□□□ -0.29
YKR040CYKR040C VPS1P21576 704 aaKnown RBP13.21□□□□□ -0.29
YKR040CYKR040C SRO9P25567 434 aaKnown RBP13.21□□□□□ -0.29
YKR040CYKR040C GPT2P36148 743 aa13.21□□□□□ -0.29
YKR040CYKR040C HUL5P53119 910 aa13.21□□□□□ -0.29
YKR040CYKR040C YGR273CP53329 174 aa13.21□□□□□ -0.29
YKR040CYKR040C NAF1P53919 492 aaKnown RBP13.21□□□□□ -0.29
YKR040CYKR040C ORC4P54791 529 aa13.21□□□□□ -0.29
YKR040CYKR040C YPL034WQ03083 165 aa13.21□□□□□ -0.29
YKR040CYKR040C HSP82P02829 709 aaKnown RBP13.2□□□□□ -0.3
YKR040CYKR040C KTR2P33550 425 aa13.2□□□□□ -0.3
YKR040CYKR040C DAK1P54838 584 aaKnown RBP13.2□□□□□ -0.3
YKR040CYKR040C OYE2Q03558 400 aaKnown RBP13.2□□□□□ -0.3
YKR040CYKR040C WHI4Q07655 649 aaKnown RBP13.2□□□□□ -0.3
YKR040CYKR040C CLB5P30283 435 aa13.19□□□□□ -0.3
YKR040CYKR040C ISW1P38144 1129 aa13.19□□□□□ -0.3
YKR040CYKR040C ORC6P38826 435 aa13.19□□□□□ -0.3
YKR040CYKR040C RET3P53600 189 aa13.19□□□□□ -0.3
YKR040CYKR040C DSE4P53753 1117 aa13.19□□□□□ -0.3
YKR040CYKR040C ELG1Q12050 791 aa13.19□□□□□ -0.3
Retrieved 100 of 5,963 RNA–protein pairs in 42.7 ms