RNA–Protein interactions for RNA: YJR104C

SOD1, Transcript of Cytosolic copper-zinc superoxide dismutase, yeast

Gene SOD1, Length 465 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SOD1	YJR104C	TY1A-DR1	Q03856	440 aa		4.1	□□□□□ -1.75
SOD1	YJR104C	TY1A-ML1	Q04706	440 aa	Known RBP	4.1	□□□□□ -1.75
SOD1	YJR104C	RLP24	Q07915	199 aa	Known RBP	4.1	□□□□□ -1.75
SOD1	YJR104C	ETT1	Q08421	412 aa	Known RBP	4.1	□□□□□ -1.75
SOD1	YJR104C	TY1A-BR	Q12217	440 aa		4.1	□□□□□ -1.75
SOD1	YJR104C	TY1A-NL2	Q12470	440 aa		4.1	□□□□□ -1.75
SOD1	YJR104C	TY1A-GR2	Q12485	440 aa		4.1	□□□□□ -1.75
SOD1	YJR104C	NOP14	Q99207	810 aa	Known RBP	4.1	□□□□□ -1.75
SOD1	YJR104C	SEC2	P17065	759 aa		4.09	□□□□□ -1.75
SOD1	YJR104C	TEC1	P18412	486 aa		4.09	□□□□□ -1.75
SOD1	YJR104C	CLB1	P24868	471 aa		4.09	□□□□□ -1.75
SOD1	YJR104C	DEP1	P31385	405 aa		4.09	□□□□□ -1.75
SOD1	YJR104C	SWI3	P32591	825 aa		4.09	□□□□□ -1.75
SOD1	YJR104C	BCS1	P32839	456 aa		4.09	□□□□□ -1.75
SOD1	YJR104C	RPS0A	P32905	252 aa	Known RBP	4.09	□□□□□ -1.75
SOD1	YJR104C	ECM1	P39715	212 aa		4.09	□□□□□ -1.75
SOD1	YJR104C	YTA12	P40341	825 aa		4.09	□□□□□ -1.75
SOD1	YJR104C	GSM1	P42950	618 aa		4.09	□□□□□ -1.75
SOD1	YJR104C	KIP3	P53086	805 aa	Known RBP	4.09	□□□□□ -1.75
SOD1	YJR104C	UBX2	Q04228	584 aa		4.09	□□□□□ -1.75
SOD1	YJR104C	AGE1	Q04412	482 aa		4.09	□□□□□ -1.75
SOD1	YJR104C	RPN7	Q06103	429 aa	Known RBP	4.09	□□□□□ -1.75
SOD1	YJR104C	YPR097W	Q06839	1073 aa		4.09	□□□□□ -1.75
SOD1	YJR104C	NOP8	Q08287	484 aa	Predicted RBP	4.09	□□□□□ -1.75
SOD1	YJR104C	HAT1	Q12341	374 aa		4.09	□□□□□ -1.75
SOD1	YJR104C	RAD2	P07276	1031 aa		4.08	□□□□□ -1.76
SOD1	YJR104C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
SOD1	YJR104C	CHL1	P22516	861 aa	Predicted RBP	4.08	□□□□□ -1.76
SOD1	YJR104C	ISF1	P32488	338 aa		4.08	□□□□□ -1.76
SOD1	YJR104C	UTP20	P35194	2493 aa	Known RBP	4.08	□□□□□ -1.76
SOD1	YJR104C	PAC1	P39946	494 aa	Known RBP	4.08	□□□□□ -1.76
SOD1	YJR104C	SLX8	P40072	274 aa		4.08	□□□□□ -1.76
SOD1	YJR104C	ATG3	P40344	310 aa		4.08	□□□□□ -1.76
SOD1	YJR104C	FOL2	P51601	243 aa	Known RBP	4.08	□□□□□ -1.76
SOD1	YJR104C	HOS3	Q02959	697 aa	Known RBP	4.08	□□□□□ -1.76
SOD1	YJR104C	STE20	Q03497	939 aa	Known RBP	4.08	□□□□□ -1.76
SOD1	YJR104C	PRP42	Q03776	544 aa	Known RBP	4.08	□□□□□ -1.76
SOD1	YJR104C	YML082W	Q04533	649 aa	Known RBP	4.08	□□□□□ -1.76
SOD1	YJR104C	MRX10	Q05648	414 aa		4.08	□□□□□ -1.76
SOD1	YJR104C	YSH1	Q06224	779 aa	Predicted RBP	4.08	□□□□□ -1.76
SOD1	YJR104C	GYP1	Q08484	637 aa		4.08	□□□□□ -1.76
SOD1	YJR104C	RVB2	Q12464	471 aa	Known RBP	4.08	□□□□□ -1.76
SOD1	YJR104C	PET111	P08468	800 aa		4.07	□□□□□ -1.76
SOD1	YJR104C	RPS7A	P26786	190 aa	Known RBP	4.07	□□□□□ -1.76
SOD1	YJR104C	GUT2	P32191	649 aa		4.07	□□□□□ -1.76
SOD1	YJR104C	HXT5	P38695	592 aa		4.07	□□□□□ -1.76
SOD1	YJR104C	KTR7	P40504	517 aa		4.07	□□□□□ -1.76
SOD1	YJR104C	HUL4	P40985	892 aa		4.07	□□□□□ -1.76
SOD1	YJR104C	NOP7	P53261	605 aa	Known RBP	4.07	□□□□□ -1.76
SOD1	YJR104C	LCD1	Q04377	747 aa		4.07	□□□□□ -1.76
SOD1	YJR104C	COG8	Q04632	607 aa		4.07	□□□□□ -1.76
SOD1	YJR104C	BMS1	Q08965	1183 aa	Known RBP	4.07	□□□□□ -1.76
SOD1	YJR104C	PIN2	Q12057	282 aa		4.07	□□□□□ -1.76
SOD1	YJR104C	YPR015C	Q12531	247 aa		4.07	□□□□□ -1.76
SOD1	YJR104C	PDC1	P06169	563 aa	Known RBP	4.06	□□□□□ -1.76
SOD1	YJR104C	HEM1	P09950	548 aa	Predicted RBP	4.06	□□□□□ -1.76
SOD1	YJR104C	TGL4	P36165	910 aa		4.06	□□□□□ -1.76
SOD1	YJR104C	TPS3	P38426	1054 aa	Known RBP	4.06	□□□□□ -1.76
SOD1	YJR104C	YML020W	Q03722	664 aa		4.06	□□□□□ -1.76
SOD1	YJR104C	GRX3	Q03835	250 aa		4.06	□□□□□ -1.76
SOD1	YJR104C	PDS5	Q04264	1277 aa		4.06	□□□□□ -1.76
SOD1	YJR104C	IRC10	Q08118	586 aa		4.06	□□□□□ -1.76
SOD1	YJR104C	NOB1	Q08444	459 aa	Known RBP	4.06	□□□□□ -1.76
SOD1	YJR104C	MET7	Q08645	548 aa		4.06	□□□□□ -1.76
SOD1	YJR104C	AUS1	Q08409	1394 aa		4.05	□□□□□ -1.76
SOD1	YJR104C	PUP1	P25043	261 aa		4.05	□□□□□ -1.76
SOD1	YJR104C	OCT1	P35999	772 aa		4.05	□□□□□ -1.76
SOD1	YJR104C	MCD4	P36051	919 aa		4.05	□□□□□ -1.76
SOD1	YJR104C	SAP190	P36123	1033 aa		4.05	□□□□□ -1.76
SOD1	YJR104C	KEL1	P38853	1164 aa	Known RBP	4.05	□□□□□ -1.76
SOD1	YJR104C	FIG4	P42837	879 aa		4.05	□□□□□ -1.76
SOD1	YJR104C	HXT10	P43581	546 aa		4.05	□□□□□ -1.76
SOD1	YJR104C	VPS30	Q02948	557 aa		4.05	□□□□□ -1.76
SOD1	YJR104C	VPS72	Q03388	795 aa		4.05	□□□□□ -1.76
SOD1	YJR104C	IOC4	Q04213	475 aa		4.05	□□□□□ -1.76
SOD1	YJR104C	RRP15	Q06511	250 aa	Predicted RBP	4.05	□□□□□ -1.76
SOD1	YJR104C	SSP2	Q08646	371 aa		4.05	□□□□□ -1.76
SOD1	YJR104C	YVC1	Q12324	675 aa		4.05	□□□□□ -1.76
SOD1	YJR104C	YDR524C-B	Q3E6R4	66 aa		4.05	□□□□□ -1.76
SOD1	YJR104C	YOL087C	Q99247	1116 aa		4.05	□□□□□ -1.76
SOD1	YJR104C	PRP8	P33334	2413 aa	Known RBP	4.04	□□□□□ -1.76
SOD1	YJR104C	SRS2	P12954	1174 aa		4.04	□□□□□ -1.76
SOD1	YJR104C	PDI1	P17967	522 aa	Known RBP	4.04	□□□□□ -1.76
SOD1	YJR104C	RAD51	P25454	400 aa		4.04	□□□□□ -1.76
SOD1	YJR104C	PPZ1	P26570	692 aa		4.04	□□□□□ -1.76
SOD1	YJR104C	CDC3	P32457	520 aa	Known RBP	4.04	□□□□□ -1.76
SOD1	YJR104C	STU2	P46675	888 aa		4.04	□□□□□ -1.76
SOD1	YJR104C	YNL050C	P53952	270 aa		4.04	□□□□□ -1.76
SOD1	YJR104C	CTF4	Q01454	927 aa		4.04	□□□□□ -1.76
SOD1	YJR104C	MRS2	Q01926	470 aa		4.04	□□□□□ -1.76
SOD1	YJR104C	ECM23	Q02710	187 aa		4.04	□□□□□ -1.76
SOD1	YJR104C	YML083C	Q04526	418 aa		4.04	□□□□□ -1.76
SOD1	YJR104C	FRA1	Q07825	749 aa		4.04	□□□□□ -1.76
SOD1	YJR104C	MDM38	Q08179	573 aa		4.04	□□□□□ -1.76
SOD1	YJR104C	YDR461C-A	Q2V2P7	80 aa		4.04	□□□□□ -1.76
SOD1	YJR104C	MRF1	P30775	413 aa	Predicted RBP	4.03	□□□□□ -1.76
SOD1	YJR104C	ZUO1	P32527	433 aa	Known RBP	4.03	□□□□□ -1.76
SOD1	YJR104C	PEP12	P32854	288 aa		4.03	□□□□□ -1.76
SOD1	YJR104C	SWH1	P35845	1188 aa		4.03	□□□□□ -1.76
SOD1	YJR104C	SPL2	P38839	148 aa		4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms