RNA–Protein interactions for RNA: YJL154C

VPS35, Transcript of Endosomal subunit of membrane-associated retromer complex, yeastyeast

Gene VPS35, Length 2,835 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS35YJL154C NAB6Q03735 1134 aaKnown RBP RIP-Chip data3.05□□□□□ -1.92not detected
VPS35YJL154C YDL176WQ12027 708 aa3.05□□□□□ -1.92
VPS35YJL154C STI1P15705 589 aaKnown RBP RIP-Chip data3.04□□□□□ -1.92not detected
VPS35YJL154C GRX1P25373 110 aaKnown RBP3.04□□□□□ -1.92
VPS35YJL154C NFS1P25374 497 aa3.04□□□□□ -1.92
VPS35YJL154C SYP1P25623 870 aaKnown RBP3.04□□□□□ -1.92
VPS35YJL154C PPG1P32838 368 aa3.04□□□□□ -1.92
VPS35YJL154C SPO75Q07798 868 aa3.04□□□□□ -1.92
VPS35YJL154C TY4B-PA0A0B7P3V8 1104 aa3.04□□□□□ -1.92
VPS35YJL154C INO1P11986 533 aa3.04□□□□□ -1.92
VPS35YJL154C RAD4P14736 754 aa3.04□□□□□ -1.92
VPS35YJL154C SCT1P32784 759 aa3.04□□□□□ -1.92
VPS35YJL154C POL5P39985 1022 aaKnown RBP3.04□□□□□ -1.92
VPS35YJL154C SPO74P45819 413 aa3.04□□□□□ -1.92
VPS35YJL154C KIP3P53086 805 aaKnown RBP3.04□□□□□ -1.92
VPS35YJL154C YGR053CP53234 283 aa3.04□□□□□ -1.92
VPS35YJL154C RKM2Q03942 479 aa3.04□□□□□ -1.92
VPS35YJL154C DOT1Q04089 582 aaKnown RBP3.04□□□□□ -1.92
VPS35YJL154C TY4A-HQ6Q5P6 413 aa3.04□□□□□ -1.92
VPS35YJL154C DUT1P33317 147 aa3.03□□□□□ -1.92
VPS35YJL154C YKL107WP34251 309 aa3.03□□□□□ -1.92
VPS35YJL154C MOT2P34909 587 aaKnown RBP3.03□□□□□ -1.92
VPS35YJL154C RER2P35196 286 aa3.03□□□□□ -1.92
VPS35YJL154C VPS53P47061 822 aa3.03□□□□□ -1.92
VPS35YJL154C ELA1P53861 379 aaPredicted RBP3.03□□□□□ -1.92
VPS35YJL154C PTC5Q12511 572 aa3.03□□□□□ -1.92
VPS35YJL154C ERS1P17261 260 aa3.03□□□□□ -1.92
VPS35YJL154C MKK2P32491 506 aa3.03□□□□□ -1.92
VPS35YJL154C MRP8P35719 219 aa3.03□□□□□ -1.92
VPS35YJL154C CNN1P43618 361 aa3.03□□□□□ -1.92
VPS35YJL154C HNT2P49775 206 aa3.03□□□□□ -1.92
VPS35YJL154C NSE3Q05541 303 aa3.03□□□□□ -1.92
VPS35YJL154C YLR225CQ05948 407 aaKnown RBP3.03□□□□□ -1.92
VPS35YJL154C THI72Q08579 599 aa3.03□□□□□ -1.92
VPS35YJL154C REC8Q12188 680 aa3.03□□□□□ -1.92
VPS35YJL154C SBA1P28707 216 aaKnown RBP3.02□□□□□ -1.93
VPS35YJL154C ABD1P32783 436 aaPredicted RBP3.02□□□□□ -1.93
VPS35YJL154C RDH54P38086 958 aa3.02□□□□□ -1.93
VPS35YJL154C SPF1P39986 1215 aaKnown RBP3.02□□□□□ -1.93
VPS35YJL154C TPO2P53283 614 aa3.02□□□□□ -1.93
VPS35YJL154C EEB1Q02891 456 aa3.02□□□□□ -1.93
VPS35YJL154C HRK1Q08732 759 aaKnown RBP3.02□□□□□ -1.93
VPS35YJL154C RKM4Q12504 494 aa3.02□□□□□ -1.93
VPS35YJL154C RSC6P25632 483 aa3.02□□□□□ -1.93
VPS35YJL154C ALG3P38179 458 aa3.02□□□□□ -1.93
VPS35YJL154C NSG2P53898 299 aa3.02□□□□□ -1.93
VPS35YJL154C RAT1Q02792 1006 aaKnown RBP3.02□□□□□ -1.93
VPS35YJL154C DBP5P20449 482 aaKnown RBP3.01□□□□□ -1.93
VPS35YJL154C AGP1P25376 633 aa3.01□□□□□ -1.93
VPS35YJL154C TRK2P28584 889 aa3.01□□□□□ -1.93
VPS35YJL154C PIN4P34217 668 aaKnown RBP RIP-Chip data3.01□□□□□ -1.93not detected
VPS35YJL154C YGR045CP53229 120 aa3.01□□□□□ -1.93
VPS35YJL154C SPP382Q06411 708 aaPredicted RBP3.01□□□□□ -1.93
VPS35YJL154C AOS1Q06624 347 aa3.01□□□□□ -1.93
VPS35YJL154C PRP9P19736 530 aaKnown RBP3.01□□□□□ -1.93
VPS35YJL154C NNK1P36003 928 aa3.01□□□□□ -1.93
VPS35YJL154C RGD1P38339 666 aa3.01□□□□□ -1.93
VPS35YJL154C SBE2P42223 864 aaKnown RBP3.01□□□□□ -1.93
VPS35YJL154C YGL176CP46945 554 aa3.01□□□□□ -1.93
VPS35YJL154C GNP1P48813 663 aa3.01□□□□□ -1.93
VPS35YJL154C TIF35Q04067 274 aaKnown RBP3.01□□□□□ -1.93
VPS35YJL154C PUF4P25339 888 aaKnown RBP RIP-Chip data3.01□□□□□ -1.93not detected
VPS35YJL154C YKL069WP36088 180 aa3.01□□□□□ -1.93
VPS35YJL154C HUL5P53119 910 aa3.01□□□□□ -1.93
VPS35YJL154C YGR125WP53273 1036 aa3.01□□□□□ -1.93
VPS35YJL154C HEM13P11353 328 aaKnown RBP3□□□□□ -1.93
VPS35YJL154C GAL11P19659 1081 aa3□□□□□ -1.93
VPS35YJL154C HSP60P19882 572 aaKnown RBP3□□□□□ -1.93
VPS35YJL154C ARE1P25628 610 aa3□□□□□ -1.93
VPS35YJL154C MLS1P30952 554 aa3□□□□□ -1.93
VPS35YJL154C GPT2P36148 743 aa3□□□□□ -1.93
VPS35YJL154C PBY1P38254 753 aa3□□□□□ -1.93
VPS35YJL154C HXT13P39924 564 aa3□□□□□ -1.93
VPS35YJL154C IRR1P40541 1150 aa3□□□□□ -1.93
VPS35YJL154C ERP6P53198 216 aa3□□□□□ -1.93
VPS35YJL154C HXT17P53631 564 aa3□□□□□ -1.93
VPS35YJL154C HXT15P54854 567 aa3□□□□□ -1.93
VPS35YJL154C SHE9Q04172 456 aa3□□□□□ -1.93
VPS35YJL154C YLR257WQ06146 321 aaKnown RBP3□□□□□ -1.93
VPS35YJL154C NSI1Q12457 570 aa3□□□□□ -1.93
VPS35YJL154C RET1P22276 1149 aaKnown RBP3□□□□□ -1.93
VPS35YJL154C SFA1P32771 386 aa3□□□□□ -1.93
VPS35YJL154C VBA5P36172 582 aa3□□□□□ -1.93
VPS35YJL154C YBR184WP38299 523 aa3□□□□□ -1.93
VPS35YJL154C NMD2P38798 1089 aaKnown RBP3□□□□□ -1.93
VPS35YJL154C HUL4P40985 892 aa3□□□□□ -1.93
VPS35YJL154C IOC3P43596 787 aa3□□□□□ -1.93
VPS35YJL154C RSA3Q05942 220 aaKnown RBP3□□□□□ -1.93
VPS35YJL154C EAF1Q06337 982 aa3□□□□□ -1.93
VPS35YJL154C BDF2Q07442 638 aa3□□□□□ -1.93
VPS35YJL154C YPL260WQ08977 551 aa3□□□□□ -1.93
VPS35YJL154C SPO21Q12411 609 aa3□□□□□ -1.93
VPS35YJL154C SWR1Q05471 1514 aa3□□□□□ -1.93
VPS35YJL154C COQ2P32378 372 aa2.99□□□□□ -1.93
VPS35YJL154C SMY2P32909 740 aaKnown RBP2.99□□□□□ -1.93
VPS35YJL154C TAT1P38085 619 aa2.99□□□□□ -1.93
VPS35YJL154C BRN1P38170 754 aa2.99□□□□□ -1.93
VPS35YJL154C QNS1P38795 714 aaKnown RBP2.99□□□□□ -1.93
VPS35YJL154C TPP1Q03796 238 aa2.99□□□□□ -1.93
VPS35YJL154C TDA6Q06466 467 aa2.99□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms