RNA–Protein interactions for RNA: YHR200W

RPN10, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN10, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN10YHR200W STI1P15705 589 aaKnown RBP RIP-Chip data15.66■□□□□ 0.1not detected
RPN10YHR200W THR4P16120 514 aaKnown RBP15.66■□□□□ 0.1
RPN10YHR200W DID4P36108 232 aa15.66■□□□□ 0.1
RPN10YHR200W BNI5P53890 448 aaKnown RBP15.66■□□□□ 0.1
RPN10YHR200W GIS4Q04233 774 aa15.66■□□□□ 0.1
RPN10YHR200W CSM3Q04659 317 aa15.66■□□□□ 0.1
RPN10YHR200W YOR296WQ08748 1289 aa15.66■□□□□ 0.1
RPN10YHR200W ARP8Q12386 881 aaKnown RBP RIP-Chip data15.66■□□□□ 0.1not detected
RPN10YHR200W VPS1P21576 704 aaKnown RBP15.65■□□□□ 0.1
RPN10YHR200W OCT1P35999 772 aa15.65■□□□□ 0.1
RPN10YHR200W LYS14P40971 790 aa15.65■□□□□ 0.1
RPN10YHR200W RET3P53600 189 aa15.65■□□□□ 0.1
RPN10YHR200W TYW1Q08960 810 aaKnown RBP15.65■□□□□ 0.1
RPN10YHR200W TAF13P11747 167 aa15.64■□□□□ 0.09
RPN10YHR200W ALG1P16661 449 aa15.64■□□□□ 0.09
RPN10YHR200W MCM3P24279 971 aaKnown RBP15.64■□□□□ 0.09
RPN10YHR200W YPT11P48559 417 aa15.64■□□□□ 0.09
RPN10YHR200W KRE33P53914 1056 aaKnown RBP15.64■□□□□ 0.09
RPN10YHR200W SMD2Q06217 110 aaKnown RBP15.64■□□□□ 0.09
RPN10YHR200W PER1P25625 357 aa15.63■□□□□ 0.09
RPN10YHR200W VAB2P40003 282 aa15.63■□□□□ 0.09
RPN10YHR200W CUE3P53137 624 aaKnown RBP15.63■□□□□ 0.09
RPN10YHR200W UTP4Q06679 776 aaKnown RBP15.63■□□□□ 0.09
RPN10YHR200W SRO9P25567 434 aaKnown RBP15.62■□□□□ 0.09
RPN10YHR200W LCD1Q04377 747 aa15.61■□□□□ 0.09
RPN10YHR200W EIS1Q05050 843 aaKnown RBP15.61■□□□□ 0.09
RPN10YHR200W URA1P28272 314 aaPredicted RBP15.6■□□□□ 0.09
RPN10YHR200W BMH1P29311 267 aaKnown RBP15.6■□□□□ 0.09
RPN10YHR200W NPR3P38742 1146 aa15.6■□□□□ 0.09
RPN10YHR200W ASE1P50275 885 aa15.6■□□□□ 0.09
RPN10YHR200W DSE4P53753 1117 aa15.6■□□□□ 0.09
RPN10YHR200W YML037CQ03703 340 aa15.6■□□□□ 0.09
RPN10YHR200W MMR1Q06324 491 aa15.6■□□□□ 0.09
RPN10YHR200W KRS1P15180 591 aaKnown RBP15.59■□□□□ 0.09
RPN10YHR200W YKR018CP36114 725 aa15.59■□□□□ 0.09
RPN10YHR200W RKM3P38222 552 aa15.59■□□□□ 0.09
RPN10YHR200W RRM3P38766 723 aa15.59■□□□□ 0.09
RPN10YHR200W STT3P39007 718 aaKnown RBP15.59■□□□□ 0.09
RPN10YHR200W YER130CP39959 443 aa15.59■□□□□ 0.09
RPN10YHR200W YIL089WP40500 205 aa15.59■□□□□ 0.09
RPN10YHR200W RSC1P53236 928 aa15.59■□□□□ 0.09
RPN10YHR200W SGD1Q06132 899 aa15.59■□□□□ 0.09
RPN10YHR200W SLK19Q08581 821 aaKnown RBP15.59■□□□□ 0.09
RPN10YHR200W TRS120Q04183 1289 aa15.58■□□□□ 0.08
RPN10YHR200W GPA1P08539 472 aa15.57■□□□□ 0.08
RPN10YHR200W KNS1P32350 737 aaPredicted RBP15.57■□□□□ 0.08
RPN10YHR200W FMS1P50264 508 aa15.57■□□□□ 0.08
RPN10YHR200W YAF9P53930 226 aa15.57■□□□□ 0.08
RPN10YHR200W PTC5Q12511 572 aa15.57■□□□□ 0.08
RPN10YHR200W TRS33Q99394 268 aa15.57■□□□□ 0.08
RPN10YHR200W HIS4P00815 799 aaKnown RBP15.56■□□□□ 0.08
RPN10YHR200W SES1P07284 462 aaKnown RBP15.56■□□□□ 0.08
RPN10YHR200W PHO88P38264 188 aaPredicted RBP15.56■□□□□ 0.08
RPN10YHR200W MYO1P08964 1928 aa15.55■□□□□ 0.08
RPN10YHR200W RAD18P10862 487 aa15.55■□□□□ 0.08
RPN10YHR200W MCD4P36051 919 aa15.55■□□□□ 0.08
RPN10YHR200W DAK2P43550 591 aa15.55■□□□□ 0.08
RPN10YHR200W NET1P47035 1189 aa15.55■□□□□ 0.08
RPN10YHR200W SDA1P53313 767 aaKnown RBP15.55■□□□□ 0.08
RPN10YHR200W SUE1Q06524 206 aa15.55■□□□□ 0.08
RPN10YHR200W BSD2P38356 321 aa15.54■□□□□ 0.08
RPN10YHR200W PAN5P38787 379 aa15.54■□□□□ 0.08
RPN10YHR200W OYE2Q03558 400 aaKnown RBP15.54■□□□□ 0.08
RPN10YHR200W GSY1P23337 708 aa15.53■□□□□ 0.08
RPN10YHR200W MCM4P30665 933 aaKnown RBP15.53■□□□□ 0.08
RPN10YHR200W PCS60P38137 543 aaKnown RBP RIP-Chip data15.53■□□□□ 0.08not detected
RPN10YHR200W PNT1P38969 423 aa15.53■□□□□ 0.08
RPN10YHR200W ALD6P54115 500 aaKnown RBP15.53■□□□□ 0.08
RPN10YHR200W MFM1Q02783 413 aa15.53■□□□□ 0.08
RPN10YHR200W PEX29Q03370 554 aa15.53■□□□□ 0.08
RPN10YHR200W BUL2Q03758 920 aaKnown RBP15.53■□□□□ 0.08
RPN10YHR200W SAC6P32599 642 aaKnown RBP15.52■□□□□ 0.08
RPN10YHR200W SUL1P38359 859 aa15.52■□□□□ 0.08
RPN10YHR200W ETP1P38748 585 aaKnown RBP15.52■□□□□ 0.08
RPN10YHR200W YGR153WP48238 217 aa15.52■□□□□ 0.08
RPN10YHR200W VMS1Q04311 632 aaKnown RBP15.52■□□□□ 0.08
RPN10YHR200W TUF1P02992 437 aaKnown RBP15.51■□□□□ 0.07
RPN10YHR200W FBP1P09201 348 aa15.51■□□□□ 0.07
RPN10YHR200W MRPL10P36520 322 aa15.51■□□□□ 0.07
RPN10YHR200W CIT3P43635 486 aa15.51■□□□□ 0.07
RPN10YHR200W LIF1P53150 421 aa15.51■□□□□ 0.07
RPN10YHR200W YLH47Q06493 454 aa15.51■□□□□ 0.07
RPN10YHR200W TY1B-AO13527 1196 aaKnown RBP15.5■□□□□ 0.07
RPN10YHR200W CKA2P19454 339 aa15.5■□□□□ 0.07
RPN10YHR200W MIC60P36112 540 aa15.5■□□□□ 0.07
RPN10YHR200W ISW1P38144 1129 aa15.5■□□□□ 0.07
RPN10YHR200W YJL007CP47080 104 aa15.5■□□□□ 0.07
RPN10YHR200W UBX5Q06682 500 aa15.5■□□□□ 0.07
RPN10YHR200W GUD1Q07729 489 aa15.5■□□□□ 0.07
RPN10YHR200W SMC6Q12749 1114 aa15.5■□□□□ 0.07
RPN10YHR200W GPB2P39717 880 aa15.49■□□□□ 0.07
RPN10YHR200W ATG32P40458 529 aa15.49■□□□□ 0.07
RPN10YHR200W TFG2P41896 400 aaPredicted RBP15.49■□□□□ 0.07
RPN10YHR200W UBA2P52488 636 aa15.49■□□□□ 0.07
RPN10YHR200W FOB1O13329 566 aa15.48■□□□□ 0.07
RPN10YHR200W ATE1P16639 503 aa15.48■□□□□ 0.07
RPN10YHR200W CDC15P27636 974 aa15.48■□□□□ 0.07
RPN10YHR200W HIR1P32479 840 aa15.48■□□□□ 0.07
RPN10YHR200W UGA4P32837 571 aa15.48■□□□□ 0.07
RPN10YHR200W EBP2P36049 427 aaKnown RBP15.48■□□□□ 0.07
Retrieved 100 of 5,963 RNA–protein pairs in 17 ms