RNA–Protein interactions for RNA: YHR066W

SSF1, Transcript of Constituent of 66S pre-ribosomal particles, yeastyeast

Gene SSF1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF1YHR066W GPT2P36148 743 aa4.4□□□□□ -1.71
SSF1YHR066W SEA4P38164 1038 aa4.4□□□□□ -1.71
SSF1YHR066W YGR045CP53229 120 aa4.4□□□□□ -1.71
SSF1YHR066W YCR015CP25616 317 aa4.39□□□□□ -1.71
SSF1YHR066W XKS1P42826 600 aa4.39□□□□□ -1.71
SSF1YHR066W MTR4P47047 1073 aaKnown RBP4.39□□□□□ -1.71
SSF1YHR066W ELA1P53861 379 aaPredicted RBP4.39□□□□□ -1.71
SSF1YHR066W GCR1P07261 785 aa4.38□□□□□ -1.71
SSF1YHR066W GNP1P48813 663 aa4.38□□□□□ -1.71
SSF1YHR066W RMD1Q03441 430 aa4.38□□□□□ -1.71
SSF1YHR066W HDA2Q06629 674 aa4.38□□□□□ -1.71
SSF1YHR066W GIC2Q06648 383 aa4.38□□□□□ -1.71
SSF1YHR066W SCP160P06105 1222 aaKnown RBP RIP-Chip data4.37□□□□□ -1.71not detected
SSF1YHR066W SEG2P34250 1132 aa4.37□□□□□ -1.71
SSF1YHR066W MSH4P40965 878 aaPredicted RBP4.37□□□□□ -1.71
SSF1YHR066W AVO1Q08236 1176 aa4.37□□□□□ -1.71
SSF1YHR066W LRG1P35688 1017 aa4.36□□□□□ -1.71
SSF1YHR066W YAR028WP39548 234 aa4.36□□□□□ -1.71
SSF1YHR066W HXT13P39924 564 aa4.36□□□□□ -1.71
SSF1YHR066W SNU71P53207 620 aaKnown RBP4.36□□□□□ -1.71
SSF1YHR066W HXT17P53631 564 aa4.36□□□□□ -1.71
SSF1YHR066W YNR063WP53749 607 aa4.36□□□□□ -1.71
SSF1YHR066W HXT15P54854 567 aa4.36□□□□□ -1.71
SSF1YHR066W EST2Q06163 884 aa4.36□□□□□ -1.71
SSF1YHR066W TAF13P11747 167 aa4.35□□□□□ -1.71
SSF1YHR066W AFG2P32794 780 aa4.35□□□□□ -1.71
SSF1YHR066W YKL222CP35995 705 aa4.35□□□□□ -1.71
SSF1YHR066W ADD66P36040 267 aa4.35□□□□□ -1.71
SSF1YHR066W PAM1P37304 830 aaKnown RBP4.35□□□□□ -1.71
SSF1YHR066W ALT1P52893 592 aa4.35□□□□□ -1.71
SSF1YHR066W ROD1Q02805 837 aa4.35□□□□□ -1.71
SSF1YHR066W EAR1Q03212 550 aa4.35□□□□□ -1.71
SSF1YHR066W MRL1Q06815 381 aa4.35□□□□□ -1.71
SSF1YHR066W DED1P06634 604 aaKnown RBP4.34□□□□□ -1.71
SSF1YHR066W RPS4AP0CX35 261 aaKnown RBP4.34□□□□□ -1.71
SSF1YHR066W RPS4BP0CX36 261 aaKnown RBP4.34□□□□□ -1.71
SSF1YHR066W SMY2P32909 740 aaKnown RBP4.34□□□□□ -1.71
SSF1YHR066W DUT1P33317 147 aa4.34□□□□□ -1.71
SSF1YHR066W PET112P33893 541 aa4.34□□□□□ -1.71
SSF1YHR066W SIW14P53965 281 aa4.34□□□□□ -1.71
SSF1YHR066W GIS1Q03833 894 aa4.34□□□□□ -1.71
SSF1YHR066W RKM2Q03942 479 aa4.34□□□□□ -1.71
SSF1YHR066W RET1P22276 1149 aaKnown RBP4.33□□□□□ -1.72
SSF1YHR066W NFS1P25374 497 aa4.33□□□□□ -1.72
SSF1YHR066W WHI3P34761 661 aaKnown RBP4.33□□□□□ -1.72
SSF1YHR066W NNK1P36003 928 aa4.33□□□□□ -1.72
SSF1YHR066W RAT1Q02792 1006 aaKnown RBP4.33□□□□□ -1.72
SSF1YHR066W RTT10Q08924 1013 aa4.33□□□□□ -1.72
SSF1YHR066W CDC34P14682 295 aa4.32□□□□□ -1.72
SSF1YHR066W MKK2P32491 506 aa4.32□□□□□ -1.72
SSF1YHR066W NMD3P38861 518 aaKnown RBP4.32□□□□□ -1.72
SSF1YHR066W MMM1P41800 426 aa4.32□□□□□ -1.72
SSF1YHR066W SDH1Q00711 640 aa4.32□□□□□ -1.72
SSF1YHR066W SVF1Q05515 481 aa4.32□□□□□ -1.72
SSF1YHR066W RSA3Q05942 220 aaKnown RBP4.32□□□□□ -1.72
SSF1YHR066W YLR257WQ06146 321 aaKnown RBP4.32□□□□□ -1.72
SSF1YHR066W JIP5Q06214 492 aaPredicted RBP4.32□□□□□ -1.72
SSF1YHR066W MSB1P21339 1137 aaKnown RBP4.31□□□□□ -1.72
SSF1YHR066W MNR2P35724 969 aa4.31□□□□□ -1.72
SSF1YHR066W ATG14P38270 344 aa4.31□□□□□ -1.72
SSF1YHR066W QNS1P38795 714 aaKnown RBP4.31□□□□□ -1.72
SSF1YHR066W NIT1P40447 199 aa4.31□□□□□ -1.72
SSF1YHR066W LAP2Q10740 671 aa4.31□□□□□ -1.72
SSF1YHR066W RER2P35196 286 aa4.3□□□□□ -1.72
SSF1YHR066W ALG3P38179 458 aa4.3□□□□□ -1.72
SSF1YHR066W HSE1P38753 452 aa4.3□□□□□ -1.72
SSF1YHR066W MET10P39692 1035 aa4.3□□□□□ -1.72
SSF1YHR066W CIT3P43635 486 aa4.3□□□□□ -1.72
SSF1YHR066W ENT3P47160 408 aa4.3□□□□□ -1.72
SSF1YHR066W EEB1Q02891 456 aa4.3□□□□□ -1.72
SSF1YHR066W VPS16Q03308 798 aa4.3□□□□□ -1.72
SSF1YHR066W ESC8Q08119 714 aa4.3□□□□□ -1.72
SSF1YHR066W PUS7Q08647 676 aaKnown RBP4.3□□□□□ -1.72
SSF1YHR066W YVC1Q12324 675 aa4.3□□□□□ -1.72
SSF1YHR066W POL12P38121 705 aaPredicted RBP4.29□□□□□ -1.72
SSF1YHR066W OYE3P41816 400 aaPredicted RBP4.29□□□□□ -1.72
SSF1YHR066W TAF1P46677 1066 aa4.29□□□□□ -1.72
SSF1YHR066W RCM1P53972 490 aa4.29□□□□□ -1.72
SSF1YHR066W TPP1Q03796 238 aa4.29□□□□□ -1.72
SSF1YHR066W PIN2Q12057 282 aa4.29□□□□□ -1.72
SSF1YHR066W PTC5Q12511 572 aa4.29□□□□□ -1.72
SSF1YHR066W GCD1P09032 578 aaPredicted RBP4.28□□□□□ -1.72
SSF1YHR066W SYP1P25623 870 aaKnown RBP4.28□□□□□ -1.72
SSF1YHR066W YJL045WP47052 634 aa4.28□□□□□ -1.72
SSF1YHR066W VPS53P47061 822 aa4.28□□□□□ -1.72
SSF1YHR066W FAA4P47912 694 aaKnown RBP4.28□□□□□ -1.72
SSF1YHR066W ECL1P48235 211 aa4.28□□□□□ -1.72
SSF1YHR066W CLN2P20438 545 aa4.27□□□□□ -1.73
SSF1YHR066W RAD27P26793 382 aa4.27□□□□□ -1.73
SSF1YHR066W KIP1P28742 1111 aa4.27□□□□□ -1.73
SSF1YHR066W MAD1P40957 749 aa4.27□□□□□ -1.73
SSF1YHR066W YGR053CP53234 283 aa4.27□□□□□ -1.73
SSF1YHR066W NAB6Q03735 1134 aaKnown RBP RIP-Chip data4.27□□□□□ -1.73not detected
SSF1YHR066W TIF35Q04067 274 aaKnown RBP4.27□□□□□ -1.73
SSF1YHR066W YOR059CQ08448 450 aaKnown RBP4.27□□□□□ -1.73
SSF1YHR066W TMA46Q12000 345 aaKnown RBP4.27□□□□□ -1.73
SSF1YHR066W TRP2P00899 507 aaKnown RBP4.27□□□□□ -1.73
SSF1YHR066W DBP5P20449 482 aaKnown RBP4.27□□□□□ -1.73
SSF1YHR066W PEX7P39108 375 aa4.27□□□□□ -1.73
SSF1YHR066W GPB2P39717 880 aa4.27□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 86.4 ms