RNA–Protein interactions for RNA: YGR003W

CUL3, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene CUL3, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUL3YGR003W YKL077WP36081 392 aa2.87□□□□□ -1.95
CUL3YGR003W MNN10P50108 393 aaKnown RBP2.87□□□□□ -1.95
CUL3YGR003W MCM6P53091 1017 aaKnown RBP2.87□□□□□ -1.95
CUL3YGR003W NBA1Q08229 501 aaKnown RBP2.87□□□□□ -1.95
CUL3YGR003W FUR4P05316 633 aaKnown RBP2.87□□□□□ -1.95
CUL3YGR003W CHS7P38843 316 aa2.87□□□□□ -1.95
CUL3YGR003W SAP155P43612 1002 aa2.87□□□□□ -1.95
CUL3YGR003W RSC4Q02206 625 aa2.87□□□□□ -1.95
CUL3YGR003W ROT1Q03691 256 aa2.87□□□□□ -1.95
CUL3YGR003W CYC1P00044 109 aaPredicted RBP2.86□□□□□ -1.95
CUL3YGR003W STE11P23561 717 aa2.86□□□□□ -1.95
CUL3YGR003W SLS1P42900 643 aa2.86□□□□□ -1.95
CUL3YGR003W PMT7Q06644 662 aa2.86□□□□□ -1.95
CUL3YGR003W RSC58Q07979 502 aa2.86□□□□□ -1.95
CUL3YGR003W HSE1P38753 452 aa2.85□□□□□ -1.95
CUL3YGR003W YAF9P53930 226 aa2.85□□□□□ -1.95
CUL3YGR003W DUS4Q06063 367 aa2.85□□□□□ -1.95
CUL3YGR003W RLF2Q12495 606 aa2.85□□□□□ -1.95
CUL3YGR003W MCM5P29496 775 aaKnown RBP2.84□□□□□ -1.95
CUL3YGR003W LST4P34239 828 aa2.84□□□□□ -1.95
CUL3YGR003W RSA3Q05942 220 aaKnown RBP2.84□□□□□ -1.95
CUL3YGR003W TMA10Q06177 86 aa2.84□□□□□ -1.95
CUL3YGR003W SUB2Q07478 446 aaKnown RBP2.84□□□□□ -1.95
CUL3YGR003W PHO23P50947 330 aa2.84□□□□□ -1.96
CUL3YGR003W LAP2Q10740 671 aa2.84□□□□□ -1.96
CUL3YGR003W YJL045WP47052 634 aa2.83□□□□□ -1.96
CUL3YGR003W NUT1P53114 1132 aa2.83□□□□□ -1.96
CUL3YGR003W EXO5P38289 585 aa2.83□□□□□ -1.96
CUL3YGR003W PLB2Q03674 706 aa2.83□□□□□ -1.96
CUL3YGR003W BDF2Q07442 638 aa2.83□□□□□ -1.96
CUL3YGR003W RXT3Q07458 294 aa2.83□□□□□ -1.96
CUL3YGR003W PPM2Q08282 695 aa2.83□□□□□ -1.96
CUL3YGR003W CDC20P26309 610 aa2.82□□□□□ -1.96
CUL3YGR003W NEM1P38757 446 aa2.82□□□□□ -1.96
CUL3YGR003W MTR4P47047 1073 aaKnown RBP2.82□□□□□ -1.96
CUL3YGR003W UFD2P54860 961 aa2.82□□□□□ -1.96
CUL3YGR003W ACK1Q07622 623 aaPredicted RBP2.82□□□□□ -1.96
CUL3YGR003W FLP1P03870 423 aa2.81□□□□□ -1.96
CUL3YGR003W SHU2P38957 223 aa2.81□□□□□ -1.96
CUL3YGR003W KIN4Q01919 800 aa2.81□□□□□ -1.96
CUL3YGR003W YSC84P32793 468 aa2.81□□□□□ -1.96
CUL3YGR003W BOL3P39724 118 aa2.81□□□□□ -1.96
CUL3YGR003W SEC26P41810 973 aaKnown RBP2.81□□□□□ -1.96
CUL3YGR003W ATG14P38270 344 aa2.8□□□□□ -1.96
CUL3YGR003W RVS167P39743 482 aaKnown RBP2.8□□□□□ -1.96
CUL3YGR003W SSA4P22202 642 aaKnown RBP2.8□□□□□ -1.96
CUL3YGR003W BSC2Q05611 235 aa2.8□□□□□ -1.96
CUL3YGR003W PMA1P05030 918 aaKnown RBP2.79□□□□□ -1.96
CUL3YGR003W GPB1Q08886 897 aa2.79□□□□□ -1.96
CUL3YGR003W COQ4O13525 335 aa2.78□□□□□ -1.96
CUL3YGR003W OAR1P35731 278 aa2.78□□□□□ -1.96
CUL3YGR003W DEF1P35732 738 aaKnown RBP2.78□□□□□ -1.96
CUL3YGR003W CCZ1P38273 704 aa2.78□□□□□ -1.96
CUL3YGR003W QNS1P38795 714 aaKnown RBP2.78□□□□□ -1.96
CUL3YGR003W MSS4P38994 779 aa2.78□□□□□ -1.96
CUL3YGR003W ATF1P40353 525 aa2.78□□□□□ -1.96
CUL3YGR003W UBA2P52488 636 aa2.78□□□□□ -1.96
CUL3YGR003W TAF7Q05021 590 aa2.78□□□□□ -1.96
CUL3YGR003W MOH1P38191 138 aa2.78□□□□□ -1.96
CUL3YGR003W YNL011CP53980 444 aa2.78□□□□□ -1.96
CUL3YGR003W UTP5Q04177 643 aaKnown RBP2.78□□□□□ -1.96
CUL3YGR003W RCL1Q08096 367 aaPredicted RBP2.78□□□□□ -1.96
CUL3YGR003W RSB1Q08417 382 aa2.78□□□□□ -1.96
CUL3YGR003W GAL10P04397 699 aa2.77□□□□□ -1.97
CUL3YGR003W PBP1P53297 722 aaKnown RBP2.77□□□□□ -1.97
CUL3YGR003W YNR063WP53749 607 aa2.77□□□□□ -1.97
CUL3YGR003W XKS1P42826 600 aa2.77□□□□□ -1.97
CUL3YGR003W MON1P53129 644 aa2.77□□□□□ -1.97
CUL3YGR003W CMP2P14747 604 aa2.76□□□□□ -1.97
CUL3YGR003W DCG1P32460 244 aa2.76□□□□□ -1.97
CUL3YGR003W LGE1Q02796 332 aaKnown RBP2.76□□□□□ -1.97
CUL3YGR003W RSM24Q03976 319 aa2.76□□□□□ -1.97
CUL3YGR003W CDC6P09119 513 aa2.76□□□□□ -1.97
CUL3YGR003W INP54Q08227 384 aaKnown RBP2.76□□□□□ -1.97
CUL3YGR003W VPS53P47061 822 aa2.75□□□□□ -1.97
CUL3YGR003W YLR224WQ05947 369 aa2.75□□□□□ -1.97
CUL3YGR003W SPO21Q12411 609 aa2.75□□□□□ -1.97
CUL3YGR003W GLO3P38682 493 aaKnown RBP2.74□□□□□ -1.97
CUL3YGR003W NOG1Q02892 647 aaKnown RBP2.74□□□□□ -1.97
CUL3YGR003W YAP6Q03935 383 aa2.74□□□□□ -1.97
CUL3YGR003W SRM1P21827 482 aa2.74□□□□□ -1.97
CUL3YGR003W CDC55Q00362 526 aa2.74□□□□□ -1.97
CUL3YGR003W BAP2P38084 609 aa2.73□□□□□ -1.97
CUL3YGR003W MSH3P25336 1018 aa2.73□□□□□ -1.97
CUL3YGR003W RFC5P38251 354 aa2.73□□□□□ -1.97
CUL3YGR003W QDR1P40475 563 aa2.73□□□□□ -1.97
CUL3YGR003W VPS62P53285 467 aa2.73□□□□□ -1.97
CUL3YGR003W TNA1P53322 534 aa2.73□□□□□ -1.97
CUL3YGR003W HOS3Q02959 697 aaKnown RBP2.73□□□□□ -1.97
CUL3YGR003W SSA1P10591 642 aaKnown RBP2.72□□□□□ -1.97
CUL3YGR003W VMA4P22203 233 aaKnown RBP2.72□□□□□ -1.97
CUL3YGR003W CUE2P36075 443 aaKnown RBP2.72□□□□□ -1.97
CUL3YGR003W PIK1P39104 1066 aa2.72□□□□□ -1.97
CUL3YGR003W GTF1P53260 183 aaPredicted RBP2.72□□□□□ -1.97
CUL3YGR003W PEX13P80667 386 aa2.71□□□□□ -1.98
CUL3YGR003W VTS1Q08831 523 aaKnown RBP RIP-Chip data2.71□□□□□ -1.98not detected
CUL3YGR003W EMC1P25574 760 aa2.7□□□□□ -1.98
CUL3YGR003W KIP1P28742 1111 aa2.7□□□□□ -1.98
CUL3YGR003W GEF1P37020 779 aa2.7□□□□□ -1.98
CUL3YGR003W RKM2Q03942 479 aa2.7□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 35.9 ms