RNA–Protein interactions for RNA: YER118C

SHO1, Transcript of Transmembrane osmosensor for filamentous growth and HOG pathways, yeastyeast

Gene SHO1, Length 1,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHO1YER118C HSP78P33416 811 aa7.65□□□□□ -1.18
SHO1YER118C NDE1P40215 560 aa7.65□□□□□ -1.18
SHO1YER118C YML131WQ03102 365 aa7.65□□□□□ -1.18
SHO1YER118C MDM12Q92328 271 aa7.65□□□□□ -1.18
SHO1YER118C YOL087CQ99247 1116 aa7.65□□□□□ -1.18
SHO1YER118C CDC31P06704 161 aaKnown RBP7.64□□□□□ -1.19
SHO1YER118C PRP9P19736 530 aaKnown RBP7.64□□□□□ -1.19
SHO1YER118C MKK2P32491 506 aa7.64□□□□□ -1.19
SHO1YER118C MUM2P38236 366 aa7.64□□□□□ -1.19
SHO1YER118C RIM4P38741 713 aa7.64□□□□□ -1.19
SHO1YER118C SEC26P41810 973 aaKnown RBP7.64□□□□□ -1.19
SHO1YER118C UBA2P52488 636 aa7.64□□□□□ -1.19
SHO1YER118C ELP4Q02884 456 aaKnown RBP7.64□□□□□ -1.19
SHO1YER118C LYP1P32487 611 aa7.63□□□□□ -1.19
SHO1YER118C TBS1P38114 1094 aa7.63□□□□□ -1.19
SHO1YER118C DSS1P39112 969 aa7.63□□□□□ -1.19
SHO1YER118C FIR1P40020 876 aa7.63□□□□□ -1.19
SHO1YER118C MGS1P40151 587 aa7.63□□□□□ -1.19
SHO1YER118C RRD1P40454 393 aaKnown RBP7.63□□□□□ -1.19
SHO1YER118C MON1P53129 644 aa7.63□□□□□ -1.19
SHO1YER118C PEX29Q03370 554 aa7.63□□□□□ -1.19
SHO1YER118C SXM1Q04175 944 aaKnown RBP7.63□□□□□ -1.19
SHO1YER118C YPQ2Q06328 317 aa7.63□□□□□ -1.19
SHO1YER118C TSR2Q06672 205 aaKnown RBP7.63□□□□□ -1.19
SHO1YER118C REH1Q06709 432 aa7.63□□□□□ -1.19
SHO1YER118C CMR1Q12510 522 aaKnown RBP7.63□□□□□ -1.19
SHO1YER118C PRP5P21372 849 aaPredicted RBP7.62□□□□□ -1.19
SHO1YER118C MSN1P22148 382 aa7.62□□□□□ -1.19
SHO1YER118C NIC96P34077 839 aa7.62□□□□□ -1.19
SHO1YER118C RRP8P38961 392 aaKnown RBP7.62□□□□□ -1.19
SHO1YER118C MTR4P47047 1073 aaKnown RBP7.62□□□□□ -1.19
SHO1YER118C NPL3Q01560 414 aaKnown RBP RIP-Chip data7.62□□□□□ -1.19not detected
SHO1YER118C ISU1Q03020 165 aa7.62□□□□□ -1.19
SHO1YER118C JIP4Q03361 876 aa7.62□□□□□ -1.19
SHO1YER118C YLR225CQ05948 407 aaKnown RBP7.62□□□□□ -1.19
SHO1YER118C MLC2Q06580 163 aa7.62□□□□□ -1.19
SHO1YER118C LDB19Q12502 818 aa7.62□□□□□ -1.19
SHO1YER118C DAT1P13483 248 aaKnown RBP7.61□□□□□ -1.19
SHO1YER118C DYS1P38791 387 aa7.61□□□□□ -1.19
SHO1YER118C PBP1P53297 722 aaKnown RBP7.61□□□□□ -1.19
SHO1YER118C PAP2P53632 584 aaKnown RBP7.61□□□□□ -1.19
SHO1YER118C BUL2Q03758 920 aaKnown RBP7.61□□□□□ -1.19
SHO1YER118C PML39Q03760 334 aa7.61□□□□□ -1.19
SHO1YER118C MTQ2Q03920 221 aaPredicted RBP7.61□□□□□ -1.19
SHO1YER118C VIP1Q06685 1146 aaKnown RBP7.61□□□□□ -1.19
SHO1YER118C GRC3Q07845 632 aa7.61□□□□□ -1.19
SHO1YER118C VPS5Q92331 675 aa7.61□□□□□ -1.19
SHO1YER118C APA1P16550 321 aaKnown RBP7.6□□□□□ -1.19
SHO1YER118C RER2P35196 286 aa7.6□□□□□ -1.19
SHO1YER118C FKH1P40466 484 aa7.6□□□□□ -1.19
SHO1YER118C MNT3P40549 630 aa7.6□□□□□ -1.19
SHO1YER118C SAP185P40856 1058 aa7.6□□□□□ -1.19
SHO1YER118C RSC8P43609 557 aaKnown RBP7.6□□□□□ -1.19
SHO1YER118C NUT1P53114 1132 aa7.6□□□□□ -1.19
SHO1YER118C SPC19Q03954 165 aa7.6□□□□□ -1.19
SHO1YER118C LCB5Q06147 687 aaKnown RBP7.6□□□□□ -1.19
SHO1YER118C GSY1P23337 708 aa7.59□□□□□ -1.19
SHO1YER118C SQT1P35184 431 aa7.59□□□□□ -1.19
SHO1YER118C YKL133CP36066 463 aa7.59□□□□□ -1.19
SHO1YER118C RRN3P36070 627 aa7.59□□□□□ -1.19
SHO1YER118C NMD3P38861 518 aaKnown RBP7.59□□□□□ -1.19
SHO1YER118C HXT13P39924 564 aa7.59□□□□□ -1.19
SHO1YER118C HXT17P53631 564 aa7.59□□□□□ -1.19
SHO1YER118C YNL035CP53962 389 aaKnown RBP7.59□□□□□ -1.19
SHO1YER118C HXT15P54854 567 aa7.59□□□□□ -1.19
SHO1YER118C CTR9P89105 1077 aa7.59□□□□□ -1.19
SHO1YER118C MSH6Q03834 1242 aa7.59□□□□□ -1.19
SHO1YER118C HDA2Q06629 674 aa7.59□□□□□ -1.19
SHO1YER118C SSP2Q08646 371 aa7.59□□□□□ -1.19
SHO1YER118C COBP00163 385 aa7.58□□□□□ -1.2
SHO1YER118C SEC23P15303 768 aaKnown RBP7.58□□□□□ -1.2
SHO1YER118C DBF20P32328 564 aa7.58□□□□□ -1.2
SHO1YER118C AMN1P38285 549 aaPredicted RBP7.58□□□□□ -1.2
SHO1YER118C RVS167P39743 482 aaKnown RBP7.58□□□□□ -1.2
SHO1YER118C ESL1P40456 1118 aa7.58□□□□□ -1.2
SHO1YER118C RSM26P47141 266 aa7.58□□□□□ -1.2
SHO1YER118C UTP4Q06679 776 aaKnown RBP7.58□□□□□ -1.2
SHO1YER118C HBN1Q96VH4 193 aa7.58□□□□□ -1.2
SHO1YER118C TOM70P07213 617 aaKnown RBP7.57□□□□□ -1.2
SHO1YER118C KCC4P25389 1037 aa7.57□□□□□ -1.2
SHO1YER118C VBA3P25594 458 aa7.57□□□□□ -1.2
SHO1YER118C MCM10P32354 571 aa7.57□□□□□ -1.2
SHO1YER118C APM2P38700 605 aa7.57□□□□□ -1.2
SHO1YER118C YHL041WP38730 149 aa7.57□□□□□ -1.2
SHO1YER118C CCC2P38995 1004 aa7.57□□□□□ -1.2
SHO1YER118C RRN7P40992 514 aa7.57□□□□□ -1.2
SHO1YER118C DUG1P43616 481 aaKnown RBP7.57□□□□□ -1.2
SHO1YER118C SNP1Q00916 300 aaPredicted RBP7.57□□□□□ -1.2
SHO1YER118C BUD20Q08004 166 aaPredicted RBP7.57□□□□□ -1.2
SHO1YER118C NEW1Q08972 1196 aaKnown RBP7.57□□□□□ -1.2
SHO1YER118C MED1Q12321 566 aa7.57□□□□□ -1.2
SHO1YER118C AEP2P22136 580 aa7.56□□□□□ -1.2
SHO1YER118C CHS3P29465 1165 aa7.56□□□□□ -1.2
SHO1YER118C IMP2'P32351 346 aa7.56□□□□□ -1.2
SHO1YER118C FBP26P32604 452 aa7.56□□□□□ -1.2
SHO1YER118C RTG1P32607 177 aa7.56□□□□□ -1.2
SHO1YER118C KTR4P38131 464 aa7.56□□□□□ -1.2
SHO1YER118C PEX28P38848 579 aa7.56□□□□□ -1.2
SHO1YER118C QDR2P40474 542 aa7.56□□□□□ -1.2
SHO1YER118C SUM1P46676 1062 aa7.56□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 69.9 ms