RNA–Protein interactions for RNA: YDR504C

SPG3, Transcript of Protein required for high temperature survival during stationary phase, yeast

Gene SPG3, Length 384 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPG3	YDR504C	MON1	P53129	644 aa		4.18	□□□□□ -1.74
SPG3	YDR504C	BSC2	Q05611	235 aa		4.18	□□□□□ -1.74
SPG3	YDR504C	RSA3	Q05942	220 aa	Known RBP	4.18	□□□□□ -1.74
SPG3	YDR504C	SGD1	Q06132	899 aa		4.18	□□□□□ -1.74
SPG3	YDR504C	YOR352W	Q08816	343 aa		4.18	□□□□□ -1.74
SPG3	YDR504C	QDR1	P40475	563 aa		4.17	□□□□□ -1.74
SPG3	YDR504C	SPS1	P08458	490 aa		4.16	□□□□□ -1.74
SPG3	YDR504C	SRO9	P25567	434 aa	Known RBP	4.16	□□□□□ -1.74
SPG3	YDR504C	YJL045W	P47052	634 aa		4.16	□□□□□ -1.74
SPG3	YDR504C	YNL011C	P53980	444 aa		4.16	□□□□□ -1.74
SPG3	YDR504C	ROT1	Q03691	256 aa		4.16	□□□□□ -1.74
SPG3	YDR504C	RSC58	Q07979	502 aa		4.16	□□□□□ -1.74
SPG3	YDR504C	HRK1	Q08732	759 aa	Known RBP	4.16	□□□□□ -1.74
SPG3	YDR504C	MNL2	Q12205	849 aa		4.15	□□□□□ -1.75
SPG3	YDR504C	CYC1	P00044	109 aa	Predicted RBP	4.14	□□□□□ -1.75
SPG3	YDR504C	UTP5	Q04177	643 aa	Known RBP	4.14	□□□□□ -1.75
SPG3	YDR504C	INP54	Q08227	384 aa	Known RBP	4.14	□□□□□ -1.75
SPG3	YDR504C	HCM1	P25364	564 aa		4.13	□□□□□ -1.75
SPG3	YDR504C	RVS167	P39743	482 aa	Known RBP	4.13	□□□□□ -1.75
SPG3	YDR504C	MTR4	P47047	1073 aa	Known RBP	4.13	□□□□□ -1.75
SPG3	YDR504C	YNR063W	P53749	607 aa		4.13	□□□□□ -1.75
SPG3	YDR504C	PLB2	Q03674	706 aa		4.13	□□□□□ -1.75
SPG3	YDR504C	DUS4	Q06063	367 aa		4.13	□□□□□ -1.75
SPG3	YDR504C	RCL1	Q08096	367 aa	Predicted RBP	4.13	□□□□□ -1.75
SPG3	YDR504C	HSE1	P38753	452 aa		4.12	□□□□□ -1.75
SPG3	YDR504C	XKS1	P42826	600 aa		4.12	□□□□□ -1.75
SPG3	YDR504C	CDC55	Q00362	526 aa		4.12	□□□□□ -1.75
SPG3	YDR504C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
SPG3	YDR504C	YSC84	P32793	468 aa		4.11	□□□□□ -1.75
SPG3	YDR504C	ENV11	P53246	860 aa		4.11	□□□□□ -1.75
SPG3	YDR504C	DMA2	P53924	522 aa		4.11	□□□□□ -1.75
SPG3	YDR504C	TRS120	Q04183	1289 aa		4.11	□□□□□ -1.75
SPG3	YDR504C	TMA10	Q06177	86 aa		4.11	□□□□□ -1.75
SPG3	YDR504C	LST4	P34239	828 aa		4.1	□□□□□ -1.75
SPG3	YDR504C	SHU2	P38957	223 aa		4.1	□□□□□ -1.75
SPG3	YDR504C	AIM21	P40563	679 aa		4.1	□□□□□ -1.75
SPG3	YDR504C	MCM6	P53091	1017 aa	Known RBP	4.1	□□□□□ -1.75
SPG3	YDR504C	KAR5	Q04746	504 aa		4.1	□□□□□ -1.75
SPG3	YDR504C	NBA1	Q08229	501 aa	Known RBP	4.1	□□□□□ -1.75
SPG3	YDR504C	LAP2	Q10740	671 aa		4.1	□□□□□ -1.75
SPG3	YDR504C	NTO1	Q12311	748 aa		4.1	□□□□□ -1.75
SPG3	YDR504C	DOM34	P33309	386 aa		4.09	□□□□□ -1.75
SPG3	YDR504C	QNS1	P38795	714 aa	Known RBP	4.09	□□□□□ -1.75
SPG3	YDR504C	CHS7	P38843	316 aa		4.09	□□□□□ -1.75
SPG3	YDR504C	PHO23	P50947	330 aa		4.09	□□□□□ -1.75
SPG3	YDR504C	BDF2	Q07442	638 aa		4.09	□□□□□ -1.75
SPG3	YDR504C	CDC20	P26309	610 aa		4.08	□□□□□ -1.76
SPG3	YDR504C	NOG1	Q02892	647 aa	Known RBP	4.08	□□□□□ -1.76
SPG3	YDR504C	SPO21	Q12411	609 aa		4.08	□□□□□ -1.76
SPG3	YDR504C	MSH3	P25336	1018 aa		4.07	□□□□□ -1.76
SPG3	YDR504C	PMI40	P29952	429 aa	Known RBP	4.07	□□□□□ -1.76
SPG3	YDR504C	SEC26	P41810	973 aa	Known RBP	4.07	□□□□□ -1.76
SPG3	YDR504C	HNT2	P49775	206 aa		4.07	□□□□□ -1.76
SPG3	YDR504C	MNN10	P50108	393 aa	Known RBP	4.07	□□□□□ -1.76
SPG3	YDR504C	ATG1	P53104	897 aa		4.06	□□□□□ -1.76
SPG3	YDR504C	PEX13	P80667	386 aa		4.06	□□□□□ -1.76
SPG3	YDR504C	ACK1	Q07622	623 aa	Predicted RBP	4.06	□□□□□ -1.76
SPG3	YDR504C	GAL10	P04397	699 aa		4.05	□□□□□ -1.76
SPG3	YDR504C	SRM1	P21827	482 aa		4.05	□□□□□ -1.76
SPG3	YDR504C	ATG14	P38270	344 aa		4.05	□□□□□ -1.76
SPG3	YDR504C	COQ4	O13525	335 aa		4.04	□□□□□ -1.76
SPG3	YDR504C	CDC6	P09119	513 aa		4.04	□□□□□ -1.76
SPG3	YDR504C	STE11	P23561	717 aa		4.04	□□□□□ -1.76
SPG3	YDR504C	ACF4	P47129	309 aa		4.04	□□□□□ -1.76
SPG3	YDR504C	KIN4	Q01919	800 aa		4.04	□□□□□ -1.76
SPG3	YDR504C	GPB2	P39717	880 aa		4.03	□□□□□ -1.76
SPG3	YDR504C	RXT3	Q07458	294 aa		4.03	□□□□□ -1.76
SPG3	YDR504C	NOC3	Q07896	663 aa	Predicted RBP	4.03	□□□□□ -1.76
SPG3	YDR504C	GPB1	Q08886	897 aa		4.03	□□□□□ -1.76
SPG3	YDR504C	CMP2	P14747	604 aa		4.02	□□□□□ -1.77
SPG3	YDR504C	VMA4	P22203	233 aa	Known RBP	4.02	□□□□□ -1.77
SPG3	YDR504C	CCZ1	P38273	704 aa		4.02	□□□□□ -1.77
SPG3	YDR504C	GPI13	Q07830	1017 aa		4.02	□□□□□ -1.77
SPG3	YDR504C	PPM2	Q08282	695 aa		4.02	□□□□□ -1.77
SPG3	YDR504C	RSB1	Q08417	382 aa		4.02	□□□□□ -1.77
SPG3	YDR504C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.01	□□□□□ -1.77	RIP-Chip
SPG3	YDR504C	KIP1	P28742	1111 aa		4.01	□□□□□ -1.77
SPG3	YDR504C	UGA4	P32837	571 aa		4.01	□□□□□ -1.77
SPG3	YDR504C	BAP2	P38084	609 aa		4.01	□□□□□ -1.77
SPG3	YDR504C	VPS53	P47061	822 aa		4.01	□□□□□ -1.77
SPG3	YDR504C	YCS4	Q06156	1176 aa		4.01	□□□□□ -1.77
SPG3	YDR504C	URN1	Q06525	465 aa	Known RBP	4.01	□□□□□ -1.77
SPG3	YDR504C	PMA1	P05030	918 aa	Known RBP	4	□□□□□ -1.77
SPG3	YDR504C	MSS4	P38994	779 aa		4	□□□□□ -1.77
SPG3	YDR504C	YAP6	Q03935	383 aa		4	□□□□□ -1.77
SPG3	YDR504C	ATF1	P40353	525 aa		3.99	□□□□□ -1.77
SPG3	YDR504C	TNA1	P53322	534 aa		3.99	□□□□□ -1.77
SPG3	YDR504C	HOS3	Q02959	697 aa	Known RBP	3.99	□□□□□ -1.77
SPG3	YDR504C	RKM2	Q03942	479 aa		3.99	□□□□□ -1.77
SPG3	YDR504C	RSM24	Q03976	319 aa		3.99	□□□□□ -1.77
SPG3	YDR504C	YLR224W	Q05947	369 aa		3.99	□□□□□ -1.77
SPG3	YDR504C	SNF5	P18480	905 aa		3.98	□□□□□ -1.77
SPG3	YDR504C	AFG2	P32794	780 aa		3.98	□□□□□ -1.77
SPG3	YDR504C	DEF1	P35732	738 aa	Known RBP	3.98	□□□□□ -1.77
SPG3	YDR504C	ADD66	P36040	267 aa		3.98	□□□□□ -1.77
SPG3	YDR504C	PIK1	P39104	1066 aa		3.98	□□□□□ -1.77
SPG3	YDR504C	RSM26	P47141	266 aa		3.98	□□□□□ -1.77
SPG3	YDR504C	LGE1	Q02796	332 aa	Known RBP	3.98	□□□□□ -1.77
SPG3	YDR504C	RIB2	Q12362	591 aa	Known RBP	3.98	□□□□□ -1.77
SPG3	YDR504C	HEM13	P11353	328 aa	Known RBP	3.97	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 41.6 ms