RNA–Protein interactions for RNA: YDR484W

VPS52, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS52, Length 1,926 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS52YDR484W TOS4Q06266 489 aa3.61□□□□□ -1.83
VPS52YDR484W RAD2P07276 1031 aa3.6□□□□□ -1.83
VPS52YDR484W CYC8P14922 966 aa3.6□□□□□ -1.83
VPS52YDR484W ARL1P38116 183 aaKnown RBP3.6□□□□□ -1.83
VPS52YDR484W OYE3P41816 400 aaPredicted RBP3.6□□□□□ -1.83
VPS52YDR484W MEC3Q02574 474 aa3.6□□□□□ -1.83
VPS52YDR484W ESF1Q06344 628 aaKnown RBP3.6□□□□□ -1.83
VPS52YDR484W PRE9P23638 258 aaKnown RBP3.6□□□□□ -1.83
VPS52YDR484W MCM2P29469 868 aa3.6□□□□□ -1.83
VPS52YDR484W UGA4P32837 571 aa3.6□□□□□ -1.83
VPS52YDR484W YPT53P36019 220 aa3.6□□□□□ -1.83
VPS52YDR484W FYV10P40492 516 aa3.6□□□□□ -1.83
VPS52YDR484W ORC3P54790 616 aa3.6□□□□□ -1.83
VPS52YDR484W PEX13P80667 386 aa3.6□□□□□ -1.83
VPS52YDR484W SSY1Q03770 852 aa3.6□□□□□ -1.83
VPS52YDR484W NAP1P25293 417 aaKnown RBP3.59□□□□□ -1.83
VPS52YDR484W MSH3P25336 1018 aa3.59□□□□□ -1.83
VPS52YDR484W NFS1P25374 497 aa3.59□□□□□ -1.83
VPS52YDR484W PEP7P32609 515 aa3.59□□□□□ -1.83
VPS52YDR484W EXO5P38289 585 aa3.59□□□□□ -1.83
VPS52YDR484W SPR28Q04921 423 aa3.59□□□□□ -1.83
VPS52YDR484W SVF1Q05515 481 aa3.59□□□□□ -1.83
VPS52YDR484W VMA4P22203 233 aaKnown RBP3.58□□□□□ -1.84
VPS52YDR484W ABZ1P37254 787 aaPredicted RBP3.58□□□□□ -1.84
VPS52YDR484W REI1P38344 393 aaPredicted RBP3.58□□□□□ -1.84
VPS52YDR484W PEX28P38848 579 aa3.58□□□□□ -1.84
VPS52YDR484W MTR4P47047 1073 aaKnown RBP3.58□□□□□ -1.84
VPS52YDR484W RIM8P53179 542 aa3.58□□□□□ -1.84
VPS52YDR484W DOT1Q04089 582 aaKnown RBP3.58□□□□□ -1.84
VPS52YDR484W TAF13P11747 167 aa3.58□□□□□ -1.84
VPS52YDR484W ATG14P38270 344 aa3.58□□□□□ -1.84
VPS52YDR484W RPS4AP0CX35 261 aaKnown RBP3.57□□□□□ -1.84
VPS52YDR484W RPS4BP0CX36 261 aaKnown RBP3.57□□□□□ -1.84
VPS52YDR484W TRE1Q08919 783 aa3.57□□□□□ -1.84
VPS52YDR484W TY1A-LR4P0C2I8 440 aaKnown RBP3.56□□□□□ -1.84
VPS52YDR484W TY1A-DR6P0CX70 440 aa3.56□□□□□ -1.84
VPS52YDR484W TY1A-ER1P0CX71 440 aa3.56□□□□□ -1.84
VPS52YDR484W TY1A-LR2P0CX72 440 aa3.56□□□□□ -1.84
VPS52YDR484W TY1A-PLP0CX73 440 aa3.56□□□□□ -1.84
VPS52YDR484W TY1A-JR1P0CX74 440 aa3.56□□□□□ -1.84
VPS52YDR484W TY1A-LR3P0CX75 440 aa3.56□□□□□ -1.84
VPS52YDR484W TY1A-ML2P0CX76 440 aa3.56□□□□□ -1.84
VPS52YDR484W SEC23P15303 768 aaKnown RBP3.56□□□□□ -1.84
VPS52YDR484W PIC2P40035 300 aa3.56□□□□□ -1.84
VPS52YDR484W YGL140CP53120 1219 aa3.56□□□□□ -1.84
VPS52YDR484W MRPL22P53881 309 aa3.56□□□□□ -1.84
VPS52YDR484W AVO1Q08236 1176 aa3.56□□□□□ -1.84
VPS52YDR484W TY1A-GR1Q12085 440 aa3.56□□□□□ -1.84
VPS52YDR484W TY1A-PR3Q6Q5H1 440 aaKnown RBP3.56□□□□□ -1.84
VPS52YDR484W TY1A-OLQ92392 440 aaKnown RBP3.56□□□□□ -1.84
VPS52YDR484W SLS1P42900 643 aa3.56□□□□□ -1.84
VPS52YDR484W NOP7P53261 605 aaKnown RBP3.56□□□□□ -1.84
VPS52YDR484W PNS1Q12412 539 aa3.56□□□□□ -1.84
VPS52YDR484W SCP160P06105 1222 aaKnown RBP RIP-Chip data3.55□□□□□ -1.84not detected
VPS52YDR484W RDH54P38086 958 aa3.55□□□□□ -1.84
VPS52YDR484W NEM1P38757 446 aa3.55□□□□□ -1.84
VPS52YDR484W UTP5Q04177 643 aaKnown RBP3.55□□□□□ -1.84
VPS52YDR484W LAP2Q10740 671 aa3.55□□□□□ -1.84
VPS52YDR484W ALG6Q12001 544 aaKnown RBP3.55□□□□□ -1.84
VPS52YDR484W PRO1P32264 428 aa3.54□□□□□ -1.84
VPS52YDR484W PET112P33893 541 aa3.54□□□□□ -1.84
VPS52YDR484W TOD6P34219 525 aa3.54□□□□□ -1.84
VPS52YDR484W MNR2P35724 969 aa3.54□□□□□ -1.84
VPS52YDR484W HSE1P38753 452 aa3.54□□□□□ -1.84
VPS52YDR484W XKS1P42826 600 aa3.54□□□□□ -1.84
VPS52YDR484W LPX1Q12405 387 aaKnown RBP3.54□□□□□ -1.84
VPS52YDR484W TUB2P02557 457 aaKnown RBP3.54□□□□□ -1.84
VPS52YDR484W CLN2P20438 545 aa3.54□□□□□ -1.84
VPS52YDR484W ADD66P36040 267 aa3.54□□□□□ -1.84
VPS52YDR484W YAR028WP39548 234 aa3.54□□□□□ -1.84
VPS52YDR484W ENT3P47160 408 aa3.54□□□□□ -1.84
VPS52YDR484W YGR045CP53229 120 aa3.54□□□□□ -1.84
VPS52YDR484W RKM2Q03942 479 aa3.54□□□□□ -1.84
VPS52YDR484W RAD27P26793 382 aa3.53□□□□□ -1.84
VPS52YDR484W NNK1P36003 928 aa3.53□□□□□ -1.84
VPS52YDR484W PAM1P37304 830 aaKnown RBP3.53□□□□□ -1.84
VPS52YDR484W EST2Q06163 884 aa3.53□□□□□ -1.84
VPS52YDR484W MRL1Q06815 381 aa3.53□□□□□ -1.84
VPS52YDR484W RTT10Q08924 1013 aa3.53□□□□□ -1.84
VPS52YDR484W PEX7P39108 375 aa3.52□□□□□ -1.85
VPS52YDR484W ELA1P53861 379 aaPredicted RBP3.52□□□□□ -1.85
VPS52YDR484W SIW14P53965 281 aa3.52□□□□□ -1.85
VPS52YDR484W JIP5Q06214 492 aaPredicted RBP3.52□□□□□ -1.85
VPS52YDR484W GCR1P07261 785 aa3.52□□□□□ -1.85
VPS52YDR484W HEM13P11353 328 aaKnown RBP3.52□□□□□ -1.85
VPS52YDR484W SMY2P32909 740 aaKnown RBP3.52□□□□□ -1.85
VPS52YDR484W SHM2P37291 469 aaKnown RBP3.52□□□□□ -1.85
VPS52YDR484W MAD1P40957 749 aa3.52□□□□□ -1.85
VPS52YDR484W YNR063WP53749 607 aa3.52□□□□□ -1.85
VPS52YDR484W TMA46Q12000 345 aaKnown RBP3.52□□□□□ -1.85
VPS52YDR484W SOD2P00447 233 aa3.51□□□□□ -1.85
VPS52YDR484W MET10P39692 1035 aa3.51□□□□□ -1.85
VPS52YDR484W MSH4P40965 878 aaPredicted RBP3.51□□□□□ -1.85
VPS52YDR484W VPS53P47061 822 aa3.51□□□□□ -1.85
VPS52YDR484W EAR1Q03212 550 aa3.51□□□□□ -1.85
VPS52YDR484W YPL277CQ08989 487 aa3.51□□□□□ -1.85
VPS52YDR484W DED1P06634 604 aaKnown RBP3.5□□□□□ -1.85
VPS52YDR484W CDC34P14682 295 aa3.5□□□□□ -1.85
VPS52YDR484W PTC7P38797 343 aa3.5□□□□□ -1.85
VPS52YDR484W ALT1P52893 592 aa3.5□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 43.7 ms