RNA–Protein interactions for RNA: YDR139C

RUB1, Transcript of Ubiquitin-like protein with similarity to mammalian NEDD8, yeastyeast

Gene RUB1, Length 234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUB1YDR139C HDA2Q06629 674 aa5.52□□□□□ -1.53
RUB1YDR139C RTT10Q08924 1013 aa5.52□□□□□ -1.53
RUB1YDR139C GCR1P07261 785 aa5.51□□□□□ -1.53
RUB1YDR139C CLN2P20438 545 aa5.51□□□□□ -1.53
RUB1YDR139C GPT2P36148 743 aa5.51□□□□□ -1.53
RUB1YDR139C HSE1P38753 452 aa5.51□□□□□ -1.53
RUB1YDR139C ENT3P47160 408 aa5.51□□□□□ -1.53
RUB1YDR139C SIW14P53965 281 aa5.51□□□□□ -1.53
RUB1YDR139C GIC2Q06648 383 aa5.51□□□□□ -1.53
RUB1YDR139C LAP2Q10740 671 aa5.51□□□□□ -1.53
RUB1YDR139C RAD27P26793 382 aa5.5□□□□□ -1.53
RUB1YDR139C PGM1P33401 570 aaKnown RBP5.5□□□□□ -1.53
RUB1YDR139C SAF1P38352 637 aa5.5□□□□□ -1.53
RUB1YDR139C MET10P39692 1035 aa5.5□□□□□ -1.53
RUB1YDR139C IRC24P40580 263 aa5.5□□□□□ -1.53
RUB1YDR139C MAD1P40957 749 aa5.5□□□□□ -1.53
RUB1YDR139C TMA46Q12000 345 aaKnown RBP5.5□□□□□ -1.53
RUB1YDR139C DED1P06634 604 aaKnown RBP5.49□□□□□ -1.53
RUB1YDR139C CDC34P14682 295 aa5.49□□□□□ -1.53
RUB1YDR139C NAM7P30771 971 aaKnown RBP5.49□□□□□ -1.53
RUB1YDR139C SMY2P32909 740 aaKnown RBP5.49□□□□□ -1.53
RUB1YDR139C NNK1P36003 928 aa5.49□□□□□ -1.53
RUB1YDR139C YKR073CP36153 106 aa5.49□□□□□ -1.53
RUB1YDR139C MSH4P40965 878 aaPredicted RBP5.49□□□□□ -1.53
RUB1YDR139C GNP1P48813 663 aa5.49□□□□□ -1.53
RUB1YDR139C YNR063WP53749 607 aa5.49□□□□□ -1.53
RUB1YDR139C PUF3Q07807 879 aaKnown RBP RIP-Chip data5.49□□□□□ -1.53not detected
RUB1YDR139C ROD1Q02805 837 aa5.48□□□□□ -1.53
RUB1YDR139C PIN2Q12057 282 aa5.48□□□□□ -1.53
RUB1YDR139C NFS1P25374 497 aa5.47□□□□□ -1.53
RUB1YDR139C VPS16Q03308 798 aa5.47□□□□□ -1.53
RUB1YDR139C RPS4AP0CX35 261 aaKnown RBP5.46□□□□□ -1.54
RUB1YDR139C RPS4BP0CX36 261 aaKnown RBP5.46□□□□□ -1.54
RUB1YDR139C CHS2P14180 963 aa5.46□□□□□ -1.54
RUB1YDR139C DUT1P33317 147 aa5.46□□□□□ -1.54
RUB1YDR139C KAE1P36132 386 aa5.46□□□□□ -1.54
RUB1YDR139C HXT13P39924 564 aa5.46□□□□□ -1.54
RUB1YDR139C MMM1P41800 426 aa5.46□□□□□ -1.54
RUB1YDR139C VPS53P47061 822 aa5.46□□□□□ -1.54
RUB1YDR139C ALT1P52893 592 aa5.46□□□□□ -1.54
RUB1YDR139C HXT17P53631 564 aa5.46□□□□□ -1.54
RUB1YDR139C HXT15P54854 567 aa5.46□□□□□ -1.54
RUB1YDR139C RSA3Q05942 220 aaKnown RBP5.46□□□□□ -1.54
RUB1YDR139C YLR257WQ06146 321 aaKnown RBP5.46□□□□□ -1.54
RUB1YDR139C YLR122CQ12312 125 aa5.46□□□□□ -1.54
RUB1YDR139C RET1P22276 1149 aaKnown RBP5.45□□□□□ -1.54
RUB1YDR139C MKK2P32491 506 aa5.45□□□□□ -1.54
RUB1YDR139C AFG2P32794 780 aa5.45□□□□□ -1.54
RUB1YDR139C CWC24P53769 259 aa5.45□□□□□ -1.54
RUB1YDR139C PTC5Q12511 572 aa5.45□□□□□ -1.54
RUB1YDR139C MSB1P21339 1137 aaKnown RBP5.44□□□□□ -1.54
RUB1YDR139C SYP1P25623 870 aaKnown RBP5.44□□□□□ -1.54
RUB1YDR139C QNS1P38795 714 aaKnown RBP5.44□□□□□ -1.54
RUB1YDR139C CIT3P43635 486 aa5.44□□□□□ -1.54
RUB1YDR139C YOR059CQ08448 450 aaKnown RBP5.44□□□□□ -1.54
RUB1YDR139C HRK1Q08732 759 aaKnown RBP5.44□□□□□ -1.54
RUB1YDR139C WHI3P34761 661 aaKnown RBP5.43□□□□□ -1.54
RUB1YDR139C RER2P35196 286 aa5.43□□□□□ -1.54
RUB1YDR139C ALG3P38179 458 aa5.43□□□□□ -1.54
RUB1YDR139C CNN1P43618 361 aa5.43□□□□□ -1.54
RUB1YDR139C CTH1P47976 325 aa5.43□□□□□ -1.54
RUB1YDR139C RAT1Q02792 1006 aaKnown RBP5.43□□□□□ -1.54
RUB1YDR139C GDE1Q02979 1223 aa5.43□□□□□ -1.54
RUB1YDR139C DBP5P20449 482 aaKnown RBP5.42□□□□□ -1.54
RUB1YDR139C LYP1P32487 611 aa5.42□□□□□ -1.54
RUB1YDR139C VAC8P39968 578 aa5.42□□□□□ -1.54
RUB1YDR139C FAA4P47912 694 aaKnown RBP5.42□□□□□ -1.54
RUB1YDR139C YGR053CP53234 283 aa5.42□□□□□ -1.54
RUB1YDR139C EEB1Q02891 456 aa5.42□□□□□ -1.54
RUB1YDR139C TPP1Q03796 238 aa5.42□□□□□ -1.54
RUB1YDR139C MAG2Q06436 670 aaKnown RBP5.42□□□□□ -1.54
RUB1YDR139C PUS7Q08647 676 aaKnown RBP5.42□□□□□ -1.54
RUB1YDR139C NSI1Q12457 570 aa5.42□□□□□ -1.54
RUB1YDR139C TRP2P00899 507 aaKnown RBP5.41□□□□□ -1.54
RUB1YDR139C RGD1P38339 666 aa5.41□□□□□ -1.54
RUB1YDR139C YGR130CP53278 816 aa5.41□□□□□ -1.54
RUB1YDR139C RCM1P53972 490 aa5.41□□□□□ -1.54
RUB1YDR139C ALD6P54115 500 aaKnown RBP5.41□□□□□ -1.54
RUB1YDR139C EAR1Q03212 550 aa5.41□□□□□ -1.54
RUB1YDR139C NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.41□□□□□ -1.54not detected
RUB1YDR139C KRI1P42846 591 aaKnown RBP5.4□□□□□ -1.54
RUB1YDR139C HNT2P49775 206 aa5.4□□□□□ -1.54
RUB1YDR139C TIF35Q04067 274 aaKnown RBP5.4□□□□□ -1.54
RUB1YDR139C YPL260WQ08977 551 aa5.4□□□□□ -1.54
RUB1YDR139C KIP1P28742 1111 aa5.39□□□□□ -1.55
RUB1YDR139C LIP5P32875 414 aa5.39□□□□□ -1.55
RUB1YDR139C MCM7P38132 845 aa5.39□□□□□ -1.55
RUB1YDR139C NMD3P38861 518 aaKnown RBP5.39□□□□□ -1.55
RUB1YDR139C YJL045WP47052 634 aa5.39□□□□□ -1.55
RUB1YDR139C TYW3P53177 273 aa5.39□□□□□ -1.55
RUB1YDR139C SPO20Q04359 397 aa5.39□□□□□ -1.55
RUB1YDR139C AOS1Q06624 347 aa5.39□□□□□ -1.55
RUB1YDR139C MED7Q08278 222 aa5.39□□□□□ -1.55
RUB1YDR139C YVC1Q12324 675 aa5.39□□□□□ -1.55
RUB1YDR139C CYC7P00045 113 aa5.38□□□□□ -1.55
RUB1YDR139C MLS1P30952 554 aa5.38□□□□□ -1.55
RUB1YDR139C FAL1Q12099 399 aaKnown RBP5.38□□□□□ -1.55
RUB1YDR139C SPO21Q12411 609 aa5.38□□□□□ -1.55
RUB1YDR139C INO1P11986 533 aa5.37□□□□□ -1.55
RUB1YDR139C MPH1P40562 993 aa5.37□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms