RNA–Protein interactions for RNA: YDR110W

FOB1, Transcript of Nucleolar protein that binds the rDNA replication fork barrier site, yeastyeast

Gene FOB1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FOB1YDR110W SGD1Q06132 899 aa6.19□□□□□ -1.42
FOB1YDR110W SMD2Q06217 110 aaKnown RBP6.19□□□□□ -1.42
FOB1YDR110W THI73Q07904 523 aa6.19□□□□□ -1.42
FOB1YDR110W PCL8Q08966 492 aa6.19□□□□□ -1.42
FOB1YDR110W NEW1Q08972 1196 aaKnown RBP6.19□□□□□ -1.42
FOB1YDR110W TOP2P06786 1428 aaKnown RBP6.18□□□□□ -1.42
FOB1YDR110W HNM1P19807 563 aa6.18□□□□□ -1.42
FOB1YDR110W PTP2P29461 750 aa6.18□□□□□ -1.42
FOB1YDR110W ISF1P32488 338 aa6.18□□□□□ -1.42
FOB1YDR110W ARC19P33204 171 aaKnown RBP6.18□□□□□ -1.42
FOB1YDR110W HSP78P33416 811 aa6.18□□□□□ -1.42
FOB1YDR110W PXA2P34230 853 aa6.18□□□□□ -1.42
FOB1YDR110W TMA108P40462 946 aa6.18□□□□□ -1.42
FOB1YDR110W YGR122WP53272 402 aa6.18□□□□□ -1.42
FOB1YDR110W YGR125WP53273 1036 aa6.18□□□□□ -1.42
FOB1YDR110W UME1Q03010 460 aa6.18□□□□□ -1.42
FOB1YDR110W SPP382Q06411 708 aaPredicted RBP6.18□□□□□ -1.42
FOB1YDR110W RSC58Q07979 502 aa6.18□□□□□ -1.42
FOB1YDR110W RRP6Q12149 733 aaKnown RBP6.18□□□□□ -1.42
FOB1YDR110W RUD3Q12234 484 aaKnown RBP6.18□□□□□ -1.42
FOB1YDR110W PHO87P25360 923 aa6.17□□□□□ -1.42
FOB1YDR110W KTR4P38131 464 aa6.17□□□□□ -1.42
FOB1YDR110W HAL5P38970 855 aaKnown RBP6.17□□□□□ -1.42
FOB1YDR110W RET2P43621 546 aa6.17□□□□□ -1.42
FOB1YDR110W YLH47Q06493 454 aa6.17□□□□□ -1.42
FOB1YDR110W MDM38Q08179 573 aa6.17□□□□□ -1.42
FOB1YDR110W TSR3Q12094 313 aaKnown RBP6.17□□□□□ -1.42
FOB1YDR110W CCP1P00431 361 aa6.16□□□□□ -1.42
FOB1YDR110W BCD1P38772 366 aa6.16□□□□□ -1.42
FOB1YDR110W RTT105P40063 208 aa6.16□□□□□ -1.42
FOB1YDR110W IRR1P40541 1150 aa6.16□□□□□ -1.42
FOB1YDR110W SAM37P50110 327 aa6.16□□□□□ -1.42
FOB1YDR110W HEH2Q03281 663 aa6.16□□□□□ -1.42
FOB1YDR110W MCD1Q12158 566 aa6.16□□□□□ -1.42
FOB1YDR110W LSO1Q3E827 93 aa6.16□□□□□ -1.42
FOB1YDR110W DNF1P32660 1571 aa6.16□□□□□ -1.42
FOB1YDR110W POL1P13382 1468 aa6.16□□□□□ -1.42
FOB1YDR110W TY2B-BQ12491 1770 aa6.16□□□□□ -1.42
FOB1YDR110W YHL041WP38730 149 aa6.16□□□□□ -1.42
FOB1YDR110W LRP1P38801 184 aaKnown RBP6.16□□□□□ -1.42
FOB1YDR110W YIL166CP40445 542 aa6.16□□□□□ -1.42
FOB1YDR110W SUM1P46676 1062 aa6.16□□□□□ -1.42
FOB1YDR110W RKR1Q04781 1562 aa6.16□□□□□ -1.42
FOB1YDR110W FAP7Q12055 197 aaPredicted RBP6.16□□□□□ -1.42
FOB1YDR110W TY1B-DR3Q99231 1755 aa6.15□□□□□ -1.42
FOB1YDR110W SCP160P06105 1222 aaKnown RBP RIP-Chip data6.15□□□□□ -1.42 RIP-Chip
FOB1YDR110W MRPL25P23369 157 aa6.15□□□□□ -1.42
FOB1YDR110W EAP1P36041 632 aaKnown RBP6.15□□□□□ -1.42
FOB1YDR110W FUN12P39730 1002 aaKnown RBP6.15□□□□□ -1.42
FOB1YDR110W YGR053CP53234 283 aa6.15□□□□□ -1.42
FOB1YDR110W MEP3P53390 489 aa6.15□□□□□ -1.42
FOB1YDR110W RAT1Q02792 1006 aaKnown RBP6.15□□□□□ -1.42
FOB1YDR110W OSH2Q12451 1283 aa6.15□□□□□ -1.42
FOB1YDR110W PAN1P32521 1480 aa6.15□□□□□ -1.43
FOB1YDR110W ESC1Q03661 1658 aaKnown RBP6.14□□□□□ -1.43
FOB1YDR110W TY1B-HO13535 1793 aa6.14□□□□□ -1.43
FOB1YDR110W TY1B-DR5P0C2I2 1755 aa6.14□□□□□ -1.43
FOB1YDR110W TY1B-DR6P0C2I3 1755 aa6.14□□□□□ -1.43
FOB1YDR110W TY1B-LR2P0C2I5 1755 aa6.14□□□□□ -1.43
FOB1YDR110W TY1B-LR3P0C2I6 1755 aaKnown RBP6.14□□□□□ -1.43
FOB1YDR110W TY1B-PR1P0C2I9 1755 aaKnown RBP6.14□□□□□ -1.43
FOB1YDR110W TY1B-PR2P0C2J0 1756 aa6.14□□□□□ -1.43
FOB1YDR110W TY1B-PR3P0C2J1 1755 aaKnown RBP6.14□□□□□ -1.43
FOB1YDR110W TY1B-JR1P47098 1755 aa6.14□□□□□ -1.43
FOB1YDR110W TY1B-ML2Q03434 1755 aaKnown RBP6.14□□□□□ -1.43
FOB1YDR110W TY1B-ER1Q03612 1755 aa6.14□□□□□ -1.43
FOB1YDR110W TY1B-ML1Q04711 1755 aaKnown RBP6.14□□□□□ -1.43
FOB1YDR110W TY1B-GR2Q12269 1755 aa6.14□□□□□ -1.43
FOB1YDR110W TY1B-OLQ12273 1755 aa6.14□□□□□ -1.43
FOB1YDR110W TY1B-PLQ12414 1755 aaKnown RBP6.14□□□□□ -1.43
FOB1YDR110W PET111P08468 800 aa6.14□□□□□ -1.43
FOB1YDR110W DAL80P26343 269 aa6.14□□□□□ -1.43
FOB1YDR110W DHR2P36009 735 aaPredicted RBP6.14□□□□□ -1.43
FOB1YDR110W BFR1P38934 470 aaKnown RBP RIP-Chip data6.14□□□□□ -1.43not detected
FOB1YDR110W ARB1P40024 610 aaKnown RBP6.14□□□□□ -1.43
FOB1YDR110W GPP2P40106 250 aaKnown RBP6.14□□□□□ -1.43
FOB1YDR110W RSC8P43609 557 aaKnown RBP6.14□□□□□ -1.43
FOB1YDR110W RTA1P53047 317 aa6.14□□□□□ -1.43
FOB1YDR110W NCS2P53923 493 aaPredicted RBP6.14□□□□□ -1.43
FOB1YDR110W REX2P54964 269 aaKnown RBP6.14□□□□□ -1.43
FOB1YDR110W CTR9P89105 1077 aa6.14□□□□□ -1.43
FOB1YDR110W VPS30Q02948 557 aa6.14□□□□□ -1.43
FOB1YDR110W YRR1Q12172 810 aa6.14□□□□□ -1.43
FOB1YDR110W CDC34P14682 295 aa6.13□□□□□ -1.43
FOB1YDR110W MER1P16523 270 aa6.13□□□□□ -1.43
FOB1YDR110W SRO9P25567 434 aaKnown RBP6.13□□□□□ -1.43
FOB1YDR110W KIP2P28743 706 aa6.13□□□□□ -1.43
FOB1YDR110W SCT1P32784 759 aa6.13□□□□□ -1.43
FOB1YDR110W RAD54P32863 898 aa6.13□□□□□ -1.43
FOB1YDR110W DUT1P33317 147 aa6.13□□□□□ -1.43
FOB1YDR110W YBR184WP38299 523 aa6.13□□□□□ -1.43
FOB1YDR110W FMP10P40098 244 aa6.13□□□□□ -1.43
FOB1YDR110W YNL193WP53870 558 aa6.13□□□□□ -1.43
FOB1YDR110W HOT1Q03213 719 aa6.13□□□□□ -1.43
FOB1YDR110W TAP42Q04372 366 aa6.13□□□□□ -1.43
FOB1YDR110W REC107P21651 314 aa6.13□□□□□ -1.43
FOB1YDR110W CLB5P30283 435 aa6.13□□□□□ -1.43
FOB1YDR110W RIB7P33312 244 aa6.13□□□□□ -1.43
FOB1YDR110W BDF1P35817 686 aa6.13□□□□□ -1.43
FOB1YDR110W OTU2P38747 307 aaKnown RBP6.13□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 201.3 ms