RNA–Protein interactions for RNA: YCR020W-B

HTL1, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene HTL1, Length 237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HTL1YCR020W-B HSE1P38753 452 aa3.55□□□□□ -1.84
HTL1YCR020W-B XKS1P42826 600 aa3.55□□□□□ -1.84
HTL1YCR020W-B FOL2P51601 243 aaKnown RBP3.55□□□□□ -1.84
HTL1YCR020W-B UTP5Q04177 643 aaKnown RBP3.55□□□□□ -1.84
HTL1YCR020W-B LAP2Q10740 671 aa3.55□□□□□ -1.84
HTL1YCR020W-B PRP6P19735 899 aaPredicted RBP3.54□□□□□ -1.84
HTL1YCR020W-B AIM26P32858 118 aa3.54□□□□□ -1.84
HTL1YCR020W-B SQT1P35184 431 aa3.54□□□□□ -1.84
HTL1YCR020W-B UBP3Q01477 912 aaKnown RBP RIP-Chip data3.54□□□□□ -1.84not detected
HTL1YCR020W-B NOG1Q02892 647 aaKnown RBP3.54□□□□□ -1.84
HTL1YCR020W-B DAL4Q04895 635 aa3.54□□□□□ -1.84
HTL1YCR020W-B PRP40P33203 583 aaKnown RBP3.53□□□□□ -1.84
HTL1YCR020W-B YHL050CP38721 697 aa3.53□□□□□ -1.84
HTL1YCR020W-B YHR219WP38900 624 aa3.53□□□□□ -1.84
HTL1YCR020W-B RSA3Q05942 220 aaKnown RBP3.53□□□□□ -1.84
HTL1YCR020W-B SAM35P14693 329 aa3.52□□□□□ -1.85
HTL1YCR020W-B MDL2P33311 773 aa3.52□□□□□ -1.85
HTL1YCR020W-B ULP1Q02724 621 aa3.52□□□□□ -1.85
HTL1YCR020W-B HDA2Q06629 674 aa3.52□□□□□ -1.85
HTL1YCR020W-B HRK1Q08732 759 aaKnown RBP3.52□□□□□ -1.85
HTL1YCR020W-B KAR2P16474 682 aaKnown RBP3.51□□□□□ -1.85
HTL1YCR020W-B VMA4P22203 233 aaKnown RBP3.51□□□□□ -1.85
HTL1YCR020W-B GCD6P32501 712 aaKnown RBP3.51□□□□□ -1.85
HTL1YCR020W-B TOD6P34219 525 aa3.51□□□□□ -1.85
HTL1YCR020W-B PEX28P38848 579 aa3.51□□□□□ -1.85
HTL1YCR020W-B THI12P42883 340 aa3.51□□□□□ -1.85
HTL1YCR020W-B THI5P43534 340 aa3.51□□□□□ -1.85
HTL1YCR020W-B YJL045WP47052 634 aa3.51□□□□□ -1.85
HTL1YCR020W-B THI11P47183 340 aa3.51□□□□□ -1.85
HTL1YCR020W-B THI13Q07748 340 aa3.51□□□□□ -1.85
HTL1YCR020W-B VPS35P34110 944 aa3.5□□□□□ -1.85
HTL1YCR020W-B QNS1P38795 714 aaKnown RBP3.5□□□□□ -1.85
HTL1YCR020W-B RIM8P53179 542 aa3.5□□□□□ -1.85
HTL1YCR020W-B SNO2P53823 222 aa3.5□□□□□ -1.85
HTL1YCR020W-B YOR352WQ08816 343 aa3.5□□□□□ -1.85
HTL1YCR020W-B OXR1Q08952 273 aa3.5□□□□□ -1.85
HTL1YCR020W-B YPL277CQ08989 487 aa3.5□□□□□ -1.85
HTL1YCR020W-B RPS13P05756 151 aaKnown RBP3.49□□□□□ -1.85
HTL1YCR020W-B SCP160P06105 1222 aaKnown RBP RIP-Chip data3.49□□□□□ -1.85not detected
HTL1YCR020W-B PHO4P07270 312 aaKnown RBP3.49□□□□□ -1.85
HTL1YCR020W-B ADD66P36040 267 aa3.49□□□□□ -1.85
HTL1YCR020W-B DAK2P43550 591 aa3.49□□□□□ -1.85
HTL1YCR020W-B DED1P06634 604 aaKnown RBP3.48□□□□□ -1.85
HTL1YCR020W-B SPS1P08458 490 aa3.48□□□□□ -1.85
HTL1YCR020W-B YSC84P32793 468 aa3.48□□□□□ -1.85
HTL1YCR020W-B TOS4Q06266 489 aa3.48□□□□□ -1.85
HTL1YCR020W-B NBA1Q08229 501 aaKnown RBP3.48□□□□□ -1.85
HTL1YCR020W-B SOD2P00447 233 aa3.47□□□□□ -1.85
HTL1YCR020W-B SRO9P25567 434 aaKnown RBP3.47□□□□□ -1.85
HTL1YCR020W-B MET4P32389 672 aa3.47□□□□□ -1.85
HTL1YCR020W-B GPB2P39717 880 aa3.47□□□□□ -1.85
HTL1YCR020W-B VPS53P47061 822 aa3.47□□□□□ -1.85
HTL1YCR020W-B YGL140CP53120 1219 aa3.47□□□□□ -1.85
HTL1YCR020W-B GIS1Q03833 894 aa3.47□□□□□ -1.85
HTL1YCR020W-B EST2Q06163 884 aa3.47□□□□□ -1.85
HTL1YCR020W-B RSC58Q07979 502 aa3.47□□□□□ -1.85
HTL1YCR020W-B KIP1P28742 1111 aa3.46□□□□□ -1.86
HTL1YCR020W-B ADI1Q03677 179 aa3.46□□□□□ -1.86
HTL1YCR020W-B RCL1Q08096 367 aaPredicted RBP3.46□□□□□ -1.86
HTL1YCR020W-B RSB1Q08417 382 aa3.46□□□□□ -1.86
HTL1YCR020W-B PTC5Q12511 572 aa3.46□□□□□ -1.86
HTL1YCR020W-B COQ4O13525 335 aa3.45□□□□□ -1.86
HTL1YCR020W-B HEM13P11353 328 aaKnown RBP3.45□□□□□ -1.86
HTL1YCR020W-B RDH54P38086 958 aa3.45□□□□□ -1.86
HTL1YCR020W-B RKM2Q03942 479 aa3.45□□□□□ -1.86
HTL1YCR020W-B YLR358CO13565 187 aa3.44□□□□□ -1.86
HTL1YCR020W-B RPT1P33299 467 aaKnown RBP3.44□□□□□ -1.86
HTL1YCR020W-B CCZ1P38273 704 aa3.44□□□□□ -1.86
HTL1YCR020W-B FAA3P39002 694 aa3.44□□□□□ -1.86
HTL1YCR020W-B SPT20P50875 604 aa3.44□□□□□ -1.86
HTL1YCR020W-B HOS3Q02959 697 aaKnown RBP3.44□□□□□ -1.86
HTL1YCR020W-B YPL109CQ02981 657 aa3.44□□□□□ -1.86
HTL1YCR020W-B MSC6Q08818 692 aaKnown RBP3.44□□□□□ -1.86
HTL1YCR020W-B WHI5Q12416 295 aa3.44□□□□□ -1.86
HTL1YCR020W-B CYC1P00044 109 aaPredicted RBP3.43□□□□□ -1.86
HTL1YCR020W-B AFG2P32794 780 aa3.43□□□□□ -1.86
HTL1YCR020W-B SHM2P37291 469 aaKnown RBP3.43□□□□□ -1.86
HTL1YCR020W-B ALG3P38179 458 aa3.43□□□□□ -1.86
HTL1YCR020W-B PPX1P38698 397 aa3.43□□□□□ -1.86
HTL1YCR020W-B SSF1P38789 453 aaPredicted RBP3.43□□□□□ -1.86
HTL1YCR020W-B STM1P39015 273 aaKnown RBP3.43□□□□□ -1.86
HTL1YCR020W-B ROT1Q03691 256 aa3.43□□□□□ -1.86
HTL1YCR020W-B SGD1Q06132 899 aa3.43□□□□□ -1.86
HTL1YCR020W-B SPO21Q12411 609 aa3.43□□□□□ -1.86
HTL1YCR020W-B CTS1P29029 562 aa3.42□□□□□ -1.86
HTL1YCR020W-B LAM1P38851 1228 aa3.42□□□□□ -1.86
HTL1YCR020W-B PIC2P40035 300 aa3.42□□□□□ -1.86
HTL1YCR020W-B TNA1P53322 534 aa3.42□□□□□ -1.86
HTL1YCR020W-B CLU1Q03690 1277 aaKnown RBP3.42□□□□□ -1.86
HTL1YCR020W-B SEC23P15303 768 aaKnown RBP3.41□□□□□ -1.86
HTL1YCR020W-B PUF4P25339 888 aaKnown RBP RIP-Chip data3.41□□□□□ -1.86not detected
HTL1YCR020W-B MPT5P39016 859 aaKnown RBP RIP-Chip data3.41□□□□□ -1.86not detected
HTL1YCR020W-B MEF2P39677 819 aa3.41□□□□□ -1.86
HTL1YCR020W-B SEC26P41810 973 aaKnown RBP3.41□□□□□ -1.86
HTL1YCR020W-B YDR132CQ03900 495 aa3.41□□□□□ -1.86
HTL1YCR020W-B TUB2P02557 457 aaKnown RBP3.4□□□□□ -1.87
HTL1YCR020W-B HXK1P04806 485 aaKnown RBP3.4□□□□□ -1.87
HTL1YCR020W-B PRE10P21242 288 aaKnown RBP RIP-Chip data3.4□□□□□ -1.87not detected
HTL1YCR020W-B PRE9P23638 258 aaKnown RBP3.4□□□□□ -1.87
HTL1YCR020W-B ABZ1P37254 787 aaPredicted RBP3.4□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms