RNA–Protein interactions for RNA: YCL005W

LDB16, Transcript of Protein of unknown function, yeastyeast

Gene LDB16, Length 771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB16YCL005W CLC1P17891 233 aa7.41□□□□□ -1.22
LDB16YCL005W ROX1P25042 368 aa7.41□□□□□ -1.22
LDB16YCL005W LCB1P25045 558 aaKnown RBP7.41□□□□□ -1.22
LDB16YCL005W SKI2P35207 1287 aaKnown RBP RIP-Chip data7.41□□□□□ -1.22not detected
LDB16YCL005W GRX7P38068 203 aa7.41□□□□□ -1.22
LDB16YCL005W RRP8P38961 392 aaKnown RBP7.41□□□□□ -1.22
LDB16YCL005W SYH1Q02875 849 aaKnown RBP7.41□□□□□ -1.22
LDB16YCL005W COG8Q04632 607 aa7.41□□□□□ -1.22
LDB16YCL005W ESF1Q06344 628 aaKnown RBP7.41□□□□□ -1.22
LDB16YCL005W PGA3Q12746 312 aaKnown RBP7.41□□□□□ -1.22
LDB16YCL005W CTT1P06115 562 aa7.4□□□□□ -1.22
LDB16YCL005W RDS2P19541 446 aaKnown RBP7.4□□□□□ -1.22
LDB16YCL005W PEP3P27801 918 aa7.4□□□□□ -1.22
LDB16YCL005W IMP2'P32351 346 aa7.4□□□□□ -1.22
LDB16YCL005W IXR1P33417 597 aa7.4□□□□□ -1.22
LDB16YCL005W PTK1P36002 662 aaPredicted RBP7.4□□□□□ -1.22
LDB16YCL005W TGL4P36165 910 aa7.4□□□□□ -1.22
LDB16YCL005W BOI1P38041 980 aaKnown RBP7.4□□□□□ -1.22
LDB16YCL005W BDH2P39713 417 aa7.4□□□□□ -1.22
LDB16YCL005W YFH7P43591 353 aa7.4□□□□□ -1.22
LDB16YCL005W JJJ2P46997 583 aa7.4□□□□□ -1.22
LDB16YCL005W RET1P22276 1149 aaKnown RBP7.39□□□□□ -1.23
LDB16YCL005W RPT3P33298 428 aaKnown RBP7.39□□□□□ -1.23
LDB16YCL005W CRG1P38892 291 aaRIP-Chip data7.39□□□□□ -1.23not detected
LDB16YCL005W SLN1P39928 1220 aaPredicted RBP7.39□□□□□ -1.23
LDB16YCL005W VID28P40547 921 aa7.39□□□□□ -1.23
LDB16YCL005W EAF6P47128 113 aa7.39□□□□□ -1.23
LDB16YCL005W YKE2P52553 114 aa7.39□□□□□ -1.23
LDB16YCL005W SPN1Q06505 410 aaPredicted RBP7.39□□□□□ -1.23
LDB16YCL005W PSK2Q08217 1101 aa7.39□□□□□ -1.23
LDB16YCL005W MDL2P33311 773 aa7.38□□□□□ -1.23
LDB16YCL005W APL6P46682 809 aa7.38□□□□□ -1.23
LDB16YCL005W CTF18P49956 741 aa7.38□□□□□ -1.23
LDB16YCL005W PEX14P53112 341 aa7.38□□□□□ -1.23
LDB16YCL005W YGL081WP53156 320 aa7.38□□□□□ -1.23
LDB16YCL005W HST1P53685 503 aa7.38□□□□□ -1.23
LDB16YCL005W HRQ1Q05549 1077 aa7.38□□□□□ -1.23
LDB16YCL005W PPM2Q08282 695 aa7.38□□□□□ -1.23
LDB16YCL005W COQ1P18900 473 aa7.37□□□□□ -1.23
LDB16YCL005W PUP1P25043 261 aa7.37□□□□□ -1.23
LDB16YCL005W FBP26P32604 452 aa7.37□□□□□ -1.23
LDB16YCL005W YKU70P32807 602 aa7.37□□□□□ -1.23
LDB16YCL005W ARL1P38116 183 aaKnown RBP7.37□□□□□ -1.23
LDB16YCL005W YHL017WP38745 532 aa7.37□□□□□ -1.23
LDB16YCL005W YER156CP40093 338 aaKnown RBP7.37□□□□□ -1.23
LDB16YCL005W PIP2P52960 996 aa7.37□□□□□ -1.23
LDB16YCL005W RPL34AP87262 121 aaPredicted RBP7.37□□□□□ -1.23
LDB16YCL005W TOS4Q06266 489 aa7.37□□□□□ -1.23
LDB16YCL005W WRS1Q12109 432 aaKnown RBP7.37□□□□□ -1.23
LDB16YCL005W MATALPHA2P0CY08 210 aa7.36□□□□□ -1.23
LDB16YCL005W HMLALPHA2P0CY09 210 aa7.36□□□□□ -1.23
LDB16YCL005W PRX1P34227 261 aaKnown RBP7.36□□□□□ -1.23
LDB16YCL005W RER2P35196 286 aa7.36□□□□□ -1.23
LDB16YCL005W SOH1P38633 127 aa7.36□□□□□ -1.23
LDB16YCL005W AIR1P40507 360 aaKnown RBP7.36□□□□□ -1.23
LDB16YCL005W HYR1P40581 163 aaKnown RBP7.36□□□□□ -1.23
LDB16YCL005W RPS15Q01855 142 aaKnown RBP7.36□□□□□ -1.23
LDB16YCL005W PRP42Q03776 544 aaKnown RBP7.36□□□□□ -1.23
LDB16YCL005W EST2Q06163 884 aa7.36□□□□□ -1.23
LDB16YCL005W PUS5Q06244 254 aa7.36□□□□□ -1.23
LDB16YCL005W NOB1Q08444 459 aaKnown RBP7.36□□□□□ -1.23
LDB16YCL005W ICL1P28240 557 aaPredicted RBP7.35□□□□□ -1.23
LDB16YCL005W RTS1P38903 757 aa7.35□□□□□ -1.23
LDB16YCL005W GSM1P42950 618 aa7.35□□□□□ -1.23
LDB16YCL005W BRE2P43132 505 aa7.35□□□□□ -1.23
LDB16YCL005W ENT3P47160 408 aa7.35□□□□□ -1.23
LDB16YCL005W UFD2P54860 961 aa7.35□□□□□ -1.23
LDB16YCL005W KIN4Q01919 800 aa7.35□□□□□ -1.23
LDB16YCL005W MRD1Q06106 887 aaKnown RBP7.35□□□□□ -1.23
LDB16YCL005W ELG1Q12050 791 aa7.35□□□□□ -1.23
LDB16YCL005W ARG82P07250 355 aa7.34□□□□□ -1.23
LDB16YCL005W SNF3P10870 884 aa7.34□□□□□ -1.23
LDB16YCL005W GAL2P13181 574 aa7.34□□□□□ -1.23
LDB16YCL005W KTR7P40504 517 aa7.34□□□□□ -1.23
LDB16YCL005W BUD6P41697 788 aa7.34□□□□□ -1.23
LDB16YCL005W CIR1P42940 261 aa7.34□□□□□ -1.23
LDB16YCL005W CLA4P48562 842 aa7.34□□□□□ -1.23
LDB16YCL005W ECM23Q02710 187 aa7.34□□□□□ -1.23
LDB16YCL005W YPL150WQ12152 901 aa7.34□□□□□ -1.23
LDB16YCL005W RRG1Q12167 365 aaPredicted RBP7.34□□□□□ -1.23
LDB16YCL005W CPA2P03965 1118 aaKnown RBP7.33□□□□□ -1.24
LDB16YCL005W CHO2P05374 869 aaKnown RBP7.33□□□□□ -1.24
LDB16YCL005W RPS9BP05755 195 aaKnown RBP7.33□□□□□ -1.24
LDB16YCL005W RSM25P40496 264 aa7.33□□□□□ -1.24
LDB16YCL005W EMW1P42842 904 aaKnown RBP7.33□□□□□ -1.24
LDB16YCL005W PEX19Q07418 342 aa7.33□□□□□ -1.24
LDB16YCL005W ATG20Q07528 640 aa7.33□□□□□ -1.24
LDB16YCL005W ACK1Q07622 623 aaPredicted RBP7.33□□□□□ -1.24
LDB16YCL005W GAS5Q08193 484 aa7.33□□□□□ -1.24
LDB16YCL005W YPL260WQ08977 551 aa7.33□□□□□ -1.24
LDB16YCL005W PFK2P16862 959 aaKnown RBP RIP-Chip data7.32□□□□□ -1.24not detected
LDB16YCL005W HED1Q03937 162 aa7.32□□□□□ -1.24
LDB16YCL005W YLR407WQ06070 228 aa7.32□□□□□ -1.24
LDB16YCL005W AIM44Q99299 758 aa7.32□□□□□ -1.24
LDB16YCL005W TOP1P04786 769 aa7.31□□□□□ -1.24
LDB16YCL005W HAP4P14064 554 aa7.31□□□□□ -1.24
LDB16YCL005W PHO87P25360 923 aa7.31□□□□□ -1.24
LDB16YCL005W RPS7AP26786 190 aaKnown RBP7.31□□□□□ -1.24
LDB16YCL005W ANP1P32629 500 aa7.31□□□□□ -1.24
LDB16YCL005W RFC5P38251 354 aa7.31□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms