RNA–Protein interactions for RNA: YBR221C

PDB1, Transcript of E1 beta subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDB1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDB1YBR221C YOL087CQ99247 1116 aa6.4□□□□□ -1.38
PDB1YBR221C ERR1P0CX10 437 aa6.39□□□□□ -1.39
PDB1YBR221C ERR2P0CX11 437 aa6.39□□□□□ -1.39
PDB1YBR221C CYC8P14922 966 aa6.39□□□□□ -1.39
PDB1YBR221C SIS1P25294 352 aaKnown RBP6.39□□□□□ -1.39
PDB1YBR221C STO1P34160 861 aaKnown RBP6.39□□□□□ -1.39
PDB1YBR221C YKL100CP34248 587 aa6.39□□□□□ -1.39
PDB1YBR221C EXO84P38261 753 aa6.39□□□□□ -1.39
PDB1YBR221C GGA2P38817 585 aaKnown RBP6.39□□□□□ -1.39
PDB1YBR221C ALA1P40825 983 aaKnown RBP6.39□□□□□ -1.39
PDB1YBR221C PIP2P52960 996 aa6.39□□□□□ -1.39
PDB1YBR221C ROM1P53046 1155 aa6.39□□□□□ -1.39
PDB1YBR221C YGR122WP53272 402 aa6.39□□□□□ -1.39
PDB1YBR221C ALO1P54783 526 aaKnown RBP6.39□□□□□ -1.39
PDB1YBR221C ATG13Q06628 738 aa6.39□□□□□ -1.39
PDB1YBR221C PSR1Q07800 427 aa6.39□□□□□ -1.39
PDB1YBR221C GPI13Q07830 1017 aa6.39□□□□□ -1.39
PDB1YBR221C SRF1Q12516 437 aa6.39□□□□□ -1.39
PDB1YBR221C LSO1Q3E827 93 aa6.39□□□□□ -1.39
PDB1YBR221C TPM1P17536 199 aaKnown RBP6.38□□□□□ -1.39
PDB1YBR221C ACE2P21192 770 aa6.38□□□□□ -1.39
PDB1YBR221C AAD3P25612 363 aa6.38□□□□□ -1.39
PDB1YBR221C ESL1P40456 1118 aa6.38□□□□□ -1.39
PDB1YBR221C ATP22P50273 684 aaPredicted RBP6.38□□□□□ -1.39
PDB1YBR221C UBA2P52488 636 aa6.38□□□□□ -1.39
PDB1YBR221C BTN2P53286 410 aa6.38□□□□□ -1.39
PDB1YBR221C TGL2P54857 326 aa6.38□□□□□ -1.39
PDB1YBR221C MPD2Q99316 277 aa6.38□□□□□ -1.39
PDB1YBR221C NUP145P49687 1317 aa6.38□□□□□ -1.39
PDB1YBR221C URB1P34241 1764 aaKnown RBP6.37□□□□□ -1.39
PDB1YBR221C PRI2P20457 528 aa6.37□□□□□ -1.39
PDB1YBR221C VPS35P34110 944 aa6.37□□□□□ -1.39
PDB1YBR221C MNT3P40549 630 aa6.37□□□□□ -1.39
PDB1YBR221C ACS2P52910 683 aaKnown RBP6.37□□□□□ -1.39
PDB1YBR221C REH1Q06709 432 aa6.37□□□□□ -1.39
PDB1YBR221C OPI10Q08202 246 aa6.37□□□□□ -1.39
PDB1YBR221C MED1Q12321 566 aa6.37□□□□□ -1.39
PDB1YBR221C TRP5P00931 707 aaKnown RBP6.36□□□□□ -1.39
PDB1YBR221C NAT1P12945 854 aaKnown RBP6.36□□□□□ -1.39
PDB1YBR221C PXA2P34230 853 aa6.36□□□□□ -1.39
PDB1YBR221C NUP120P35729 1037 aa6.36□□□□□ -1.39
PDB1YBR221C RKM3P38222 552 aa6.36□□□□□ -1.39
PDB1YBR221C RRP8P38961 392 aaKnown RBP6.36□□□□□ -1.39
PDB1YBR221C HAL5P38970 855 aaKnown RBP6.36□□□□□ -1.39
PDB1YBR221C MVP1P40959 511 aaKnown RBP6.36□□□□□ -1.39
PDB1YBR221C XKS1P42826 600 aa6.36□□□□□ -1.39
PDB1YBR221C EAF6P47128 113 aa6.36□□□□□ -1.39
PDB1YBR221C FAA4P47912 694 aaKnown RBP6.36□□□□□ -1.39
PDB1YBR221C PEX14P53112 341 aa6.36□□□□□ -1.39
PDB1YBR221C COG6P53959 839 aa6.36□□□□□ -1.39
PDB1YBR221C MET14Q02196 202 aa6.36□□□□□ -1.39
PDB1YBR221C TFB2Q02939 513 aa6.36□□□□□ -1.39
PDB1YBR221C YML131WQ03102 365 aa6.36□□□□□ -1.39
PDB1YBR221C RRP6Q12149 733 aaKnown RBP6.36□□□□□ -1.39
PDB1YBR221C SAC3P46674 1301 aa6.35□□□□□ -1.39
PDB1YBR221C CYT1P07143 309 aa6.35□□□□□ -1.39
PDB1YBR221C VMA8P32610 256 aaKnown RBP6.35□□□□□ -1.39
PDB1YBR221C ECM32P32644 1121 aaKnown RBP6.35□□□□□ -1.39
PDB1YBR221C MOT2P34909 587 aaKnown RBP6.35□□□□□ -1.39
PDB1YBR221C YBR071WP38243 211 aa6.35□□□□□ -1.39
PDB1YBR221C RIM4P38741 713 aa6.35□□□□□ -1.39
PDB1YBR221C MXR1P40029 184 aa6.35□□□□□ -1.39
PDB1YBR221C SAP155P43612 1002 aa6.35□□□□□ -1.39
PDB1YBR221C PEX21P50091 288 aa6.35□□□□□ -1.39
PDB1YBR221C YGR125WP53273 1036 aa6.35□□□□□ -1.39
PDB1YBR221C BNI5P53890 448 aaKnown RBP6.35□□□□□ -1.39
PDB1YBR221C YSH1Q06224 779 aaPredicted RBP6.35□□□□□ -1.39
PDB1YBR221C GAS4Q08271 471 aa6.35□□□□□ -1.39
PDB1YBR221C APC5Q08683 685 aa6.35□□□□□ -1.39
PDB1YBR221C OXR1Q08952 273 aa6.35□□□□□ -1.39
PDB1YBR221C YRF1-4O13559 1382 aa6.34□□□□□ -1.39
PDB1YBR221C LEU2P04173 364 aaPredicted RBP6.34□□□□□ -1.39
PDB1YBR221C NPR1P22211 790 aa6.34□□□□□ -1.39
PDB1YBR221C VAN1P23642 535 aa6.34□□□□□ -1.39
PDB1YBR221C DBP1P24784 617 aaKnown RBP6.34□□□□□ -1.39
PDB1YBR221C RAD51P25454 400 aa6.34□□□□□ -1.39
PDB1YBR221C PTP2P29461 750 aa6.34□□□□□ -1.39
PDB1YBR221C TPD3P31383 635 aa6.34□□□□□ -1.39
PDB1YBR221C IMP2'P32351 346 aa6.34□□□□□ -1.39
PDB1YBR221C ATG3P40344 310 aa6.34□□□□□ -1.39
PDB1YBR221C TMA108P40462 946 aa6.34□□□□□ -1.39
PDB1YBR221C YNL034WP53963 612 aa6.34□□□□□ -1.39
PDB1YBR221C YNL018CP53976 612 aa6.34□□□□□ -1.39
PDB1YBR221C TIM11P81449 96 aaPredicted RBP6.34□□□□□ -1.39
PDB1YBR221C UTP13Q05946 817 aaKnown RBP6.34□□□□□ -1.39
PDB1YBR221C RSC2Q06488 889 aa6.34□□□□□ -1.39
PDB1YBR221C SPN1Q06505 410 aaPredicted RBP6.34□□□□□ -1.39
PDB1YBR221C SPO75Q07798 868 aa6.34□□□□□ -1.39
PDB1YBR221C YPL191CQ08930 360 aa6.34□□□□□ -1.39
PDB1YBR221C DBP10Q12389 995 aaKnown RBP6.34□□□□□ -1.39
PDB1YBR221C OSH2Q12451 1283 aa6.34□□□□□ -1.39
PDB1YBR221C TRS33Q99394 268 aa6.34□□□□□ -1.39
PDB1YBR221C GAL1P04385 528 aa6.33□□□□□ -1.4
PDB1YBR221C CDC34P14682 295 aa6.33□□□□□ -1.4
PDB1YBR221C CHS3P29465 1165 aa6.33□□□□□ -1.4
PDB1YBR221C MRF1P30775 413 aaPredicted RBP6.33□□□□□ -1.4
PDB1YBR221C ISF1P32488 338 aa6.33□□□□□ -1.4
PDB1YBR221C NOP4P37838 685 aaKnown RBP6.33□□□□□ -1.4
PDB1YBR221C ENV11P53246 860 aa6.33□□□□□ -1.4
PDB1YBR221C YGR273CP53329 174 aa6.33□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms