RNA–Protein interactions for RNA: YBR182C

SMP1, Transcript of MADS-box transcription factor involved in osmotic stress response, yeast

Gene SMP1, Length 1,359 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMP1	YBR182C	NAR1	P23503	491 aa	Known RBP	6.22	□□□□□ -1.41
SMP1	YBR182C	MRP8	P35719	219 aa		6.22	□□□□□ -1.41
SMP1	YBR182C	ISW1	P38144	1129 aa		6.22	□□□□□ -1.41
SMP1	YBR182C	PIC2	P40035	300 aa		6.22	□□□□□ -1.41
SMP1	YBR182C	FOL1	P53848	824 aa		6.22	□□□□□ -1.41
SMP1	YBR182C	GIS4	Q04233	774 aa		6.22	□□□□□ -1.41
SMP1	YBR182C	GIN4	Q12263	1142 aa		6.22	□□□□□ -1.41
SMP1	YBR182C	CAN1	P04817	590 aa		6.21	□□□□□ -1.41
SMP1	YBR182C	KAR1	P11927	433 aa		6.21	□□□□□ -1.41
SMP1	YBR182C	RPL8B	P29453	256 aa	Known RBP	6.21	□□□□□ -1.41
SMP1	YBR182C	UGA4	P32837	571 aa		6.21	□□□□□ -1.41
SMP1	YBR182C	SEC6	P32844	805 aa		6.21	□□□□□ -1.41
SMP1	YBR182C	ENP1	P38333	483 aa	Known RBP	6.21	□□□□□ -1.41
SMP1	YBR182C	RVS167	P39743	482 aa	Known RBP	6.21	□□□□□ -1.41
SMP1	YBR182C	IRR1	P40541	1150 aa		6.21	□□□□□ -1.41
SMP1	YBR182C	HUL4	P40985	892 aa		6.21	□□□□□ -1.41
SMP1	YBR182C	ITC1	P53125	1264 aa		6.21	□□□□□ -1.41
SMP1	YBR182C	BUD9	P53226	547 aa		6.21	□□□□□ -1.41
SMP1	YBR182C	SHE9	Q04172	456 aa		6.21	□□□□□ -1.41
SMP1	YBR182C	MRL1	Q06815	381 aa		6.21	□□□□□ -1.41
SMP1	YBR182C	AGP1	P25376	633 aa		6.2	□□□□□ -1.42
SMP1	YBR182C	MSH2	P25847	964 aa		6.2	□□□□□ -1.42
SMP1	YBR182C	SQT1	P35184	431 aa		6.2	□□□□□ -1.42
SMP1	YBR182C	RRM3	P38766	723 aa		6.2	□□□□□ -1.42
SMP1	YBR182C	ZDS1	P50111	915 aa	Known RBP	6.2	□□□□□ -1.42
SMP1	YBR182C	MON1	P53129	644 aa		6.2	□□□□□ -1.42
SMP1	YBR182C	ERP6	P53198	216 aa		6.2	□□□□□ -1.42
SMP1	YBR182C	EEB1	Q02891	456 aa		6.2	□□□□□ -1.42
SMP1	YBR182C	CEF1	Q03654	590 aa	Predicted RBP	6.2	□□□□□ -1.42
SMP1	YBR182C	SPO20	Q04359	397 aa		6.2	□□□□□ -1.42
SMP1	YBR182C	ARE1	P25628	610 aa		6.19	□□□□□ -1.42
SMP1	YBR182C	STE5	P32917	917 aa		6.19	□□□□□ -1.42
SMP1	YBR182C	GIP1	P38229	639 aa		6.19	□□□□□ -1.42
SMP1	YBR182C	NUT1	P53114	1132 aa		6.19	□□□□□ -1.42
SMP1	YBR182C	ECM16	Q04217	1267 aa	Known RBP	6.19	□□□□□ -1.42
SMP1	YBR182C	EAF1	Q06337	982 aa		6.19	□□□□□ -1.42
SMP1	YBR182C	FMP25	Q08023	583 aa		6.19	□□□□□ -1.42
SMP1	YBR182C	NTG2	Q08214	380 aa		6.19	□□□□□ -1.42
SMP1	YBR182C	RPL8A	P17076	256 aa	Known RBP	6.18	□□□□□ -1.42
SMP1	YBR182C	SAC7	P17121	654 aa		6.18	□□□□□ -1.42
SMP1	YBR182C	PWP2	P25635	923 aa	Known RBP	6.18	□□□□□ -1.42
SMP1	YBR182C	AIM46	P38885	310 aa		6.18	□□□□□ -1.42
SMP1	YBR182C	GEM1	P39722	662 aa		6.18	□□□□□ -1.42
SMP1	YBR182C	XKS1	P42826	600 aa		6.18	□□□□□ -1.42
SMP1	YBR182C	RSM26	P47141	266 aa		6.18	□□□□□ -1.42
SMP1	YBR182C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	6.18	□□□□□ -1.42	not detected
SMP1	YBR182C	VMS1	Q04311	632 aa	Known RBP	6.18	□□□□□ -1.42
SMP1	YBR182C	RSC2	Q06488	889 aa		6.18	□□□□□ -1.42
SMP1	YBR182C	TAF13	P11747	167 aa		6.18	□□□□□ -1.42
SMP1	YBR182C	DPB3	P27344	201 aa		6.18	□□□□□ -1.42
SMP1	YBR182C	SBA1	P28707	216 aa	Known RBP	6.18	□□□□□ -1.42
SMP1	YBR182C	HLJ1	P48353	224 aa		6.18	□□□□□ -1.42
SMP1	YBR182C	UGO1	Q03327	502 aa		6.18	□□□□□ -1.42
SMP1	YBR182C	MSH6	Q03834	1242 aa		6.18	□□□□□ -1.42
SMP1	YBR182C	YOR296W	Q08748	1289 aa		6.18	□□□□□ -1.42
SMP1	YBR182C	SLP1	Q12232	587 aa		6.18	□□□□□ -1.42
SMP1	YBR182C	VPS24	P36095	224 aa	Known RBP	6.17	□□□□□ -1.42
SMP1	YBR182C	VBA5	P36172	582 aa		6.17	□□□□□ -1.42
SMP1	YBR182C	PBY1	P38254	753 aa		6.17	□□□□□ -1.42
SMP1	YBR182C	ALO1	P54783	526 aa	Known RBP	6.17	□□□□□ -1.42
SMP1	YBR182C	PMT7	Q06644	662 aa		6.17	□□□□□ -1.42
SMP1	YBR182C	YDL121C	Q07541	149 aa		6.17	□□□□□ -1.42
SMP1	YBR182C	AI3	P03877	415 aa		6.16	□□□□□ -1.42
SMP1	YBR182C	IDI1	P15496	288 aa		6.16	□□□□□ -1.42
SMP1	YBR182C	PMT3	P47190	753 aa		6.16	□□□□□ -1.42
SMP1	YBR182C	PEX8	P53248	589 aa		6.16	□□□□□ -1.42
SMP1	YBR182C	CTR9	P89105	1077 aa		6.16	□□□□□ -1.42
SMP1	YBR182C	COQ2	P32378	372 aa		6.15	□□□□□ -1.43
SMP1	YBR182C	LYP1	P32487	611 aa		6.15	□□□□□ -1.43
SMP1	YBR182C	OMA1	P36163	345 aa		6.15	□□□□□ -1.43
SMP1	YBR182C	YER156C	P40093	338 aa	Known RBP	6.15	□□□□□ -1.43
SMP1	YBR182C	YGR237C	P50089	785 aa		6.15	□□□□□ -1.43
SMP1	YBR182C	UTP8	P53276	713 aa	Known RBP	6.15	□□□□□ -1.43
SMP1	YBR182C	TFB2	Q02939	513 aa		6.15	□□□□□ -1.43
SMP1	YBR182C	TRP2	P00899	507 aa	Known RBP	6.14	□□□□□ -1.43
SMP1	YBR182C	RSC6	P25632	483 aa		6.14	□□□□□ -1.43
SMP1	YBR182C	SFA1	P32771	386 aa		6.14	□□□□□ -1.43
SMP1	YBR182C	ABD1	P32783	436 aa	Predicted RBP	6.14	□□□□□ -1.43
SMP1	YBR182C	PEX6	P33760	1030 aa		6.14	□□□□□ -1.43
SMP1	YBR182C	BSD2	P38356	321 aa		6.14	□□□□□ -1.43
SMP1	YBR182C	PEX28	P38848	579 aa		6.14	□□□□□ -1.43
SMP1	YBR182C	GNP1	P48813	663 aa		6.14	□□□□□ -1.43
SMP1	YBR182C	TAF8	Q03750	510 aa		6.14	□□□□□ -1.43
SMP1	YBR182C	TMA64	Q04600	565 aa	Known RBP	6.14	□□□□□ -1.43
SMP1	YBR182C	ESC2	Q06340	456 aa		6.14	□□□□□ -1.43
SMP1	YBR182C	ATG13	Q06628	738 aa		6.14	□□□□□ -1.43
SMP1	YBR182C	YDL124W	Q07551	312 aa	Known RBP	6.14	□□□□□ -1.43
SMP1	YBR182C	GAS5	Q08193	484 aa		6.14	□□□□□ -1.43
SMP1	YBR182C	SLX4	Q12098	748 aa		6.14	□□□□□ -1.43
SMP1	YBR182C	TMA7	Q3E764	64 aa	Known RBP	6.14	□□□□□ -1.43
SMP1	YBR182C	PRP9	P19736	530 aa	Known RBP	6.13	□□□□□ -1.43
SMP1	YBR182C	SCT1	P32784	759 aa		6.13	□□□□□ -1.43
SMP1	YBR182C	SNF7	P39929	240 aa	Known RBP	6.13	□□□□□ -1.43
SMP1	YBR182C	SAP155	P43612	1002 aa		6.13	□□□□□ -1.43
SMP1	YBR182C	YJL181W	P46987	611 aa		6.13	□□□□□ -1.43
SMP1	YBR182C	PFD1	P46988	109 aa		6.13	□□□□□ -1.43
SMP1	YBR182C	HSV2	P50079	448 aa	Predicted RBP	6.13	□□□□□ -1.43
SMP1	YBR182C	ARI1	P53111	347 aa	Known RBP	6.13	□□□□□ -1.43
SMP1	YBR182C	YGL140C	P53120	1219 aa		6.13	□□□□□ -1.43
SMP1	YBR182C	EMG1	Q06287	252 aa	Known RBP	6.13	□□□□□ -1.43

Retrieved 100 of 5,963 RNA–protein pairs in 70.5 ms