RNA–Protein interactions for RNA: YAL062W

GDH3, Transcript of NADP(+)-dependent glutamate dehydrogenase, yeast

Gene GDH3, Length 1,374 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GDH3	YAL062W	RRT6	P53117	311 aa	Predicted RBP	11.79	□□□□□ -0.52
GDH3	YAL062W	RET3	P53600	189 aa		11.79	□□□□□ -0.52
GDH3	YAL062W	VIP1	Q06685	1146 aa	Known RBP	11.79	□□□□□ -0.52
GDH3	YAL062W	TYW1	Q08960	810 aa	Known RBP	11.79	□□□□□ -0.52
GDH3	YAL062W	RPL8A	P17076	256 aa	Known RBP	11.78	□□□□□ -0.52
GDH3	YAL062W	MCM3	P24279	971 aa	Known RBP	11.78	□□□□□ -0.52
GDH3	YAL062W	URA1	P28272	314 aa	Predicted RBP	11.78	□□□□□ -0.52
GDH3	YAL062W	YIL089W	P40500	205 aa		11.78	□□□□□ -0.52
GDH3	YAL062W	YPT11	P48559	417 aa		11.78	□□□□□ -0.52
GDH3	YAL062W	CUE3	P53137	624 aa	Known RBP	11.78	□□□□□ -0.52
GDH3	YAL062W	UTP4	Q06679	776 aa	Known RBP	11.78	□□□□□ -0.52
GDH3	YAL062W	PTC5	Q12511	572 aa		11.78	□□□□□ -0.52
GDH3	YAL062W	OCT1	P35999	772 aa		11.77	□□□□□ -0.53
GDH3	YAL062W	RTC4	P53850	401 aa		11.77	□□□□□ -0.53
GDH3	YAL062W	EIS1	Q05050	843 aa	Known RBP	11.77	□□□□□ -0.53
GDH3	YAL062W	SUE1	Q06524	206 aa		11.77	□□□□□ -0.53
GDH3	YAL062W	YOR296W	Q08748	1289 aa		11.77	□□□□□ -0.53
GDH3	YAL062W	THR4	P16120	514 aa	Known RBP	11.76	□□□□□ -0.53
GDH3	YAL062W	ALG1	P16661	449 aa		11.76	□□□□□ -0.53
GDH3	YAL062W	SSA4	P22202	642 aa	Known RBP	11.76	□□□□□ -0.53
GDH3	YAL062W	SMD2	Q06217	110 aa	Known RBP	11.76	□□□□□ -0.53
GDH3	YAL062W	RPL22A	P05749	121 aa	Known RBP	11.75	□□□□□ -0.53
GDH3	YAL062W	GPA1	P08539	472 aa		11.75	□□□□□ -0.53
GDH3	YAL062W	PER1	P25625	357 aa		11.75	□□□□□ -0.53
GDH3	YAL062W	MCM4	P30665	933 aa	Known RBP	11.75	□□□□□ -0.53
GDH3	YAL062W	YKT6	P36015	200 aa	Known RBP	11.75	□□□□□ -0.53
GDH3	YAL062W	STT3	P39007	718 aa	Known RBP	11.75	□□□□□ -0.53
GDH3	YAL062W	LYS14	P40971	790 aa		11.75	□□□□□ -0.53
GDH3	YAL062W	YML037C	Q03703	340 aa		11.75	□□□□□ -0.53
GDH3	YAL062W	MMR1	Q06324	491 aa		11.75	□□□□□ -0.53
GDH3	YAL062W	FBP1	P09201	348 aa		11.74	□□□□□ -0.53
GDH3	YAL062W	RAD18	P10862	487 aa		11.74	□□□□□ -0.53
GDH3	YAL062W	PWP2	P25635	923 aa	Known RBP	11.74	□□□□□ -0.53
GDH3	YAL062W	SAS3	P34218	831 aa		11.74	□□□□□ -0.53
GDH3	YAL062W	NPR3	P38742	1146 aa		11.74	□□□□□ -0.53
GDH3	YAL062W	YER130C	P39959	443 aa		11.74	□□□□□ -0.53
GDH3	YAL062W	BNI5	P53890	448 aa	Known RBP	11.74	□□□□□ -0.53
GDH3	YAL062W	TRS120	Q04183	1289 aa		11.74	□□□□□ -0.53
GDH3	YAL062W	CSM3	Q04659	317 aa		11.74	□□□□□ -0.53
GDH3	YAL062W	SLK19	Q08581	821 aa	Known RBP	11.74	□□□□□ -0.53
GDH3	YAL062W	TRS33	Q99394	268 aa		11.74	□□□□□ -0.53
GDH3	YAL062W	BMH1	P29311	267 aa	Known RBP	11.73	□□□□□ -0.53
GDH3	YAL062W	RKM3	P38222	552 aa		11.73	□□□□□ -0.53
GDH3	YAL062W	PAN5	P38787	379 aa		11.73	□□□□□ -0.53
GDH3	YAL062W	YJL007C	P47080	104 aa		11.73	□□□□□ -0.53
GDH3	YAL062W	FMS1	P50264	508 aa		11.73	□□□□□ -0.53
GDH3	YAL062W	RSC1	P53236	928 aa		11.73	□□□□□ -0.53
GDH3	YAL062W	PEX29	Q03370	554 aa		11.73	□□□□□ -0.53
GDH3	YAL062W	SRO9	P25567	434 aa	Known RBP	11.72	□□□□□ -0.53
GDH3	YAL062W	PHO88	P38264	188 aa	Predicted RBP	11.72	□□□□□ -0.53
GDH3	YAL062W	VAB2	P40003	282 aa		11.72	□□□□□ -0.53
GDH3	YAL062W	DAK2	P43550	591 aa		11.72	□□□□□ -0.53
GDH3	YAL062W	DSE4	P53753	1117 aa		11.72	□□□□□ -0.53
GDH3	YAL062W	LCD1	Q04377	747 aa		11.72	□□□□□ -0.53
GDH3	YAL062W	MYO1	P08964	1928 aa		11.72	□□□□□ -0.53
GDH3	YAL062W	TAF13	P11747	167 aa		11.71	□□□□□ -0.53
GDH3	YAL062W	YDJ1	P25491	409 aa	Known RBP	11.71	□□□□□ -0.53
GDH3	YAL062W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	11.71	□□□□□ -0.53	RIP-Chip
GDH3	YAL062W	ATG32	P40458	529 aa		11.7	□□□□□ -0.54
GDH3	YAL062W	CIT3	P43635	486 aa		11.7	□□□□□ -0.54
GDH3	YAL062W	NET1	P47035	1189 aa		11.7	□□□□□ -0.54
GDH3	YAL062W	SGD1	Q06132	899 aa		11.7	□□□□□ -0.54
GDH3	YAL062W	UBX5	Q06682	500 aa		11.7	□□□□□ -0.54
GDH3	YAL062W	UGA4	P32837	571 aa		11.69	□□□□□ -0.54
GDH3	YAL062W	NDT80	P38830	627 aa		11.69	□□□□□ -0.54
GDH3	YAL062W	ALD6	P54115	500 aa	Known RBP	11.69	□□□□□ -0.54
GDH3	YAL062W	TGL1	P34163	548 aa		11.68	□□□□□ -0.54
GDH3	YAL062W	SUL1	P38359	859 aa		11.68	□□□□□ -0.54
GDH3	YAL062W	RRM3	P38766	723 aa		11.68	□□□□□ -0.54
GDH3	YAL062W	THI6	P41835	540 aa		11.68	□□□□□ -0.54
GDH3	YAL062W	YGR153W	P48238	217 aa		11.68	□□□□□ -0.54
GDH3	YAL062W	SDA1	P53313	767 aa	Known RBP	11.68	□□□□□ -0.54
GDH3	YAL062W	VMS1	Q04311	632 aa	Known RBP	11.68	□□□□□ -0.54
GDH3	YAL062W	TMA64	Q04600	565 aa	Known RBP	11.68	□□□□□ -0.54
GDH3	YAL062W	FOB1	O13329	566 aa		11.67	□□□□□ -0.54
GDH3	YAL062W	HIS4	P00815	799 aa	Known RBP	11.67	□□□□□ -0.54
GDH3	YAL062W	GSY2	P27472	705 aa		11.67	□□□□□ -0.54
GDH3	YAL062W	CAB3	P36076	571 aa		11.67	□□□□□ -0.54
GDH3	YAL062W	ORC6	P38826	435 aa		11.67	□□□□□ -0.54
GDH3	YAL062W	LIF1	P53150	421 aa		11.67	□□□□□ -0.54
GDH3	YAL062W	OXR1	Q08952	273 aa		11.67	□□□□□ -0.54
GDH3	YAL062W	TUF1	P02992	437 aa	Known RBP	11.67	□□□□□ -0.54
GDH3	YAL062W	ATE1	P16639	503 aa		11.67	□□□□□ -0.54
GDH3	YAL062W	HIR1	P32479	840 aa		11.67	□□□□□ -0.54
GDH3	YAL062W	SRP40	P32583	406 aa	Predicted RBP	11.67	□□□□□ -0.54
GDH3	YAL062W	BUL2	Q03758	920 aa	Known RBP	11.67	□□□□□ -0.54
GDH3	YAL062W	SPH1	Q06160	661 aa		11.67	□□□□□ -0.54
GDH3	YAL062W	GUD1	Q07729	489 aa		11.67	□□□□□ -0.54
GDH3	YAL062W	ARP6	Q12509	438 aa		11.67	□□□□□ -0.54
GDH3	YAL062W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	11.66	□□□□□ -0.54	not detected
GDH3	YAL062W	HVG1	P0CE11	249 aa		11.66	□□□□□ -0.54
GDH3	YAL062W	MCD4	P36051	919 aa		11.66	□□□□□ -0.54
GDH3	YAL062W	YKR018C	P36114	725 aa		11.66	□□□□□ -0.54
GDH3	YAL062W	ISW1	P38144	1129 aa		11.66	□□□□□ -0.54
GDH3	YAL062W	BSD2	P38356	321 aa		11.66	□□□□□ -0.54
GDH3	YAL062W	GAA1	P39012	614 aa		11.66	□□□□□ -0.54
GDH3	YAL062W	UBA2	P52488	636 aa		11.66	□□□□□ -0.54
GDH3	YAL062W	YGR273C	P53329	174 aa		11.66	□□□□□ -0.54
GDH3	YAL062W	MFM1	Q02783	413 aa		11.66	□□□□□ -0.54
GDH3	YAL062W	OYE2	Q03558	400 aa	Known RBP	11.66	□□□□□ -0.54

Retrieved 100 of 5,963 RNA–protein pairs in 127.2 ms