RNA–Protein interactions for RNA: YAL011W

SWC3, Transcript of Protein of unknown function, yeast

Gene SWC3, Length 1,878 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWC3	YAL011W	HSE1	P38753	452 aa		5.19	□□□□□ -1.58
SWC3	YAL011W	CIR1	P42940	261 aa		5.19	□□□□□ -1.58
SWC3	YAL011W	MTO1	P53070	669 aa		5.19	□□□□□ -1.58
SWC3	YAL011W	HST1	P53685	503 aa		5.19	□□□□□ -1.58
SWC3	YAL011W	UBP16	Q02863	499 aa		5.19	□□□□□ -1.58
SWC3	YAL011W	RPN7	Q06103	429 aa	Known RBP	5.19	□□□□□ -1.58
SWC3	YAL011W	MCM16	Q12262	181 aa		5.19	□□□□□ -1.58
SWC3	YAL011W	TMA7	Q3E764	64 aa	Known RBP	5.19	□□□□□ -1.58
SWC3	YAL011W	RPT1	P33299	467 aa	Known RBP	5.18	□□□□□ -1.58
SWC3	YAL011W	TFC3	P34111	1160 aa		5.18	□□□□□ -1.58
SWC3	YAL011W	DEF1	P35732	738 aa	Known RBP	5.18	□□□□□ -1.58
SWC3	YAL011W	PBY1	P38254	753 aa		5.18	□□□□□ -1.58
SWC3	YAL011W	FAS2	P19097	1887 aa	Known RBP	5.18	□□□□□ -1.58
SWC3	YAL011W	RPL19A	P0CX82	189 aa	Known RBP	5.17	□□□□□ -1.58
SWC3	YAL011W	RPL19B	P0CX83	189 aa	Predicted RBP	5.17	□□□□□ -1.58
SWC3	YAL011W	PHO87	P25360	923 aa		5.17	□□□□□ -1.58
SWC3	YAL011W	VID27	P40157	782 aa		5.17	□□□□□ -1.58
SWC3	YAL011W	RPN11	P43588	306 aa	Known RBP	5.17	□□□□□ -1.58
SWC3	YAL011W	CWH41	P53008	833 aa		5.17	□□□□□ -1.58
SWC3	YAL011W	YNL193W	P53870	558 aa		5.17	□□□□□ -1.58
SWC3	YAL011W	TLG1	Q03322	224 aa		5.17	□□□□□ -1.58
SWC3	YAL011W	NYV1	Q12255	253 aa		5.17	□□□□□ -1.58
SWC3	YAL011W	PGA3	Q12746	312 aa	Known RBP	5.17	□□□□□ -1.58
SWC3	YAL011W	FOB1	O13329	566 aa		5.17	□□□□□ -1.58
SWC3	YAL011W	PIF1	P07271	859 aa		5.17	□□□□□ -1.58
SWC3	YAL011W	MPH2	P0CD99	609 aa		5.17	□□□□□ -1.58
SWC3	YAL011W	MPH3	P0CE00	602 aa		5.17	□□□□□ -1.58
SWC3	YAL011W	SIT4	P20604	311 aa		5.17	□□□□□ -1.58
SWC3	YAL011W	SCJ1	P25303	377 aa		5.17	□□□□□ -1.58
SWC3	YAL011W	PRP40	P33203	583 aa	Known RBP	5.17	□□□□□ -1.58
SWC3	YAL011W	RVS167	P39743	482 aa	Known RBP	5.17	□□□□□ -1.58
SWC3	YAL011W	ENT3	P47160	408 aa		5.17	□□□□□ -1.58
SWC3	YAL011W	CTF18	P49956	741 aa		5.17	□□□□□ -1.58
SWC3	YAL011W	RSC1	P53236	928 aa		5.17	□□□□□ -1.58
SWC3	YAL011W	YOL036W	Q08206	761 aa		5.17	□□□□□ -1.58
SWC3	YAL011W	GRE2	Q12068	342 aa	Known RBP	5.17	□□□□□ -1.58
SWC3	YAL011W	APC11	Q12157	165 aa		5.17	□□□□□ -1.58
SWC3	YAL011W	MSB4	Q12317	492 aa		5.17	□□□□□ -1.58
SWC3	YAL011W	VMA1	P17255	1071 aa	Known RBP	5.16	□□□□□ -1.58
SWC3	YAL011W	PET112	P33893	541 aa		5.16	□□□□□ -1.58
SWC3	YAL011W	YHR020W	P38708	688 aa	Known RBP	5.16	□□□□□ -1.58
SWC3	YAL011W	CIC1	P38779	376 aa	Known RBP	5.16	□□□□□ -1.58
SWC3	YAL011W	VID28	P40547	921 aa		5.16	□□□□□ -1.58
SWC3	YAL011W	MVP1	P40959	511 aa	Known RBP	5.16	□□□□□ -1.58
SWC3	YAL011W	YJL181W	P46987	611 aa		5.16	□□□□□ -1.58
SWC3	YAL011W	DID4	P36108	232 aa		5.15	□□□□□ -1.58
SWC3	YAL011W	JNM1	P36224	373 aa		5.15	□□□□□ -1.58
SWC3	YAL011W	SPO22	P40511	975 aa		5.15	□□□□□ -1.58
SWC3	YAL011W	HYR1	P40581	163 aa	Known RBP	5.15	□□□□□ -1.58
SWC3	YAL011W	SPR3	P41901	512 aa		5.15	□□□□□ -1.58
SWC3	YAL011W	SRB7	P47822	140 aa		5.15	□□□□□ -1.58
SWC3	YAL011W	YGR273C	P53329	174 aa		5.15	□□□□□ -1.58
SWC3	YAL011W	ARP5	P53946	755 aa		5.15	□□□□□ -1.58
SWC3	YAL011W	NAN1	Q02931	896 aa	Known RBP	5.15	□□□□□ -1.58
SWC3	YAL011W	SXM1	Q04175	944 aa	Known RBP	5.15	□□□□□ -1.58
SWC3	YAL011W	TRS120	Q04183	1289 aa		5.15	□□□□□ -1.58
SWC3	YAL011W	LCD1	Q04377	747 aa		5.15	□□□□□ -1.58
SWC3	YAL011W	SAC3	P46674	1301 aa		5.15	□□□□□ -1.59
SWC3	YAL011W	TPM1	P17536	199 aa	Known RBP	5.15	□□□□□ -1.59
SWC3	YAL011W	DBP1	P24784	617 aa	Known RBP	5.15	□□□□□ -1.59
SWC3	YAL011W	THI4	P32318	326 aa		5.15	□□□□□ -1.59
SWC3	YAL011W	PRX1	P34227	261 aa	Known RBP	5.15	□□□□□ -1.59
SWC3	YAL011W	TRZ1	P36159	838 aa	Predicted RBP	5.15	□□□□□ -1.59
SWC3	YAL011W	RKM3	P38222	552 aa		5.15	□□□□□ -1.59
SWC3	YAL011W	YMR147W	P40218	223 aa	Known RBP	5.15	□□□□□ -1.59
SWC3	YAL011W	RSM25	P40496	264 aa		5.15	□□□□□ -1.59
SWC3	YAL011W	ROM1	P53046	1155 aa		5.15	□□□□□ -1.59
SWC3	YAL011W	UBX4	P54730	416 aa		5.15	□□□□□ -1.59
SWC3	YAL011W	PEX19	Q07418	342 aa		5.15	□□□□□ -1.59
SWC3	YAL011W	GPI13	Q07830	1017 aa		5.15	□□□□□ -1.59
SWC3	YAL011W	LSO1	Q3E827	93 aa		5.15	□□□□□ -1.59
SWC3	YAL011W	ADR1	P07248	1323 aa		5.14	□□□□□ -1.59
SWC3	YAL011W	GCD6	P32501	712 aa	Known RBP	5.14	□□□□□ -1.59
SWC3	YAL011W	DAS1	P47005	663 aa		5.14	□□□□□ -1.59
SWC3	YAL011W	HOS2	P53096	452 aa	Predicted RBP	5.14	□□□□□ -1.59
SWC3	YAL011W	PEX14	P53112	341 aa		5.14	□□□□□ -1.59
SWC3	YAL011W	PUS1	Q12211	544 aa	Known RBP	5.14	□□□□□ -1.59
SWC3	YAL011W	TMA17	Q12513	150 aa		5.14	□□□□□ -1.59
SWC3	YAL011W	TY1B-A	O13527	1196 aa	Known RBP	5.13	□□□□□ -1.59
SWC3	YAL011W	CPA2	P03965	1118 aa	Known RBP	5.13	□□□□□ -1.59
SWC3	YAL011W	CYC8	P14922	966 aa		5.13	□□□□□ -1.59
SWC3	YAL011W	RPL8A	P17076	256 aa	Known RBP	5.13	□□□□□ -1.59
SWC3	YAL011W	GAP1	P19145	602 aa	Predicted RBP	5.13	□□□□□ -1.59
SWC3	YAL011W	MBR1	P23493	339 aa		5.13	□□□□□ -1.59
SWC3	YAL011W	IMP2'	P32351	346 aa		5.13	□□□□□ -1.59
SWC3	YAL011W	NGR1	P32831	672 aa	Known RBP	5.13	□□□□□ -1.59
SWC3	YAL011W	RRN3	P36070	627 aa		5.13	□□□□□ -1.59
SWC3	YAL011W	OSH3	P38713	996 aa	Known RBP	5.13	□□□□□ -1.59
SWC3	YAL011W	YAP1801	P38856	637 aa		5.13	□□□□□ -1.59
SWC3	YAL011W	NPR2	P39923	615 aa		5.13	□□□□□ -1.59
SWC3	YAL011W	TIM54	P47045	478 aa		5.13	□□□□□ -1.59
SWC3	YAL011W	CWC24	P53769	259 aa		5.13	□□□□□ -1.59
SWC3	YAL011W	KRE33	P53914	1056 aa	Known RBP	5.13	□□□□□ -1.59
SWC3	YAL011W	PUN1	Q06991	263 aa		5.13	□□□□□ -1.59
SWC3	YAL011W	CTI6	Q08923	506 aa		5.13	□□□□□ -1.59
SWC3	YAL011W	LAM4	P38800	1345 aa		5.13	□□□□□ -1.59
SWC3	YAL011W	CIT1	P00890	479 aa		5.13	□□□□□ -1.59
SWC3	YAL011W	PGI1	P12709	554 aa	Known RBP	5.13	□□□□□ -1.59
SWC3	YAL011W	HIR1	P32479	840 aa		5.13	□□□□□ -1.59
SWC3	YAL011W	PEP7	P32609	515 aa		5.13	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 61.7 ms