RNA–Protein interactions for RNA: ENST00000470197.5

GCFC2-205, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 1 (best)

Gene GCFC2, Length 3,648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-205ENST00000470197 SCTRP47872 440 aa7.15□□□□□ -1.26
GCFC2-205ENST00000470197 FKBP4Q02790 459 aaKnown RBP eCLIP7.15□□□□□ -1.26
GCFC2-205ENST00000470197 APLP1P51693 650 aa7.14□□□□□ -1.27
GCFC2-205ENST00000470197 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.14□□□□□ -1.27
GCFC2-205ENST00000470197 DOLKQ9UPQ8 538 aa7.14□□□□□ -1.27
GCFC2-205ENST00000470197 GPR182O15218 404 aa7.14□□□□□ -1.27
GCFC2-205ENST00000470197 NLGN1Q8N2Q7 840 aa7.14□□□□□ -1.27
GCFC2-205ENST00000470197 PARP2Q9UGN5 583 aa7.14□□□□□ -1.27
GCFC2-205ENST00000470197 ERCC6Q03468 1493 aa7.14□□□□□ -1.27
GCFC2-205ENST00000470197 DCAF1Q9Y4B6 1507 aa7.14□□□□□ -1.27
GCFC2-205ENST00000470197 PTPRNQ16849 979 aa7.14□□□□□ -1.27
GCFC2-205ENST00000470197 ZSWIM6Q9HCJ5 1215 aa7.14□□□□□ -1.27
GCFC2-205ENST00000470197 ZBTB39O15060 712 aa7.13□□□□□ -1.27
GCFC2-205ENST00000470197 ACTN4O43707 911 aaKnown RBP7.13□□□□□ -1.27
GCFC2-205ENST00000470197 TREHO43280 583 aa7.13□□□□□ -1.27
GCFC2-205ENST00000470197 SH3BP5LQ7L8J4 393 aa7.13□□□□□ -1.27
GCFC2-205ENST00000470197 EVA1BQ9NVM1 165 aa7.13□□□□□ -1.27
GCFC2-205ENST00000470197 NOD1Q9Y239 953 aa7.13□□□□□ -1.27
GCFC2-205ENST00000470197 ZFRQ96KR1 1074 aaKnown RBP7.13□□□□□ -1.27
GCFC2-205ENST00000470197 DUSP9Q99956 384 aaKnown RBP7.13□□□□□ -1.27
GCFC2-205ENST00000470197 TANGO6Q9C0B7 1094 aa7.12□□□□□ -1.27
GCFC2-205ENST00000470197 PCDHGB7Q9Y5F8 929 aa7.12□□□□□ -1.27
GCFC2-205ENST00000470197 MAGEB6P1A0A0J9YX57 407 aa7.12□□□□□ -1.27
GCFC2-205ENST00000470197 FMR1Q06787 632 aaKnown RBP eCLIP7.12□□□□□ -1.27
GCFC2-205ENST00000470197 PDXDC2PQ6P474 469 aa7.12□□□□□ -1.27
GCFC2-205ENST00000470197 ATCAYQ86WG3 371 aa7.12□□□□□ -1.27
GCFC2-205ENST00000470197 TMEM87AQ8NBN3 555 aa7.12□□□□□ -1.27
GCFC2-205ENST00000470197 SCAMP3O14828 347 aaKnown RBP7.12□□□□□ -1.27
GCFC2-205ENST00000470197 JUNDP17535 347 aa7.12□□□□□ -1.27
GCFC2-205ENST00000470197 DSC3Q14574 896 aa7.12□□□□□ -1.27
GCFC2-205ENST00000470197 SP7Q8TDD2 431 aaPredicted RBP7.12□□□□□ -1.27
GCFC2-205ENST00000470197 ANKRD62A6NC57 917 aa7.11□□□□□ -1.27
GCFC2-205ENST00000470197 ZNF394Q53GI3 561 aa7.11□□□□□ -1.27
GCFC2-205ENST00000470197 HIRIP3Q9BW71 556 aaPredicted RBP7.11□□□□□ -1.27
GCFC2-205ENST00000470197 PRKAG2Q9UGJ0 569 aa7.11□□□□□ -1.27
GCFC2-205ENST00000470197 VPS9D1Q9Y2B5 631 aa7.11□□□□□ -1.27
GCFC2-205ENST00000470197 MAPK8P45983 427 aa7.11□□□□□ -1.27
GCFC2-205ENST00000470197 PSME1Q06323 249 aa7.11□□□□□ -1.27
GCFC2-205ENST00000470197 MAP7D1Q3KQU3 841 aa7.11□□□□□ -1.27
GCFC2-205ENST00000470197 BHMG1C9JSJ3 638 aaPredicted RBP7.1□□□□□ -1.27
GCFC2-205ENST00000470197 CCDC144BQ3MJ40 725 aa7.1□□□□□ -1.27
GCFC2-205ENST00000470197 SH3RF1Q7Z6J0 888 aa7.1□□□□□ -1.27
GCFC2-205ENST00000470197 FZD6O60353 706 aa7.1□□□□□ -1.27
GCFC2-205ENST00000470197 RACK1P63244 317 aaKnown RBP7.1□□□□□ -1.27
GCFC2-205ENST00000470197 EMILIN1Q9Y6C2 1016 aa7.1□□□□□ -1.27
GCFC2-205ENST00000470197 CTSHP09668 335 aa7.1□□□□□ -1.27
GCFC2-205ENST00000470197 TBCELQ5QJ74 424 aa7.1□□□□□ -1.27
GCFC2-205ENST00000470197 HELQQ8TDG4 1101 aa7.1□□□□□ -1.27
GCFC2-205ENST00000470197 ARHGAP9Q9BRR9 750 aa7.1□□□□□ -1.27
GCFC2-205ENST00000470197 CCNYL3P0C7X3 344 aa7.09□□□□□ -1.27
GCFC2-205ENST00000470197 ATP1A2P50993 1020 aa7.09□□□□□ -1.27
GCFC2-205ENST00000470197 PTK2Q05397 1052 aa7.09□□□□□ -1.27
GCFC2-205ENST00000470197 NUDT12Q9BQG2 462 aa7.09□□□□□ -1.27
GCFC2-205ENST00000470197 TMEM229AB2RXF0 380 aa7.09□□□□□ -1.27
GCFC2-205ENST00000470197 CFHR5Q9BXR6 569 aa7.09□□□□□ -1.27
GCFC2-205ENST00000470197 ZC3H4Q9UPT8 1303 aaKnown RBP7.09□□□□□ -1.27
GCFC2-205ENST00000470197 SBNO2Q9Y2G9 1366 aa7.09□□□□□ -1.27
GCFC2-205ENST00000470197 GTF2F1P35269 517 aaKnown RBP eCLIP7.09□□□□□ -1.27
GCFC2-205ENST00000470197 FOXJ1Q92949 421 aa7.09□□□□□ -1.27
GCFC2-205ENST00000470197 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.08□□□□□ -1.28
GCFC2-205ENST00000470197 RIMBP2O15034 1052 aa7.08□□□□□ -1.28
GCFC2-205ENST00000470197 TLL1O43897 1013 aa7.08□□□□□ -1.28
GCFC2-205ENST00000470197 HOXB1P14653 301 aaPredicted RBP7.08□□□□□ -1.28
GCFC2-205ENST00000470197 EHHADHQ08426 723 aa7.08□□□□□ -1.28
GCFC2-205ENST00000470197 CAPN10Q9HC96 672 aa7.08□□□□□ -1.28
GCFC2-205ENST00000470197 ZSCAN29Q8IWY8 852 aaPredicted RBP7.08□□□□□ -1.28
GCFC2-205ENST00000470197 TNS4Q8IZW8 715 aa7.08□□□□□ -1.28
GCFC2-205ENST00000470197 RBCK1Q9BYM8 510 aa7.08□□□□□ -1.28
GCFC2-205ENST00000470197 LRFN2Q9ULH4 789 aa7.08□□□□□ -1.28
GCFC2-205ENST00000470197 LZTS3O60299 673 aaPredicted RBP7.07□□□□□ -1.28
GCFC2-205ENST00000470197 LDHBP07195 334 aaKnown RBP7.07□□□□□ -1.28
GCFC2-205ENST00000470197 NPR3P17342 541 aa7.07□□□□□ -1.28
GCFC2-205ENST00000470197 SF3A1Q15459 793 aaKnown RBP7.07□□□□□ -1.28
GCFC2-205ENST00000470197 ERFEQ4G0M1 354 aa7.07□□□□□ -1.28
GCFC2-205ENST00000470197 TRIM50Q86XT4 487 aa7.07□□□□□ -1.28
GCFC2-205ENST00000470197 UNC93B1Q9H1C4 597 aa7.07□□□□□ -1.28
GCFC2-205ENST00000470197 A0A1W2PRU2 124 aa7.07□□□□□ -1.28
GCFC2-205ENST00000470197 RAB15P59190 212 aa7.07□□□□□ -1.28
GCFC2-205ENST00000470197 Q3C1V9 767 aa7.07□□□□□ -1.28
GCFC2-205ENST00000470197 TNFRSF10BO14763 440 aa7.07□□□□□ -1.28
GCFC2-205ENST00000470197 DXOO77932 396 aaKnown RBP7.07□□□□□ -1.28
GCFC2-205ENST00000470197 DNAJA1P31689 397 aaKnown RBP7.07□□□□□ -1.28
GCFC2-205ENST00000470197 TSPAN10Q9H1Z9 355 aaPredicted RBP7.07□□□□□ -1.28
GCFC2-205ENST00000470197 GPSM3Q9Y4H4 160 aa7.07□□□□□ -1.28
GCFC2-205ENST00000470197 PSDA5PKW4 1024 aaPredicted RBP7.06□□□□□ -1.28
GCFC2-205ENST00000470197 ZNF358Q9NW07 568 aa7.06□□□□□ -1.28
GCFC2-205ENST00000470197 ESPNB1AK53 854 aa7.06□□□□□ -1.28
GCFC2-205ENST00000470197 EIF1AXP47813 144 aaKnown RBP7.06□□□□□ -1.28
GCFC2-205ENST00000470197 SCNN1DP51172 638 aa7.06□□□□□ -1.28
GCFC2-205ENST00000470197 BCAMP50895 628 aa7.05□□□□□ -1.28
GCFC2-205ENST00000470197 SF3B2Q13435 895 aaKnown RBP7.05□□□□□ -1.28
GCFC2-205ENST00000470197 LINC01559Q495D7 138 aa7.05□□□□□ -1.28
GCFC2-205ENST00000470197 ZBTB33Q86T24 672 aa7.05□□□□□ -1.28
GCFC2-205ENST00000470197 PMFBP1Q8TBY8 1022 aa7.05□□□□□ -1.28
GCFC2-205ENST00000470197 DAB2P98082 770 aa7.05□□□□□ -1.28
GCFC2-205ENST00000470197 PCDHB11Q9Y5F2 797 aa7.05□□□□□ -1.28
GCFC2-205ENST00000470197 EPHA4P54764 986 aa7.05□□□□□ -1.28
GCFC2-205ENST00000470197 DZIP3Q86Y13 1208 aaKnown RBP7.05□□□□□ -1.28
GCFC2-205ENST00000470197 SCG3Q8WXD2 468 aaKnown RBP7.05□□□□□ -1.28
GCFC2-205ENST00000470197 USP3Q9Y6I4 520 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms