RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 AQRO60306 1485 aaKnown RBP eCLIP7.95□□□□□ -1.142e-6■■■■■ 30.2
SSR3-204ENST00000467733 CDC14CA4D256 554 aa7.95□□□□□ -1.14
SSR3-204ENST00000467733 PNMA1Q8ND90 353 aa7.95□□□□□ -1.14
SSR3-204ENST00000467733 SYNJ1O43426 1573 aa7.94□□□□□ -1.14
SSR3-204ENST00000467733 WDR97A6NE52 1622 aa7.94□□□□□ -1.14
SSR3-204ENST00000467733 CTSOP43234 321 aaPredicted RBP7.94□□□□□ -1.14
SSR3-204ENST00000467733 RELBQ01201 579 aa7.94□□□□□ -1.14
SSR3-204ENST00000467733 RNFT1Q5M7Z0 435 aa7.94□□□□□ -1.14
SSR3-204ENST00000467733 POLMQ9NP87 494 aaPredicted RBP7.94□□□□□ -1.14
SSR3-204ENST00000467733 VWA5B2Q8N398 1253 aa7.93□□□□□ -1.14
SSR3-204ENST00000467733 RNF217Q8TC41 542 aa7.93□□□□□ -1.14
SSR3-204ENST00000467733 LRRN4Q8WUT4 740 aa7.93□□□□□ -1.14
SSR3-204ENST00000467733 TRIM52Q96A61 297 aa7.93□□□□□ -1.14
SSR3-204ENST00000467733 AGBL1Q96MI9 1066 aa7.93□□□□□ -1.14
SSR3-204ENST00000467733 INSM2Q96T92 566 aaPredicted RBP7.93□□□□□ -1.14
SSR3-204ENST00000467733 SLC24A3Q9HC58 644 aa7.93□□□□□ -1.14
SSR3-204ENST00000467733 DNMT3AQ9Y6K1 912 aaPredicted RBP7.93□□□□□ -1.14
SSR3-204ENST00000467733 KANK3Q6NY19 840 aa7.92□□□□□ -1.14
SSR3-204ENST00000467733 POLA1P09884 1462 aaPredicted RBP7.92□□□□□ -1.14
SSR3-204ENST00000467733 ARHGEF15O94989 841 aa7.91□□□□□ -1.14
SSR3-204ENST00000467733 ADH1AP07327 375 aa7.91□□□□□ -1.14
SSR3-204ENST00000467733 NR6A1Q15406 480 aa7.91□□□□□ -1.14
SSR3-204ENST00000467733 ADAM32Q8TC27 787 aa7.91□□□□□ -1.14
SSR3-204ENST00000467733 SNAPC4Q5SXM2 1469 aa7.9□□□□□ -1.14
SSR3-204ENST00000467733 IGHA1P01876 353 aa7.9□□□□□ -1.14
SSR3-204ENST00000467733 MARSP56192 900 aaKnown RBP7.9□□□□□ -1.14
SSR3-204ENST00000467733 FOXK2Q01167 660 aa7.9□□□□□ -1.14
SSR3-204ENST00000467733 SKIV2LQ15477 1246 aaKnown RBP7.9□□□□□ -1.14
SSR3-204ENST00000467733 SCARF2Q96GP6 870 aaPredicted RBP7.9□□□□□ -1.14
SSR3-204ENST00000467733 CCDC88BA6NC98 1476 aa7.89□□□□□ -1.15
SSR3-204ENST00000467733 MAGI1Q96QZ7 1491 aaPredicted RBP7.89□□□□□ -1.15
SSR3-204ENST00000467733 SENP3-EIF4A1A0A087X0R7 540 aa7.89□□□□□ -1.15
SSR3-204ENST00000467733 MAP3K10Q02779 954 aa7.89□□□□□ -1.15
SSR3-204ENST00000467733 SH3D19Q5HYK7 790 aa7.89□□□□□ -1.15
SSR3-204ENST00000467733 PPP2R2DQ66LE6 453 aa7.89□□□□□ -1.15
SSR3-204ENST00000467733 ZNF784Q8NCA9 323 aaPredicted RBP7.89□□□□□ -1.15
SSR3-204ENST00000467733 OCSTAMPQ9BR26 566 aa7.89□□□□□ -1.15
SSR3-204ENST00000467733 ADAMTS2O95450 1211 aa7.88□□□□□ -1.15
SSR3-204ENST00000467733 IRS1P35568 1242 aa7.88□□□□□ -1.15
SSR3-204ENST00000467733 SRSF11Q05519 484 aaKnown RBP7.88□□□□□ -1.15
SSR3-204ENST00000467733 WHAMMQ8TF30 809 aa7.88□□□□□ -1.15
SSR3-204ENST00000467733 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.88□□□□□ -1.15
SSR3-204ENST00000467733 ZNF395Q9H8N7 513 aaPredicted RBP7.88□□□□□ -1.15
SSR3-204ENST00000467733 GAPVD1Q14C86 1478 aa7.87□□□□□ -1.15
SSR3-204ENST00000467733 LYSMD3Q7Z3D4 306 aa7.87□□□□□ -1.15
SSR3-204ENST00000467733 DZIP3Q86Y13 1208 aaKnown RBP7.87□□□□□ -1.15
SSR3-204ENST00000467733 TMPRSS4Q9NRS4 437 aa7.87□□□□□ -1.15
SSR3-204ENST00000467733 KIF13AQ9H1H9 1805 aa7.87□□□□□ -1.15
SSR3-204ENST00000467733 PBRM1Q86U86 1689 aa7.86□□□□□ -1.15
SSR3-204ENST00000467733 PTGIRP43119 386 aa7.86□□□□□ -1.15
SSR3-204ENST00000467733 FOXD4L5Q5VV16 416 aaPredicted RBP7.86□□□□□ -1.15
SSR3-204ENST00000467733 GPAT2Q6NUI2 795 aa7.86□□□□□ -1.15
SSR3-204ENST00000467733 SEPT12Q8IYM1 358 aa7.86□□□□□ -1.15
SSR3-204ENST00000467733 DDRGK1Q96HY6 314 aa7.86□□□□□ -1.15
SSR3-204ENST00000467733 GMCL1Q96IK5 515 aa7.86□□□□□ -1.15
SSR3-204ENST00000467733 ENAMQ9NRM1 1142 aa7.86□□□□□ -1.15
SSR3-204ENST00000467733 SYNJ2O15056 1496 aa7.86□□□□□ -1.15
SSR3-204ENST00000467733 RAD54L2Q9Y4B4 1467 aa7.86□□□□□ -1.15
SSR3-204ENST00000467733 LILRA1O75019 489 aa7.85□□□□□ -1.15
SSR3-204ENST00000467733 AP1G2O75843 785 aa7.85□□□□□ -1.15
SSR3-204ENST00000467733 RAB15P59190 212 aa7.85□□□□□ -1.15
SSR3-204ENST00000467733 ATP1B4Q9UN42 357 aaPredicted RBP7.85□□□□□ -1.15
SSR3-204ENST00000467733 GRIN2BQ13224 1484 aa7.84□□□□□ -1.15
SSR3-204ENST00000467733 ESPNB1AK53 854 aa7.84□□□□□ -1.15
SSR3-204ENST00000467733 ERVH48-1M5A8F1 160 aa7.84□□□□□ -1.15
SSR3-204ENST00000467733 TDRD9Q8NDG6 1382 aaKnown RBP7.84□□□□□ -1.16
SSR3-204ENST00000467733 SOGA1O94964 1423 aa7.83□□□□□ -1.16
SSR3-204ENST00000467733 FGD5Q6ZNL6 1462 aa7.82□□□□□ -1.16
SSR3-204ENST00000467733 CELA2BP08218 269 aaPredicted RBP7.82□□□□□ -1.16
SSR3-204ENST00000467733 USP17L8P0C7I0 530 aa7.82□□□□□ -1.16
SSR3-204ENST00000467733 ADD1P35611 737 aaKnown RBP7.82□□□□□ -1.16
SSR3-204ENST00000467733 RNF144AP50876 292 aaPredicted RBP7.82□□□□□ -1.16
SSR3-204ENST00000467733 FOXR1Q6PIV2 292 aa7.82□□□□□ -1.16
SSR3-204ENST00000467733 LYPD4Q6UWN0 246 aa7.82□□□□□ -1.16
SSR3-204ENST00000467733 KDF1Q8NAX2 398 aaPredicted RBP7.82□□□□□ -1.16
SSR3-204ENST00000467733 PROCA1Q8NCQ7 364 aaPredicted RBP7.82□□□□□ -1.16
SSR3-204ENST00000467733 MBIPQ9NS73 344 aa7.82□□□□□ -1.16
SSR3-204ENST00000467733 PHF20L1A8MW92 1017 aa7.81□□□□□ -1.16
SSR3-204ENST00000467733 GPC1P35052 558 aa7.81□□□□□ -1.16
SSR3-204ENST00000467733 GAS6Q14393 721 aa7.81□□□□□ -1.16
SSR3-204ENST00000467733 FBXO31Q5XUX0 539 aaPredicted RBP7.81□□□□□ -1.16
SSR3-204ENST00000467733 CCDC125Q86Z20 511 aa7.81□□□□□ -1.16
SSR3-204ENST00000467733 CHMP7Q8WUX9 453 aaPredicted RBP7.81□□□□□ -1.16
SSR3-204ENST00000467733 ERCC6L2Q5T890 1561 aa7.8□□□□□ -1.16
SSR3-204ENST00000467733 TRIM22Q8IYM9 498 aa7.8□□□□□ -1.16
SSR3-204ENST00000467733 EPS8L1Q8TE68 723 aa7.8□□□□□ -1.16
SSR3-204ENST00000467733 ZNF837Q96EG3 531 aaPredicted RBP7.8□□□□□ -1.16
SSR3-204ENST00000467733 HMX1Q9NP08 348 aaPredicted RBP7.8□□□□□ -1.16
SSR3-204ENST00000467733 CYLDQ9NQC7 956 aa7.8□□□□□ -1.16
SSR3-204ENST00000467733 CUEDC1Q9NWM3 386 aaPredicted RBP7.8□□□□□ -1.16
SSR3-204ENST00000467733 ABCA5Q8WWZ7 1642 aa7.79□□□□□ -1.16
SSR3-204ENST00000467733 ATP5J2-PTCD1G3V325 749 aa7.79□□□□□ -1.16
SSR3-204ENST00000467733 H7C1W4 665 aa7.79□□□□□ -1.16
SSR3-204ENST00000467733 PRICKLE2Q7Z3G6 844 aa7.79□□□□□ -1.16
SSR3-204ENST00000467733 KDM4CQ9H3R0 1056 aa7.79□□□□□ -1.16
SSR3-204ENST00000467733 SHROOM2Q13796 1616 aa7.78□□□□□ -1.16
SSR3-204ENST00000467733 PODNQ7Z5L7 613 aa7.78□□□□□ -1.16
SSR3-204ENST00000467733 CEP170Q5SW79 1584 aa7.78□□□□□ -1.16
SSR3-204ENST00000467733 CUX1P39880 1505 aa7.78□□□□□ -1.16
SSR3-204ENST00000467733 RHOQP17081 205 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms