RNA–Protein interactions for RNA: ENSMUST00000225319.1

Ssr1-204, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-204ENSMUST00000225319 CrklP47941 303 aa18.23■□□□□ 0.51
Ssr1-204ENSMUST00000225319 Smc5Q8CG46 1101 aaKnown RBP18.23■□□□□ 0.51
Ssr1-204ENSMUST00000225319 Usp16Q99LG0 825 aa18.23■□□□□ 0.51
Ssr1-204ENSMUST00000225319 Polr3glQ8R0C0 218 aa18.23■□□□□ 0.51
Ssr1-204ENSMUST00000225319 Larp1bA0A0A6YXJ7 370 aaKnown RBP18.22■□□□□ 0.51
Ssr1-204ENSMUST00000225319 G3bp1P97855 465 aaKnown RBP18.22■□□□□ 0.51
Ssr1-204ENSMUST00000225319 Pank1Q8K4K6 548 aa18.22■□□□□ 0.51
Ssr1-204ENSMUST00000225319 Nsd3Q6P2L6 1439 aa18.22■□□□□ 0.51
Ssr1-204ENSMUST00000225319 HdgfP51859 237 aaKnown RBP18.21■□□□□ 0.51
Ssr1-204ENSMUST00000225319 Slx1bQ8BX32 270 aa18.21■□□□□ 0.51
Ssr1-204ENSMUST00000225319 KarsQ99MN1 595 aaKnown RBP18.21■□□□□ 0.51
Ssr1-204ENSMUST00000225319 Trim26Q99PN3 545 aa18.21■□□□□ 0.51
Ssr1-204ENSMUST00000225319 Plekhm2Q80TQ5 1018 aa18.2■□□□□ 0.5
Ssr1-204ENSMUST00000225319 Tns2Q8CGB6 1400 aa18.2■□□□□ 0.5
Ssr1-204ENSMUST00000225319 Cdhr2E9Q7P9 1308 aa18.2■□□□□ 0.5
Ssr1-204ENSMUST00000225319 Aox2Q5SGK3 1345 aa18.2■□□□□ 0.5
Ssr1-204ENSMUST00000225319 Klhdc4Q921I2 584 aa18.2■□□□□ 0.5
Ssr1-204ENSMUST00000225319 Snap23O09044 210 aa18.19■□□□□ 0.5
Ssr1-204ENSMUST00000225319 Gimap5Q8BWF2 308 aa18.19■□□□□ 0.5
Ssr1-204ENSMUST00000225319 Chmp5Q9D7S9 219 aa18.19■□□□□ 0.5
Ssr1-204ENSMUST00000225319 Msh6P54276 1358 aaKnown RBP18.18■□□□□ 0.5
Ssr1-204ENSMUST00000225319 B4galnt3Q6L8S8 986 aa18.18■□□□□ 0.5
Ssr1-204ENSMUST00000225319 Foxp4Q9DBY0 795 aaKnown RBP18.18■□□□□ 0.5
Ssr1-204ENSMUST00000225319 Ggnbp2Q5SV77 696 aa18.17■□□□□ 0.5
Ssr1-204ENSMUST00000225319 U2surpQ6NV83 1029 aaKnown RBP18.17■□□□□ 0.5
Ssr1-204ENSMUST00000225319 Gm10471E9Q1C7 252 aa18.16■□□□□ 0.5
Ssr1-204ENSMUST00000225319 Prim1P20664 417 aa18.16■□□□□ 0.5
Ssr1-204ENSMUST00000225319 MarsQ68FL6 902 aaKnown RBP18.16■□□□□ 0.5
Ssr1-204ENSMUST00000225319 RgmbQ7TQ33 436 aa18.16■□□□□ 0.5
Ssr1-204ENSMUST00000225319 Tspyl2Q7TQI8 677 aa18.16■□□□□ 0.5
Ssr1-204ENSMUST00000225319 Dlg5E9Q9R9 1921 aa18.15■□□□□ 0.5
Ssr1-204ENSMUST00000225319 Pard3Q99NH2 1333 aa18.15■□□□□ 0.5
Ssr1-204ENSMUST00000225319 Gm6268A2A3U9 297 aa18.15■□□□□ 0.5
Ssr1-204ENSMUST00000225319 Aldh1l1Q8R0Y6 902 aa18.15■□□□□ 0.5
Ssr1-204ENSMUST00000225319 Txnrd1Q9JMH6 613 aa18.15■□□□□ 0.5
Ssr1-204ENSMUST00000225319 Plekhd1B2RPU2 505 aa18.14■□□□□ 0.49
Ssr1-204ENSMUST00000225319 Chl1P70232 1209 aa18.14■□□□□ 0.49
Ssr1-204ENSMUST00000225319 Q3UPC7 1272 aa18.14■□□□□ 0.49
Ssr1-204ENSMUST00000225319 ThemisQ8BGW0 636 aa18.14■□□□□ 0.49
Ssr1-204ENSMUST00000225319 Ybx3Q9JKB3 361 aaKnown RBP18.13■□□□□ 0.49
Ssr1-204ENSMUST00000225319 Ubr2Q6WKZ8 1755 aa18.13■□□□□ 0.49
Ssr1-204ENSMUST00000225319 Atf5O70191 283 aa18.11■□□□□ 0.49
Ssr1-204ENSMUST00000225319 Nkx1-2P42580 305 aa18.11■□□□□ 0.49
Ssr1-204ENSMUST00000225319 BcorQ8CGN4 1759 aa18.1■□□□□ 0.49
Ssr1-204ENSMUST00000225319 Duxf3A0A0N4SV92 674 aa18.1■□□□□ 0.49
Ssr1-204ENSMUST00000225319 ChgaP26339 463 aaKnown RBP18.1■□□□□ 0.49
Ssr1-204ENSMUST00000225319 Zranb3Q6NZP1 1069 aa18.1■□□□□ 0.49
Ssr1-204ENSMUST00000225319 Dbr1Q923B1 550 aa18.1■□□□□ 0.49
Ssr1-204ENSMUST00000225319 Maco1Q7TQE6 664 aaKnown RBP18.09■□□□□ 0.49
Ssr1-204ENSMUST00000225319 Ppp1r3fQ9JIG4 799 aa18.09■□□□□ 0.49
Ssr1-204ENSMUST00000225319 Tmc1Q8R4P5 757 aa18.09■□□□□ 0.49
Ssr1-204ENSMUST00000225319 Tmco5bQ80X59 307 aa18.08■□□□□ 0.48
Ssr1-204ENSMUST00000225319 4930572O03RikQ8C5Y0 211 aa18.08■□□□□ 0.48
Ssr1-204ENSMUST00000225319 Acsbg1Q99PU5 721 aa18.08■□□□□ 0.48
Ssr1-204ENSMUST00000225319 Phkg2Q9DB30 406 aa18.08■□□□□ 0.48
Ssr1-204ENSMUST00000225319 Ppm1gQ61074 542 aa18.07■□□□□ 0.48
Ssr1-204ENSMUST00000225319 Znf526Q8BI66 675 aa18.07■□□□□ 0.48
Ssr1-204ENSMUST00000225319 Ssfa2Q922B9 1252 aa18.07■□□□□ 0.48
Ssr1-204ENSMUST00000225319 Pdzd9Q9D9M4 266 aa18.07■□□□□ 0.48
Ssr1-204ENSMUST00000225319 Bcl11aQ9QYE3 773 aa18.07■□□□□ 0.48
Ssr1-204ENSMUST00000225319 Nectin2P32507 530 aa18.06■□□□□ 0.48
Ssr1-204ENSMUST00000225319 CanxP35564 591 aaKnown RBP18.06■□□□□ 0.48
Ssr1-204ENSMUST00000225319 Col1a2Q01149 1372 aa18.06■□□□□ 0.48
Ssr1-204ENSMUST00000225319 Nkx2-3P97334 362 aa18.05■□□□□ 0.48
Ssr1-204ENSMUST00000225319 Tom1O88746 492 aa18.05■□□□□ 0.48
Ssr1-204ENSMUST00000225319 Eif4a1P60843 406 aaKnown RBP18.05■□□□□ 0.48
Ssr1-204ENSMUST00000225319 Zpr1Q62384 459 aa18.05■□□□□ 0.48
Ssr1-204ENSMUST00000225319 Cyp2d12Q8BVD2 504 aa18.05■□□□□ 0.48
Ssr1-204ENSMUST00000225319 Lrrc59Q922Q8 307 aaKnown RBP18.05■□□□□ 0.48
Ssr1-204ENSMUST00000225319 Senp3Q9EP97 568 aaKnown RBP18.05■□□□□ 0.48
Ssr1-204ENSMUST00000225319 MvpQ9EQK5 861 aa18.05■□□□□ 0.48
Ssr1-204ENSMUST00000225319 1700019A02RikA0A087WPV9 146 aa18.04■□□□□ 0.48
Ssr1-204ENSMUST00000225319 Ankrd44B2RXR6 993 aa18.04■□□□□ 0.48
Ssr1-204ENSMUST00000225319 Arhgef1Q61210 920 aaKnown RBP18.04■□□□□ 0.48
Ssr1-204ENSMUST00000225319 Smim5Q8BT42 78 aa18.04■□□□□ 0.48
Ssr1-204ENSMUST00000225319 Cc2d1aQ8K1A6 943 aa18.04■□□□□ 0.48
Ssr1-204ENSMUST00000225319 Ccdc9Q8VC31 543 aaKnown RBP18.04■□□□□ 0.48
Ssr1-204ENSMUST00000225319 Chmp4bQ9D8B3 224 aaKnown RBP18.04■□□□□ 0.48
Ssr1-204ENSMUST00000225319 Pibf1E9Q6K3 756 aa18.03■□□□□ 0.48
Ssr1-204ENSMUST00000225319 Pnpla7A2AJ88 1352 aa18.03■□□□□ 0.48
Ssr1-204ENSMUST00000225319 PappaQ8R4K8 1624 aa18.03■□□□□ 0.48
Ssr1-204ENSMUST00000225319 Q3TQI7 289 aaKnown RBP18.02■□□□□ 0.48
Ssr1-204ENSMUST00000225319 Chpf2Q3UU43 768 aa18.02■□□□□ 0.48
Ssr1-204ENSMUST00000225319 Ipo8Q7TMY7 1010 aa18.02■□□□□ 0.48
Ssr1-204ENSMUST00000225319 Dnai1Q8C0M8 701 aa18.02■□□□□ 0.48
Ssr1-204ENSMUST00000225319 Bcl11bQ99PV8 884 aa18.02■□□□□ 0.48
Ssr1-204ENSMUST00000225319 Bcl2l12Q9D3J3 255 aa18.02■□□□□ 0.48
Ssr1-204ENSMUST00000225319 Akap11E9Q777 1895 aa18.02■□□□□ 0.47
Ssr1-204ENSMUST00000225319 Kat6bQ8BRB7 1872 aa18.02■□□□□ 0.47
Ssr1-204ENSMUST00000225319 Cnksr1A2A9K7 700 aa18.01■□□□□ 0.47
Ssr1-204ENSMUST00000225319 Hsp90aa1P07901 733 aaKnown RBP18.01■□□□□ 0.47
Ssr1-204ENSMUST00000225319 Btbd11Q6GQW0 1109 aa18.01■□□□□ 0.47
Ssr1-204ENSMUST00000225319 Eif3bQ8JZQ9 803 aaKnown RBP18.01■□□□□ 0.47
Ssr1-204ENSMUST00000225319 Chmp7Q8R1T1 451 aa18.01■□□□□ 0.47
Ssr1-204ENSMUST00000225319 Znf330Q922H9 316 aa18.01■□□□□ 0.47
Ssr1-204ENSMUST00000225319 Rlbp1Q9Z275 317 aa18.01■□□□□ 0.47
Ssr1-204ENSMUST00000225319 Hs1bp3Q3TC93 395 aa18.01■□□□□ 0.47
Ssr1-204ENSMUST00000225319 Ric3Q8BPM6 367 aa18.01■□□□□ 0.47
Ssr1-204ENSMUST00000225319 Phf23Q8BSN5 401 aa18.01■□□□□ 0.47
Ssr1-204ENSMUST00000225319 Aldh1l2Q8K009 923 aa18.01■□□□□ 0.47
Retrieved 100 of 22,080 RNA–protein pairs in 81.7 ms