RNA–Protein interactions for RNA: ENSMUST00000196908.4

Pdlim5-209, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 1 (best) BASIC

Gene Pdlim5, Length 1,196 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-209ENSMUST00000196908 Tnrc6bQ8BKI2 1810 aaKnown RBP12.24□□□□□ -0.45
Pdlim5-209ENSMUST00000196908 Spon1Q8VCC9 807 aa12.24□□□□□ -0.45
Pdlim5-209ENSMUST00000196908 Ptpn23Q6PB44 1692 aa12.23□□□□□ -0.45
Pdlim5-209ENSMUST00000196908 TonslQ6NZL6 1363 aa12.23□□□□□ -0.45
Pdlim5-209ENSMUST00000196908 Prim1P20664 417 aa12.23□□□□□ -0.45
Pdlim5-209ENSMUST00000196908 Fam117bQ3U3E2 584 aa12.23□□□□□ -0.45
Pdlim5-209ENSMUST00000196908 ErfeQ6PGN1 340 aa12.23□□□□□ -0.45
Pdlim5-209ENSMUST00000196908 Dnajc10Q9DC23 793 aa12.23□□□□□ -0.45
Pdlim5-209ENSMUST00000196908 Cep152A2AUM9 1736 aaKnown RBP12.23□□□□□ -0.45
Pdlim5-209ENSMUST00000196908 Adamts13Q769J6 1426 aa12.22□□□□□ -0.45
Pdlim5-209ENSMUST00000196908 Mst1rQ62190 1378 aa12.22□□□□□ -0.45
Pdlim5-209ENSMUST00000196908 Las1lA2BE28 776 aaKnown RBP12.22□□□□□ -0.45
Pdlim5-209ENSMUST00000196908 Znf579Q80VM4 562 aa12.22□□□□□ -0.45
Pdlim5-209ENSMUST00000196908 UtrnE9Q6R7 3430 aa12.21□□□□□ -0.45
Pdlim5-209ENSMUST00000196908 Tns2Q8CGB6 1400 aa12.21□□□□□ -0.45
Pdlim5-209ENSMUST00000196908 Zswim8Q3UHH1 1832 aaKnown RBP12.21□□□□□ -0.45
Pdlim5-209ENSMUST00000196908 CatipB9EKE5 520 aa12.21□□□□□ -0.45
Pdlim5-209ENSMUST00000196908 Usp40Q8BWR4 1235 aa12.21□□□□□ -0.45
Pdlim5-209ENSMUST00000196908 Sall2Q9QX96 1004 aa12.21□□□□□ -0.45
Pdlim5-209ENSMUST00000196908 Gm21190A0A0G2JGJ6 266 aa12.2□□□□□ -0.46
Pdlim5-209ENSMUST00000196908 Znrd1-asQ8R0E5 213 aa12.2□□□□□ -0.46
Pdlim5-209ENSMUST00000196908 Lce6aD3YV94 81 aa12.19□□□□□ -0.46
Pdlim5-209ENSMUST00000196908 Rgl3Q3UYI5 709 aa12.19□□□□□ -0.46
Pdlim5-209ENSMUST00000196908 Zpr1Q62384 459 aa12.19□□□□□ -0.46
Pdlim5-209ENSMUST00000196908 EdaraddQ8VHX2 208 aa12.19□□□□□ -0.46
Pdlim5-209ENSMUST00000196908 Tulp1Q9Z273 543 aa12.19□□□□□ -0.46
Pdlim5-209ENSMUST00000196908 TnrQ8BYI9 1358 aa12.18□□□□□ -0.46
Pdlim5-209ENSMUST00000196908 Itgb4A2A863 1818 aa12.18□□□□□ -0.46
Pdlim5-209ENSMUST00000196908 Scarf1Q5ND28 820 aa12.18□□□□□ -0.46
Pdlim5-209ENSMUST00000196908 Idi2Q8BFZ6 227 aa12.18□□□□□ -0.46
Pdlim5-209ENSMUST00000196908 Bclaf1Q8K019 919 aaKnown RBP12.18□□□□□ -0.46
Pdlim5-209ENSMUST00000196908 Kcnh5Q920E3 988 aa12.18□□□□□ -0.46
Pdlim5-209ENSMUST00000196908 Gm11563B1AQ90 168 aa12.17□□□□□ -0.46
Pdlim5-209ENSMUST00000196908 Msl1Q6PDM1 616 aa12.17□□□□□ -0.46
Pdlim5-209ENSMUST00000196908 Krtap4-7Q9D732 168 aa12.17□□□□□ -0.46
Pdlim5-209ENSMUST00000196908 Rock1P70335 1354 aa12.17□□□□□ -0.46
Pdlim5-209ENSMUST00000196908 Sos2Q02384 1333 aa12.16□□□□□ -0.46
Pdlim5-209ENSMUST00000196908 NktrP30415 1453 aa12.16□□□□□ -0.46
Pdlim5-209ENSMUST00000196908 Fmnl2A2APV2 1086 aa12.16□□□□□ -0.46
Pdlim5-209ENSMUST00000196908 Hmgb2P30681 210 aaKnown RBP12.16□□□□□ -0.46
Pdlim5-209ENSMUST00000196908 Jdp2P97875 163 aa12.16□□□□□ -0.46
Pdlim5-209ENSMUST00000196908 Shank3Q4ACU6 1730 aa12.16□□□□□ -0.46
Pdlim5-209ENSMUST00000196908 RalgapbQ8BQZ4 1484 aa12.15□□□□□ -0.46
Pdlim5-209ENSMUST00000196908 Gsto1O09131 240 aa12.15□□□□□ -0.46
Pdlim5-209ENSMUST00000196908 Nol11Q8BJW5 723 aaKnown RBP12.15□□□□□ -0.46
Pdlim5-209ENSMUST00000196908 TatQ8QZR1 454 aa12.15□□□□□ -0.46
Pdlim5-209ENSMUST00000196908 Usp47Q8BY87 1376 aa12.15□□□□□ -0.46
Pdlim5-209ENSMUST00000196908 Smg6P61406 1418 aaKnown RBP12.14□□□□□ -0.47
Pdlim5-209ENSMUST00000196908 Cpsf1Q9EPU4 1441 aaKnown RBP12.14□□□□□ -0.47
Pdlim5-209ENSMUST00000196908 FancaQ9JL70 1439 aa12.14□□□□□ -0.47
Pdlim5-209ENSMUST00000196908 WasP70315 520 aa12.14□□□□□ -0.47
Pdlim5-209ENSMUST00000196908 SnrkQ8VDU5 748 aa12.14□□□□□ -0.47
Pdlim5-209ENSMUST00000196908 Upf1Q9EPU0 1124 aaKnown RBP12.14□□□□□ -0.47
Pdlim5-209ENSMUST00000196908 Aebp2Q9Z248 504 aaKnown RBP12.14□□□□□ -0.47
Pdlim5-209ENSMUST00000196908 MeiocA2AG06 965 aa12.13□□□□□ -0.47
Pdlim5-209ENSMUST00000196908 Plekhd1B2RPU2 505 aa12.13□□□□□ -0.47
Pdlim5-209ENSMUST00000196908 Cyp2c69E9PXC3 491 aa12.13□□□□□ -0.47
Pdlim5-209ENSMUST00000196908 CrklP47941 303 aa12.13□□□□□ -0.47
Pdlim5-209ENSMUST00000196908 Cyp2c40P56657 491 aa12.13□□□□□ -0.47
Pdlim5-209ENSMUST00000196908 Dennd6aQ8BH65 605 aa12.13□□□□□ -0.47
Pdlim5-209ENSMUST00000196908 Col23a1Q8K4G2 532 aa12.13□□□□□ -0.47
Pdlim5-209ENSMUST00000196908 Map3k19E9Q3S4 1311 aa12.12□□□□□ -0.47
Pdlim5-209ENSMUST00000196908 Gm16486A0A1D5RMD1 1434 aa12.12□□□□□ -0.47
Pdlim5-209ENSMUST00000196908 Kcnh4A2A5F7 1018 aa12.12□□□□□ -0.47
Pdlim5-209ENSMUST00000196908 Gm11555B1AQ89 175 aa12.12□□□□□ -0.47
Pdlim5-209ENSMUST00000196908 Axin1O35625 863 aa12.12□□□□□ -0.47
Pdlim5-209ENSMUST00000196908 C1qbpO35658 278 aa12.12□□□□□ -0.47
Pdlim5-209ENSMUST00000196908 Akap2O54931 893 aa12.12□□□□□ -0.47
Pdlim5-209ENSMUST00000196908 Stxbp5lQ5DQR4 1185 aa12.12□□□□□ -0.47
Pdlim5-209ENSMUST00000196908 Ppp1r1bQ60829 194 aa12.12□□□□□ -0.47
Pdlim5-209ENSMUST00000196908 OptnQ8K3K8 584 aa12.12□□□□□ -0.47
Pdlim5-209ENSMUST00000196908 Prom2Q3UUY6 835 aa12.11□□□□□ -0.47
Pdlim5-209ENSMUST00000196908 Kiaa0319lQ8K135 1048 aa12.11□□□□□ -0.47
Pdlim5-209ENSMUST00000196908 Cabp4Q8VHC5 271 aa12.11□□□□□ -0.47
Pdlim5-209ENSMUST00000196908 Col26a1Q91VF6 440 aa12.11□□□□□ -0.47
Pdlim5-209ENSMUST00000196908 Camkk2Q8C078 588 aa12.1□□□□□ -0.47
Pdlim5-209ENSMUST00000196908 Nlgn1Q99K10 843 aa12.1□□□□□ -0.47
Pdlim5-209ENSMUST00000196908 Sipa1l1Q8C0T5 1782 aa12.1□□□□□ -0.47
Pdlim5-209ENSMUST00000196908 CenpjQ569L8 1344 aa12.1□□□□□ -0.47
Pdlim5-209ENSMUST00000196908 Elp1Q7TT37 1333 aaKnown RBP12.1□□□□□ -0.47
Pdlim5-209ENSMUST00000196908 ClspnQ80YR7 1315 aa12.1□□□□□ -0.47
Pdlim5-209ENSMUST00000196908 Zranb3Q6NZP1 1069 aa12.09□□□□□ -0.47
Pdlim5-209ENSMUST00000196908 Arfgef2A2A5R2 1792 aa12.09□□□□□ -0.47
Pdlim5-209ENSMUST00000196908 Znf335A2A5K6 1337 aa12.09□□□□□ -0.47
Pdlim5-209ENSMUST00000196908 Igsf1Q7TQA1 1317 aa12.09□□□□□ -0.47
Pdlim5-209ENSMUST00000196908 Gja3Q64448 417 aa12.08□□□□□ -0.48
Pdlim5-209ENSMUST00000196908 FktnQ8R507 461 aa12.08□□□□□ -0.48
Pdlim5-209ENSMUST00000196908 Exosc9Q9JHI7 438 aaKnown RBP12.08□□□□□ -0.48
Pdlim5-209ENSMUST00000196908 Rps6ka4Q9Z2B9 773 aa12.08□□□□□ -0.48
Pdlim5-209ENSMUST00000196908 Gtf2e1Q9D0D5 440 aa12.07□□□□□ -0.48
Pdlim5-209ENSMUST00000196908 FanciQ8K368 1330 aa12.07□□□□□ -0.48
Pdlim5-209ENSMUST00000196908 Slit1Q80TR4 1531 aa12.06□□□□□ -0.48
Pdlim5-209ENSMUST00000196908 Tmf1B9EKI3 1091 aa12.06□□□□□ -0.48
Pdlim5-209ENSMUST00000196908 Wdr66E9Q743 1299 aa12.06□□□□□ -0.48
Pdlim5-209ENSMUST00000196908 NppbP40753 121 aa12.06□□□□□ -0.48
Pdlim5-209ENSMUST00000196908 Cc2d1aQ8K1A6 943 aa12.06□□□□□ -0.48
Pdlim5-209ENSMUST00000196908 Kif16bB1AVY7 1312 aa12.06□□□□□ -0.48
Pdlim5-209ENSMUST00000196908 Casz1Q9CWL2 1761 aa12.05□□□□□ -0.48
Pdlim5-209ENSMUST00000196908 Ccer2J3QPU5 274 aa12.05□□□□□ -0.48
Pdlim5-209ENSMUST00000196908 Mex3cQ05A36 652 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 71.6 ms