RNA–Protein interactions for RNA: ENSMUST00000192557.1

Pcdh20-202, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 3,362 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-202ENSMUST00000192557 Mon2Q80TL7 1715 aa13.54□□□□□ -0.24
Pcdh20-202ENSMUST00000192557 Ppp2r3aB2RXC8 1150 aa13.54□□□□□ -0.24
Pcdh20-202ENSMUST00000192557 Kcnh5Q920E3 988 aa13.54□□□□□ -0.24
Pcdh20-202ENSMUST00000192557 Kif24Q6NWW5 1356 aa13.54□□□□□ -0.24
Pcdh20-202ENSMUST00000192557 Ano8Q6PB70 1060 aa13.54□□□□□ -0.24
Pcdh20-202ENSMUST00000192557 Zfp777B9EKF4 885 aa13.53□□□□□ -0.24
Pcdh20-202ENSMUST00000192557 Ncoa4Q5U4H9 625 aa13.53□□□□□ -0.24
Pcdh20-202ENSMUST00000192557 Ipo8Q7TMY7 1010 aa13.53□□□□□ -0.24
Pcdh20-202ENSMUST00000192557 Acsbg1Q99PU5 721 aa13.53□□□□□ -0.24
Pcdh20-202ENSMUST00000192557 Cyp2d12Q8BVD2 504 aa13.52□□□□□ -0.24
Pcdh20-202ENSMUST00000192557 Mfap1aC0HKD8 439 aaKnown RBP13.52□□□□□ -0.25
Pcdh20-202ENSMUST00000192557 Mfap1bC0HKD9 439 aaKnown RBP13.52□□□□□ -0.25
Pcdh20-202ENSMUST00000192557 Gsdma3Q5Y4Y6 464 aa13.52□□□□□ -0.25
Pcdh20-202ENSMUST00000192557 MarsQ68FL6 902 aaKnown RBP13.52□□□□□ -0.25
Pcdh20-202ENSMUST00000192557 Zranb3Q6NZP1 1069 aa13.52□□□□□ -0.25
Pcdh20-202ENSMUST00000192557 Ccdc155Q80VJ8 648 aa13.52□□□□□ -0.25
Pcdh20-202ENSMUST00000192557 Ccdc146E9Q9F7 977 aa13.51□□□□□ -0.25
Pcdh20-202ENSMUST00000192557 Fkbp4P30416 458 aa13.51□□□□□ -0.25
Pcdh20-202ENSMUST00000192557 Chl1P70232 1209 aa13.51□□□□□ -0.25
Pcdh20-202ENSMUST00000192557 Kcna6Q61923 529 aa13.51□□□□□ -0.25
Pcdh20-202ENSMUST00000192557 Fam50bQ9WTJ8 334 aa13.51□□□□□ -0.25
Pcdh20-202ENSMUST00000192557 Nkx2-3P97334 362 aa13.51□□□□□ -0.25
Pcdh20-202ENSMUST00000192557 SkilQ60665 675 aa13.51□□□□□ -0.25
Pcdh20-202ENSMUST00000192557 Cog6Q8R3I3 657 aa13.51□□□□□ -0.25
Pcdh20-202ENSMUST00000192557 Arhgef1Q61210 920 aaKnown RBP13.51□□□□□ -0.25
Pcdh20-202ENSMUST00000192557 Lmtk3Q5XJV6 1424 aa13.5□□□□□ -0.25
Pcdh20-202ENSMUST00000192557 Kif18aQ91WD7 886 aa13.5□□□□□ -0.25
Pcdh20-202ENSMUST00000192557 Atl3Q91YH5 541 aa13.5□□□□□ -0.25
Pcdh20-202ENSMUST00000192557 Nrxn3Q6P9K9 1571 aa13.5□□□□□ -0.25
Pcdh20-202ENSMUST00000192557 Prkar2bP31324 416 aa13.49□□□□□ -0.25
Pcdh20-202ENSMUST00000192557 Thsd7aQ69ZU6 1645 aa13.49□□□□□ -0.25
Pcdh20-202ENSMUST00000192557 OptnQ8K3K8 584 aa13.49□□□□□ -0.25
Pcdh20-202ENSMUST00000192557 Smarca5Q91ZW3 1051 aaKnown RBP13.49□□□□□ -0.25
Pcdh20-202ENSMUST00000192557 Sart3Q9JLI8 962 aaKnown RBP13.49□□□□□ -0.25
Pcdh20-202ENSMUST00000192557 Cavin2Q63918 418 aaKnown RBP13.48□□□□□ -0.25
Pcdh20-202ENSMUST00000192557 Dnai1Q8C0M8 701 aa13.48□□□□□ -0.25
Pcdh20-202ENSMUST00000192557 Nol11Q8BJW5 723 aaKnown RBP13.48□□□□□ -0.25
Pcdh20-202ENSMUST00000192557 Amotl1Q9D4H4 968 aa13.48□□□□□ -0.25
Pcdh20-202ENSMUST00000192557 Mdc1Q5PSV9 1707 aa13.47□□□□□ -0.25
Pcdh20-202ENSMUST00000192557 Trim27Q62158 513 aa13.47□□□□□ -0.25
Pcdh20-202ENSMUST00000192557 Ppp1r37Q8BKR5 712 aa13.47□□□□□ -0.25
Pcdh20-202ENSMUST00000192557 Txnrd1Q9JMH6 613 aa13.47□□□□□ -0.25
Pcdh20-202ENSMUST00000192557 Btbd11Q6GQW0 1109 aa13.47□□□□□ -0.25
Pcdh20-202ENSMUST00000192557 Nkx1-2P42580 305 aa13.46□□□□□ -0.25
Pcdh20-202ENSMUST00000192557 Rab11fip3Q8CHD8 1047 aa13.46□□□□□ -0.25
Pcdh20-202ENSMUST00000192557 Foxp4Q9DBY0 795 aaKnown RBP13.46□□□□□ -0.25
Pcdh20-202ENSMUST00000192557 TnrQ8BYI9 1358 aa13.46□□□□□ -0.25
Pcdh20-202ENSMUST00000192557 PtprvP70289 1705 aa13.46□□□□□ -0.25
Pcdh20-202ENSMUST00000192557 AampJ3QN89 436 aa13.46□□□□□ -0.26
Pcdh20-202ENSMUST00000192557 CarsQ9ER72 831 aaKnown RBP13.46□□□□□ -0.26
Pcdh20-202ENSMUST00000192557 Zmym3Q9JLM4 1370 aa13.46□□□□□ -0.26
Pcdh20-202ENSMUST00000192557 Scn7aB1AYL1 1681 aa13.45□□□□□ -0.26
Pcdh20-202ENSMUST00000192557 FanclQ9CR14 375 aa13.45□□□□□ -0.26
Pcdh20-202ENSMUST00000192557 CrklP47941 303 aa13.45□□□□□ -0.26
Pcdh20-202ENSMUST00000192557 GorabQ8BRM2 368 aa13.45□□□□□ -0.26
Pcdh20-202ENSMUST00000192557 Nfat5Q9WV30 1534 aa13.44□□□□□ -0.26
Pcdh20-202ENSMUST00000192557 Map7O88735 730 aa13.44□□□□□ -0.26
Pcdh20-202ENSMUST00000192557 Scn4aQ9ER60 1841 aa13.44□□□□□ -0.26
Pcdh20-202ENSMUST00000192557 Exoc6bA6H5Z3 810 aa13.44□□□□□ -0.26
Pcdh20-202ENSMUST00000192557 Fam13aQ8BGI4 693 aa13.44□□□□□ -0.26
Pcdh20-202ENSMUST00000192557 Smim5Q8BT42 78 aa13.44□□□□□ -0.26
Pcdh20-202ENSMUST00000192557 Brd1E9PZ26 1189 aaKnown RBP13.43□□□□□ -0.26
Pcdh20-202ENSMUST00000192557 Map3k13Q1HKZ5 959 aa13.43□□□□□ -0.26
Pcdh20-202ENSMUST00000192557 TkfcQ8VC30 578 aa13.43□□□□□ -0.26
Pcdh20-202ENSMUST00000192557 Chmp4bQ9D8B3 224 aaKnown RBP13.43□□□□□ -0.26
Pcdh20-202ENSMUST00000192557 Kdm6aO70546 1401 aa13.43□□□□□ -0.26
Pcdh20-202ENSMUST00000192557 Ppm1gQ61074 542 aa13.43□□□□□ -0.26
Pcdh20-202ENSMUST00000192557 Phlpp2Q8BXA7 1320 aa13.42□□□□□ -0.26
Pcdh20-202ENSMUST00000192557 Ahnak2E9PYB0 1738 aaKnown RBP13.42□□□□□ -0.26
Pcdh20-202ENSMUST00000192557 Eif4a1P60843 406 aaKnown RBP13.42□□□□□ -0.26
Pcdh20-202ENSMUST00000192557 Eif4g2Q62448 906 aaKnown RBP13.42□□□□□ -0.26
Pcdh20-202ENSMUST00000192557 Rad17Q6NXW6 688 aa13.42□□□□□ -0.26
Pcdh20-202ENSMUST00000192557 Chmp7Q8R1T1 451 aa13.42□□□□□ -0.26
Pcdh20-202ENSMUST00000192557 Col15a1O35206 1367 aa13.42□□□□□ -0.26
Pcdh20-202ENSMUST00000192557 Cyp2d11P24457 504 aa13.41□□□□□ -0.26
Pcdh20-202ENSMUST00000192557 ThemisQ8BGW0 636 aa13.41□□□□□ -0.26
Pcdh20-202ENSMUST00000192557 Atf5O70191 283 aa13.41□□□□□ -0.26
Pcdh20-202ENSMUST00000192557 HnrnpuQ8VEK3 800 aaKnown RBP13.41□□□□□ -0.26
Pcdh20-202ENSMUST00000192557 Disp3A3KFU9 1347 aa13.41□□□□□ -0.26
Pcdh20-202ENSMUST00000192557 Slit2Q9R1B9 1521 aa13.4□□□□□ -0.26
Pcdh20-202ENSMUST00000192557 Pdzd9Q9D9M4 266 aa13.4□□□□□ -0.26
Pcdh20-202ENSMUST00000192557 RgmbQ7TQ33 436 aa13.4□□□□□ -0.26
Pcdh20-202ENSMUST00000192557 Srgap3Q812A2 1099 aa13.4□□□□□ -0.26
Pcdh20-202ENSMUST00000192557 KnstrnQ9D9Z1 312 aaKnown RBP13.4□□□□□ -0.26
Pcdh20-202ENSMUST00000192557 Nek4Q9Z1J2 792 aa13.4□□□□□ -0.26
Pcdh20-202ENSMUST00000192557 Zap70P43404 618 aa13.4□□□□□ -0.26
Pcdh20-202ENSMUST00000192557 CalcaP70160 136 aa13.4□□□□□ -0.26
Pcdh20-202ENSMUST00000192557 Msh6P54276 1358 aaKnown RBP13.4□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Ccdc27Q3V036 639 aa13.39□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Brinp3Q499E0 766 aa13.39□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Speer4bQ9D9F7 267 aa13.39□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Phlpp1Q8CHE4 1687 aa13.39□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Aox2Q5SGK3 1345 aa13.39□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Hs1bp3Q3TC93 395 aa13.39□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Igsf1Q7TQA1 1317 aa13.38□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Cfdp1O88271 295 aaKnown RBP13.38□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Card10P58660 1021 aa13.38□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Cwc27Q3TKY6 469 aa13.38□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Larp1Q6ZQ58 1072 aaKnown RBP13.38□□□□□ -0.27
Pcdh20-202ENSMUST00000192557 Mphosph10Q810V0 681 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 85.5 ms