RNA–Protein interactions for RNA: ENSMUST00000188338.6

Msh4-203, Transcript of MutS protein homolog 4, mousemouse

APPRIS ALT2 TSL 2 BASIC

Gene Msh4, Length 2,802 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4-203ENSMUST00000188338 LifrP42703 1092 aa11.91□□□□□ -0.5
Msh4-203ENSMUST00000188338 Sh3bp1P55194 680 aa11.91□□□□□ -0.5
Msh4-203ENSMUST00000188338 Eif4g2Q62448 906 aaKnown RBP11.91□□□□□ -0.5
Msh4-203ENSMUST00000188338 Paxip1Q6NZQ4 1056 aa11.9□□□□□ -0.5
Msh4-203ENSMUST00000188338 Dnajc5gQ8C632 165 aa11.9□□□□□ -0.5
Msh4-203ENSMUST00000188338 AU015836B2RUM3 263 aa11.9□□□□□ -0.5
Msh4-203ENSMUST00000188338 Rsph3aQ3UFY4 516 aa11.9□□□□□ -0.5
Msh4-203ENSMUST00000188338 Fam13aQ8BGI4 693 aa11.9□□□□□ -0.5
Msh4-203ENSMUST00000188338 Bloc1s4Q8VED2 215 aa11.9□□□□□ -0.5
Msh4-203ENSMUST00000188338 Prkar2bP31324 416 aa11.89□□□□□ -0.51
Msh4-203ENSMUST00000188338 4933402E13RikQ9D4D2 429 aa11.89□□□□□ -0.51
Msh4-203ENSMUST00000188338 Prune1Q8BIW1 454 aa11.88□□□□□ -0.51
Msh4-203ENSMUST00000188338 Q9D2X8 372 aa11.88□□□□□ -0.51
Msh4-203ENSMUST00000188338 Fam83gQ5SWY7 812 aa11.88□□□□□ -0.51
Msh4-203ENSMUST00000188338 TmpoQ61033 693 aaKnown RBP11.88□□□□□ -0.51
Msh4-203ENSMUST00000188338 Cetn4Q8K4K1 168 aa11.88□□□□□ -0.51
Msh4-203ENSMUST00000188338 Nckap5lQ6GQX2 1323 aa11.88□□□□□ -0.51
Msh4-203ENSMUST00000188338 CltcQ68FD5 1675 aaKnown RBP11.88□□□□□ -0.51
Msh4-203ENSMUST00000188338 Bcar3Q9QZK2 820 aa11.87□□□□□ -0.51
Msh4-203ENSMUST00000188338 Adamts7Q68SA9 1657 aa11.87□□□□□ -0.51
Msh4-203ENSMUST00000188338 Wwc1Q5SXA9 1104 aa11.87□□□□□ -0.51
Msh4-203ENSMUST00000188338 Ppip5k2Q6ZQB6 1129 aa11.87□□□□□ -0.51
Msh4-203ENSMUST00000188338 Plcd3Q8K2J0 785 aa11.87□□□□□ -0.51
Msh4-203ENSMUST00000188338 Chd4Q6PDQ2 1915 aaKnown RBP11.86□□□□□ -0.51
Msh4-203ENSMUST00000188338 MarsQ68FL6 902 aaKnown RBP11.86□□□□□ -0.51
Msh4-203ENSMUST00000188338 Pdia3P27773 505 aaKnown RBP11.86□□□□□ -0.51
Msh4-203ENSMUST00000188338 Cabp4Q8VHC5 271 aa11.86□□□□□ -0.51
Msh4-203ENSMUST00000188338 Rab11fip3Q8CHD8 1047 aa11.85□□□□□ -0.51
Msh4-203ENSMUST00000188338 Ppp6r3Q922D4 844 aa11.85□□□□□ -0.51
Msh4-203ENSMUST00000188338 Atg4a-psA0A0G2JFS9 396 aa11.85□□□□□ -0.51
Msh4-203ENSMUST00000188338 Atg4aQ8C9S8 396 aa11.85□□□□□ -0.51
Msh4-203ENSMUST00000188338 Tshz3Q8CGV9 1081 aa11.85□□□□□ -0.51
Msh4-203ENSMUST00000188338 Gdpd2Q9ESM6 539 aa11.85□□□□□ -0.51
Msh4-203ENSMUST00000188338 Kif20bQ80WE4 1774 aaKnown RBP11.85□□□□□ -0.51
Msh4-203ENSMUST00000188338 Rasa1E9PYG6 1038 aa11.84□□□□□ -0.51
Msh4-203ENSMUST00000188338 EngaseQ8BX80 734 aa11.84□□□□□ -0.51
Msh4-203ENSMUST00000188338 Itsn1Q9Z0R4 1714 aa11.84□□□□□ -0.51
Msh4-203ENSMUST00000188338 Casq1O09165 405 aa11.84□□□□□ -0.51
Msh4-203ENSMUST00000188338 HnrnpuQ8VEK3 800 aaKnown RBP11.84□□□□□ -0.51
Msh4-203ENSMUST00000188338 Nwd1A6H603 1563 aa11.83□□□□□ -0.52
Msh4-203ENSMUST00000188338 Gm21190A0A0G2JGJ6 266 aa11.83□□□□□ -0.52
Msh4-203ENSMUST00000188338 Sv2bQ8BG39 683 aa11.83□□□□□ -0.52
Msh4-203ENSMUST00000188338 Rtf1A2AQ19 715 aaKnown RBP11.83□□□□□ -0.52
Msh4-203ENSMUST00000188338 Bag4Q8CI61 457 aa11.83□□□□□ -0.52
Msh4-203ENSMUST00000188338 Hmox1P14901 289 aa11.82□□□□□ -0.52
Msh4-203ENSMUST00000188338 Q3TQI7 289 aaKnown RBP11.82□□□□□ -0.52
Msh4-203ENSMUST00000188338 Nol12Q8BG17 217 aa11.82□□□□□ -0.52
Msh4-203ENSMUST00000188338 CenppQ9CZ92 286 aa11.82□□□□□ -0.52
Msh4-203ENSMUST00000188338 Phactr2B1AVP0 632 aa11.82□□□□□ -0.52
Msh4-203ENSMUST00000188338 Ccne1Q61457 408 aa11.82□□□□□ -0.52
Msh4-203ENSMUST00000188338 Fam43aQ8BUP8 424 aa11.82□□□□□ -0.52
Msh4-203ENSMUST00000188338 Cyp46a1Q9WVK8 500 aa11.82□□□□□ -0.52
Msh4-203ENSMUST00000188338 NpatQ8BMA5 1420 aa11.82□□□□□ -0.52
Msh4-203ENSMUST00000188338 Chl1P70232 1209 aa11.82□□□□□ -0.52
Msh4-203ENSMUST00000188338 Nucb1Q02819 459 aaKnown RBP11.82□□□□□ -0.52
Msh4-203ENSMUST00000188338 Cpa2Q504N0 417 aa11.82□□□□□ -0.52
Msh4-203ENSMUST00000188338 Srgap3Q812A2 1099 aa11.82□□□□□ -0.52
Msh4-203ENSMUST00000188338 Trim44Q9QXA7 346 aa11.82□□□□□ -0.52
Msh4-203ENSMUST00000188338 Usp32F8VPZ3 1604 aa11.81□□□□□ -0.52
Msh4-203ENSMUST00000188338 Tmem132eQ6IEE6 982 aa11.81□□□□□ -0.52
Msh4-203ENSMUST00000188338 Phf14Q9D4H9 881 aa11.81□□□□□ -0.52
Msh4-203ENSMUST00000188338 Adamtsl3G3UXC7 1706 aa11.81□□□□□ -0.52
Msh4-203ENSMUST00000188338 Hsp90b1P08113 802 aaKnown RBP11.81□□□□□ -0.52
Msh4-203ENSMUST00000188338 Plekhg1F6S200 1446 aa11.8□□□□□ -0.52
Msh4-203ENSMUST00000188338 Synj2Q9D2G5 1434 aa11.8□□□□□ -0.52
Msh4-203ENSMUST00000188338 Cgnl1Q6AW69 1298 aa11.8□□□□□ -0.52
Msh4-203ENSMUST00000188338 Erich6bQ9D4S6 220 aa11.8□□□□□ -0.52
Msh4-203ENSMUST00000188338 Mdc1Q5PSV9 1707 aa11.8□□□□□ -0.52
Msh4-203ENSMUST00000188338 Parp14Q2EMV9 1817 aa11.8□□□□□ -0.52
Msh4-203ENSMUST00000188338 PtmaP26350 111 aa11.8□□□□□ -0.52
Msh4-203ENSMUST00000188338 Eya1P97767 591 aa11.8□□□□□ -0.52
Msh4-203ENSMUST00000188338 Q3UJC8 639 aa11.8□□□□□ -0.52
Msh4-203ENSMUST00000188338 Aldh8a1Q8BH00 487 aa11.8□□□□□ -0.52
Msh4-203ENSMUST00000188338 Pdcl3Q8BVF2 240 aa11.8□□□□□ -0.52
Msh4-203ENSMUST00000188338 MyclP10166 368 aa11.79□□□□□ -0.52
Msh4-203ENSMUST00000188338 Tm6sf1P58749 370 aa11.79□□□□□ -0.52
Msh4-203ENSMUST00000188338 Safb2Q80YR5 991 aaKnown RBP11.79□□□□□ -0.52
Msh4-203ENSMUST00000188338 1700010I14RikQ7TPG0 532 aa11.79□□□□□ -0.52
Msh4-203ENSMUST00000188338 Kdm4cQ8VCD7 1054 aa11.79□□□□□ -0.52
Msh4-203ENSMUST00000188338 Gcc1Q9D4H2 778 aa11.79□□□□□ -0.52
Msh4-203ENSMUST00000188338 Sos1Q62245 1319 aa11.79□□□□□ -0.52
Msh4-203ENSMUST00000188338 4930407I10RikD3Z5T8 1512 aa11.78□□□□□ -0.52
Msh4-203ENSMUST00000188338 Gadd45bP22339 160 aa11.78□□□□□ -0.52
Msh4-203ENSMUST00000188338 Sparcl1P70663 650 aa11.78□□□□□ -0.52
Msh4-203ENSMUST00000188338 Cwc27Q3TKY6 469 aa11.78□□□□□ -0.52
Msh4-203ENSMUST00000188338 Ppp1r42Q8R1Z4 357 aa11.78□□□□□ -0.52
Msh4-203ENSMUST00000188338 Spef2Q8C9J3 1734 aa11.78□□□□□ -0.52
Msh4-203ENSMUST00000188338 Znf541Q0GGX2 1363 aa11.78□□□□□ -0.52
Msh4-203ENSMUST00000188338 Idi1P58044 227 aa11.78□□□□□ -0.52
Msh4-203ENSMUST00000188338 Cyp27a1Q9DBG1 533 aa11.78□□□□□ -0.52
Msh4-203ENSMUST00000188338 PplQ9R269 1755 aa11.78□□□□□ -0.52
Msh4-203ENSMUST00000188338 Bcl2l13P59017 434 aa11.78□□□□□ -0.52
Msh4-203ENSMUST00000188338 Rbm27Q5SFM8 1060 aaKnown RBP11.78□□□□□ -0.52
Msh4-203ENSMUST00000188338 PogkQ80TC5 607 aa11.78□□□□□ -0.52
Msh4-203ENSMUST00000188338 Rnf214Q8BFU3 668 aaKnown RBP11.78□□□□□ -0.52
Msh4-203ENSMUST00000188338 FancaQ9JL70 1439 aa11.77□□□□□ -0.53
Msh4-203ENSMUST00000188338 Zkscan16A2ALW2 728 aa11.77□□□□□ -0.53
Msh4-203ENSMUST00000188338 Cavin2Q63918 418 aaKnown RBP11.77□□□□□ -0.53
Msh4-203ENSMUST00000188338 Dennd6aQ8BH65 605 aa11.77□□□□□ -0.53
Msh4-203ENSMUST00000188338 Tmx3Q8BXZ1 456 aa11.77□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 28.9 ms