RNA–Protein interactions for RNA: ENSMUST00000179869.2

Hmgcs1-201, Transcript of Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgcs1, Length 3,245 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1-201ENSMUST00000179869 Eif4g2Q62448 906 aaKnown RBP11.18□□□□□ -0.62
Hmgcs1-201ENSMUST00000179869 Fam13aQ8BGI4 693 aa11.18□□□□□ -0.62
Hmgcs1-201ENSMUST00000179869 Hmox1P14901 289 aa11.17□□□□□ -0.62
Hmgcs1-201ENSMUST00000179869 Srgap3Q812A2 1099 aa11.17□□□□□ -0.62
Hmgcs1-201ENSMUST00000179869 Acsbg1Q99PU5 721 aa11.17□□□□□ -0.62
Hmgcs1-201ENSMUST00000179869 Itsn1Q9Z0R4 1714 aa11.17□□□□□ -0.62
Hmgcs1-201ENSMUST00000179869 PaskQ8CEE6 1383 aa11.17□□□□□ -0.62
Hmgcs1-201ENSMUST00000179869 Phlpp2Q8BXA7 1320 aa11.17□□□□□ -0.62
Hmgcs1-201ENSMUST00000179869 Hsp90b1P08113 802 aaKnown RBP11.17□□□□□ -0.62
Hmgcs1-201ENSMUST00000179869 Paxip1Q6NZQ4 1056 aa11.17□□□□□ -0.62
Hmgcs1-201ENSMUST00000179869 Trim44Q9QXA7 346 aa11.17□□□□□ -0.62
Hmgcs1-201ENSMUST00000179869 Wdr63B2RY71 923 aa11.16□□□□□ -0.62
Hmgcs1-201ENSMUST00000179869 Stk3Q9JI10 497 aa11.16□□□□□ -0.62
Hmgcs1-201ENSMUST00000179869 PzpQ61838 1495 aa11.16□□□□□ -0.62
Hmgcs1-201ENSMUST00000179869 Nkx2-3P97334 362 aa11.16□□□□□ -0.62
Hmgcs1-201ENSMUST00000179869 Nol12Q8BG17 217 aa11.16□□□□□ -0.62
Hmgcs1-201ENSMUST00000179869 Ciz1Q8VEH2 845 aa11.16□□□□□ -0.62
Hmgcs1-201ENSMUST00000179869 Kif2cQ922S8 721 aa11.16□□□□□ -0.62
Hmgcs1-201ENSMUST00000179869 Adamts7Q68SA9 1657 aa11.16□□□□□ -0.62
Hmgcs1-201ENSMUST00000179869 Eif2ak4Q9QZ05 1648 aa11.15□□□□□ -0.62
Hmgcs1-201ENSMUST00000179869 Tmc1Q8R4P5 757 aa11.15□□□□□ -0.62
Hmgcs1-201ENSMUST00000179869 Cfdp1O88271 295 aaKnown RBP11.15□□□□□ -0.62
Hmgcs1-201ENSMUST00000179869 Zap70P43404 618 aa11.15□□□□□ -0.62
Hmgcs1-201ENSMUST00000179869 Pknox2Q8BG99 474 aa11.14□□□□□ -0.63
Hmgcs1-201ENSMUST00000179869 HypkQ9CR41 129 aa11.14□□□□□ -0.63
Hmgcs1-201ENSMUST00000179869 Antxr1Q9CZ52 562 aa11.14□□□□□ -0.63
Hmgcs1-201ENSMUST00000179869 Plekhg1F6S200 1446 aa11.14□□□□□ -0.63
Hmgcs1-201ENSMUST00000179869 Dip2bQ3UH60 1574 aa11.14□□□□□ -0.63
Hmgcs1-201ENSMUST00000179869 Pdlim2Q8R1G6 349 aa11.14□□□□□ -0.63
Hmgcs1-201ENSMUST00000179869 Ppp1r42Q8R1Z4 357 aa11.14□□□□□ -0.63
Hmgcs1-201ENSMUST00000179869 Zranb3Q6NZP1 1069 aa11.13□□□□□ -0.63
Hmgcs1-201ENSMUST00000179869 Mphosph10Q810V0 681 aaKnown RBP11.13□□□□□ -0.63
Hmgcs1-201ENSMUST00000179869 GphnQ8BUV3 769 aaKnown RBP11.13□□□□□ -0.63
Hmgcs1-201ENSMUST00000179869 Rab11fip3Q8CHD8 1047 aa11.13□□□□□ -0.63
Hmgcs1-201ENSMUST00000179869 Phactr2B1AVP0 632 aa11.13□□□□□ -0.63
Hmgcs1-201ENSMUST00000179869 Tlr7P58681 1050 aa11.13□□□□□ -0.63
Hmgcs1-201ENSMUST00000179869 Clcn1Q64347 994 aa11.13□□□□□ -0.63
Hmgcs1-201ENSMUST00000179869 PtpruB1AUH1 1446 aa11.12□□□□□ -0.63
Hmgcs1-201ENSMUST00000179869 Pdcl3Q8BVF2 240 aa11.12□□□□□ -0.63
Hmgcs1-201ENSMUST00000179869 Erich6bQ9D4S6 220 aa11.12□□□□□ -0.63
Hmgcs1-201ENSMUST00000179869 Chd4Q6PDQ2 1915 aaKnown RBP11.12□□□□□ -0.63
Hmgcs1-201ENSMUST00000179869 Pik3c2bE9QAN8 1632 aa11.12□□□□□ -0.63
Hmgcs1-201ENSMUST00000179869 PtmaP26350 111 aa11.12□□□□□ -0.63
Hmgcs1-201ENSMUST00000179869 Dzip1Q8BMD2 852 aa11.12□□□□□ -0.63
Hmgcs1-201ENSMUST00000179869 Edc3Q8K2D3 508 aaKnown RBP11.12□□□□□ -0.63
Hmgcs1-201ENSMUST00000179869 Kcnn1Q9EQR3 537 aa11.12□□□□□ -0.63
Hmgcs1-201ENSMUST00000179869 Adamtsl3G3UXC7 1706 aa11.12□□□□□ -0.63
Hmgcs1-201ENSMUST00000179869 Pa2g4P50580 394 aaKnown RBP11.11□□□□□ -0.63
Hmgcs1-201ENSMUST00000179869 Rsph3aQ3UFY4 516 aa11.11□□□□□ -0.63
Hmgcs1-201ENSMUST00000179869 Slc39a6Q8C145 765 aa11.11□□□□□ -0.63
Hmgcs1-201ENSMUST00000179869 Ift172Q6VH22 1749 aa11.11□□□□□ -0.63
Hmgcs1-201ENSMUST00000179869 Atg4a-psA0A0G2JFS9 396 aa11.11□□□□□ -0.63
Hmgcs1-201ENSMUST00000179869 Atg4aQ8C9S8 396 aa11.11□□□□□ -0.63
Hmgcs1-201ENSMUST00000179869 Cyp46a1Q9WVK8 500 aa11.11□□□□□ -0.63
Hmgcs1-201ENSMUST00000179869 Parp14Q2EMV9 1817 aa11.11□□□□□ -0.63
Hmgcs1-201ENSMUST00000179869 Gm21698A0A087WQP8 267 aa11.11□□□□□ -0.63
Hmgcs1-201ENSMUST00000179869 Brpf1B2RRD7 1212 aa11.11□□□□□ -0.63
Hmgcs1-201ENSMUST00000179869 Gm21671G3UY31 267 aa11.11□□□□□ -0.63
Hmgcs1-201ENSMUST00000179869 Chl1P70232 1209 aa11.11□□□□□ -0.63
Hmgcs1-201ENSMUST00000179869 Btbd11Q6GQW0 1109 aa11.11□□□□□ -0.63
Hmgcs1-201ENSMUST00000179869 Slain2Q8CI08 581 aa11.11□□□□□ -0.63
Hmgcs1-201ENSMUST00000179869 Uhrf1bp1B2KF50 1429 aa11.1□□□□□ -0.63
Hmgcs1-201ENSMUST00000179869 Nwd1A6H603 1563 aa11.1□□□□□ -0.63
Hmgcs1-201ENSMUST00000179869 F2rP30558 430 aa11.1□□□□□ -0.63
Hmgcs1-201ENSMUST00000179869 MarsQ68FL6 902 aaKnown RBP11.1□□□□□ -0.63
Hmgcs1-201ENSMUST00000179869 HnrnpuQ8VEK3 800 aaKnown RBP11.1□□□□□ -0.63
Hmgcs1-201ENSMUST00000179869 Zmym3Q9JLM4 1370 aa11.1□□□□□ -0.63
Hmgcs1-201ENSMUST00000179869 4930407I10RikD3Z5T8 1512 aa11.1□□□□□ -0.63
Hmgcs1-201ENSMUST00000179869 Astn2Q80Z10 1352 aa11.09□□□□□ -0.63
Hmgcs1-201ENSMUST00000179869 Cyp2d11P24457 504 aa11.09□□□□□ -0.63
Hmgcs1-201ENSMUST00000179869 Gemin5Q8BX17 1502 aaKnown RBP11.09□□□□□ -0.63
Hmgcs1-201ENSMUST00000179869 Gnai2P08752 355 aaKnown RBP11.09□□□□□ -0.63
Hmgcs1-201ENSMUST00000179869 Cpa2Q504N0 417 aa11.08□□□□□ -0.64
Hmgcs1-201ENSMUST00000179869 Dixdc1Q80Y83 711 aa11.08□□□□□ -0.64
Hmgcs1-201ENSMUST00000179869 Nphp1Q9QY53 687 aa11.08□□□□□ -0.64
Hmgcs1-201ENSMUST00000179869 Dip2aQ8BWT5 1523 aa11.07□□□□□ -0.64
Hmgcs1-201ENSMUST00000179869 Ythdc1E9Q5K9 736 aaKnown RBP11.07□□□□□ -0.64
Hmgcs1-201ENSMUST00000179869 Pdia3P27773 505 aaKnown RBP11.07□□□□□ -0.64
Hmgcs1-201ENSMUST00000179869 Atp7bQ64446 1462 aa11.06□□□□□ -0.64
Hmgcs1-201ENSMUST00000179869 Hoxb7P09024 217 aa11.06□□□□□ -0.64
Hmgcs1-201ENSMUST00000179869 LifrP42703 1092 aa11.06□□□□□ -0.64
Hmgcs1-201ENSMUST00000179869 Ppip5k2Q6ZQB6 1129 aa11.06□□□□□ -0.64
Hmgcs1-201ENSMUST00000179869 Smim5Q8BT42 78 aa11.06□□□□□ -0.64
Hmgcs1-201ENSMUST00000179869 Phf14Q9D4H9 881 aa11.06□□□□□ -0.64
Hmgcs1-201ENSMUST00000179869 Ets1P27577 440 aa11.06□□□□□ -0.64
Hmgcs1-201ENSMUST00000179869 Igfbp6P47880 238 aa11.06□□□□□ -0.64
Hmgcs1-201ENSMUST00000179869 Cnnm1Q0GA42 951 aa11.06□□□□□ -0.64
Hmgcs1-201ENSMUST00000179869 Babam1Q3UI43 333 aa11.06□□□□□ -0.64
Hmgcs1-201ENSMUST00000179869 Ptpdc1Q6NZK8 747 aa11.06□□□□□ -0.64
Hmgcs1-201ENSMUST00000179869 Sytl4Q9R0Q1 673 aa11.06□□□□□ -0.64
Hmgcs1-201ENSMUST00000179869 Casq1O09165 405 aa11.05□□□□□ -0.64
Hmgcs1-201ENSMUST00000179869 Ppfia3P60469 1194 aa11.05□□□□□ -0.64
Hmgcs1-201ENSMUST00000179869 Jakmip1Q8BVL9 626 aa11.05□□□□□ -0.64
Hmgcs1-201ENSMUST00000179869 PigbQ9JJQ0 542 aa11.05□□□□□ -0.64
Hmgcs1-201ENSMUST00000179869 Fam84aQ9D650 292 aa11.05□□□□□ -0.64
Hmgcs1-201ENSMUST00000179869 Txnrd1Q9JMH6 613 aa11.05□□□□□ -0.64
Hmgcs1-201ENSMUST00000179869 Sos1Q62245 1319 aa11.05□□□□□ -0.64
Hmgcs1-201ENSMUST00000179869 Golgb1E9PVZ8 3238 aa11.05□□□□□ -0.64
Hmgcs1-201ENSMUST00000179869 Tpx2A2APB8 745 aaKnown RBP11.05□□□□□ -0.64
Hmgcs1-201ENSMUST00000179869 Fmnl2A2APV2 1086 aa11.05□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 26.9 ms