RNA–Protein interactions for RNA: ENSMUST00000108419.8

Vps53-203, Transcript of Vacuolar protein sorting-associated protein 53 homolog, mousemouse

TSL 1 (best) BASIC

Gene Vps53, Length 2,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53-203ENSMUST00000108419 Col15a1O35206 1367 aa21.93■■□□□ 1.1
Vps53-203ENSMUST00000108419 Gsdma3Q5Y4Y6 464 aa21.93■■□□□ 1.1
Vps53-203ENSMUST00000108419 U2surpQ6NV83 1029 aaKnown RBP21.93■■□□□ 1.1
Vps53-203ENSMUST00000108419 Smim5Q8BT42 78 aa21.93■■□□□ 1.1
Vps53-203ENSMUST00000108419 Pdlim2Q8R1G6 349 aa21.93■■□□□ 1.1
Vps53-203ENSMUST00000108419 Bcl9lQ67FY2 1494 aa21.93■■□□□ 1.1
Vps53-203ENSMUST00000108419 Ipo4Q8VI75 1082 aa21.92■■□□□ 1.1
Vps53-203ENSMUST00000108419 Arfgef2A2A5R2 1792 aa21.92■■□□□ 1.1
Vps53-203ENSMUST00000108419 Rab11fip3Q8CHD8 1047 aa21.92■■□□□ 1.1
Vps53-203ENSMUST00000108419 Usp16Q99LG0 825 aa21.92■■□□□ 1.1
Vps53-203ENSMUST00000108419 Trpm3Q5F4S9 1721 aa21.91■■□□□ 1.1
Vps53-203ENSMUST00000108419 Rtf1A2AQ19 715 aaKnown RBP21.91■■□□□ 1.1
Vps53-203ENSMUST00000108419 CrklP47941 303 aa21.91■■□□□ 1.1
Vps53-203ENSMUST00000108419 Ppm1gQ61074 542 aa21.91■■□□□ 1.1
Vps53-203ENSMUST00000108419 Ccdc60Q8C4J0 545 aa21.91■■□□□ 1.1
Vps53-203ENSMUST00000108419 Prim1P20664 417 aa21.9■■□□□ 1.1
Vps53-203ENSMUST00000108419 Ggnbp2Q5SV77 696 aa21.9■■□□□ 1.1
Vps53-203ENSMUST00000108419 Rangap1P46061 589 aaKnown RBP21.9■■□□□ 1.1
Vps53-203ENSMUST00000108419 Pank1Q8K4K6 548 aa21.9■■□□□ 1.1
Vps53-203ENSMUST00000108419 TkfcQ8VC30 578 aa21.89■■□□□ 1.09
Vps53-203ENSMUST00000108419 Chmp5Q9D7S9 219 aa21.89■■□□□ 1.09
Vps53-203ENSMUST00000108419 Gm6268A2A3U9 297 aa21.88■■□□□ 1.09
Vps53-203ENSMUST00000108419 Gm10471E9Q1C7 252 aa21.88■■□□□ 1.09
Vps53-203ENSMUST00000108419 Vamp4O70480 141 aa21.88■■□□□ 1.09
Vps53-203ENSMUST00000108419 Smc5Q8CG46 1101 aaKnown RBP21.88■■□□□ 1.09
Vps53-203ENSMUST00000108419 Amotl1Q9D4H4 968 aa21.87■■□□□ 1.09
Vps53-203ENSMUST00000108419 RgmbQ7TQ33 436 aa21.87■■□□□ 1.09
Vps53-203ENSMUST00000108419 Cdhr2E9Q7P9 1308 aa21.86■■□□□ 1.09
Vps53-203ENSMUST00000108419 Dbr1Q923B1 550 aa21.86■■□□□ 1.09
Vps53-203ENSMUST00000108419 1700019A02RikA0A087WPV9 146 aa21.85■■□□□ 1.09
Vps53-203ENSMUST00000108419 Pibf1E9Q6K3 756 aa21.85■■□□□ 1.09
Vps53-203ENSMUST00000108419 Ccdc171E9Q1U1 1324 aa21.85■■□□□ 1.09
Vps53-203ENSMUST00000108419 ZgpatQ8VDM1 511 aa21.84■■□□□ 1.09
Vps53-203ENSMUST00000108419 Simc1E9Q6E9 1354 aa21.84■■□□□ 1.09
Vps53-203ENSMUST00000108419 HdgfP51859 237 aaKnown RBP21.84■■□□□ 1.09
Vps53-203ENSMUST00000108419 G3bp1P97855 465 aaKnown RBP21.84■■□□□ 1.09
Vps53-203ENSMUST00000108419 Trim58Q5NCC9 485 aa21.84■■□□□ 1.09
Vps53-203ENSMUST00000108419 Zranb3Q6NZP1 1069 aa21.84■■□□□ 1.09
Vps53-203ENSMUST00000108419 Tspyl2Q7TQI8 677 aa21.83■■□□□ 1.09
Vps53-203ENSMUST00000108419 Ppp1r3fQ9JIG4 799 aa21.83■■□□□ 1.08
Vps53-203ENSMUST00000108419 Nup153E9Q3G8 1462 aaKnown RBP21.82■■□□□ 1.08
Vps53-203ENSMUST00000108419 Sos1Q62245 1319 aa21.82■■□□□ 1.08
Vps53-203ENSMUST00000108419 Nectin2P32507 530 aa21.82■■□□□ 1.08
Vps53-203ENSMUST00000108419 Plekhm2Q80TQ5 1018 aa21.82■■□□□ 1.08
Vps53-203ENSMUST00000108419 ThemisQ8BGW0 636 aa21.81■■□□□ 1.08
Vps53-203ENSMUST00000108419 Tmc1Q8R4P5 757 aa21.81■■□□□ 1.08
Vps53-203ENSMUST00000108419 Hspa1lP16627 641 aa21.8■■□□□ 1.08
Vps53-203ENSMUST00000108419 Znf526Q8BI66 675 aa21.8■■□□□ 1.08
Vps53-203ENSMUST00000108419 Zfp142G5E869 1843 aa21.8■■□□□ 1.08
Vps53-203ENSMUST00000108419 Nkx2-3P97334 362 aa21.8■■□□□ 1.08
Vps53-203ENSMUST00000108419 Tmco5bQ80X59 307 aa21.8■■□□□ 1.08
Vps53-203ENSMUST00000108419 Ybx3Q9JKB3 361 aaKnown RBP21.8■■□□□ 1.08
Vps53-203ENSMUST00000108419 KarsQ99MN1 595 aaKnown RBP21.79■■□□□ 1.08
Vps53-203ENSMUST00000108419 Slit1Q80TR4 1531 aa21.79■■□□□ 1.08
Vps53-203ENSMUST00000108419 FocadA2AKG8 1798 aa21.79■■□□□ 1.08
Vps53-203ENSMUST00000108419 Qtrt2B8ZXI1 415 aa21.79■■□□□ 1.08
Vps53-203ENSMUST00000108419 Aox2Q5SGK3 1345 aa21.78■■□□□ 1.08
Vps53-203ENSMUST00000108419 Tom1O88746 492 aa21.78■■□□□ 1.08
Vps53-203ENSMUST00000108419 Ddx54Q8K4L0 874 aaKnown RBP21.78■■□□□ 1.08
Vps53-203ENSMUST00000108419 Marf1Q8BJ34 1730 aaKnown RBP21.77■■□□□ 1.08
Vps53-203ENSMUST00000108419 Slx1bQ8BX32 270 aa21.77■■□□□ 1.08
Vps53-203ENSMUST00000108419 Bcl2l12Q9D3J3 255 aa21.77■■□□□ 1.08
Vps53-203ENSMUST00000108419 Fam50bQ9WTJ8 334 aa21.77■■□□□ 1.08
Vps53-203ENSMUST00000108419 Znf330Q922H9 316 aa21.76■■□□□ 1.07
Vps53-203ENSMUST00000108419 Foxp4Q9DBY0 795 aaKnown RBP21.76■■□□□ 1.07
Vps53-203ENSMUST00000108419 Nsd3Q6P2L6 1439 aa21.75■■□□□ 1.07
Vps53-203ENSMUST00000108419 Znf521Q6KAS7 1311 aa21.74■■□□□ 1.07
Vps53-203ENSMUST00000108419 Ipo8Q7TMY7 1010 aa21.74■■□□□ 1.07
Vps53-203ENSMUST00000108419 Adgrb1Q3UHD1 1582 aa21.74■■□□□ 1.07
Vps53-203ENSMUST00000108419 Q3UPC7 1272 aa21.72■■□□□ 1.07
Vps53-203ENSMUST00000108419 Nutm1Q8BHP2 1126 aa21.72■■□□□ 1.07
Vps53-203ENSMUST00000108419 Arhgef1Q61210 920 aaKnown RBP21.72■■□□□ 1.07
Vps53-203ENSMUST00000108419 Zpr1Q62384 459 aa21.72■■□□□ 1.07
Vps53-203ENSMUST00000108419 Eif2s2Q99L45 331 aaKnown RBP21.72■■□□□ 1.07
Vps53-203ENSMUST00000108419 Ak7Q9D2H2 614 aa21.72■■□□□ 1.07
Vps53-203ENSMUST00000108419 Pdzd9Q9D9M4 266 aa21.72■■□□□ 1.07
Vps53-203ENSMUST00000108419 Plekhd1B2RPU2 505 aa21.71■■□□□ 1.07
Vps53-203ENSMUST00000108419 Ppp1r9bQ6R891 817 aaKnown RBP21.71■■□□□ 1.07
Vps53-203ENSMUST00000108419 Pard3Q99NH2 1333 aa21.71■■□□□ 1.07
Vps53-203ENSMUST00000108419 Cyp2d12Q8BVD2 504 aa21.71■■□□□ 1.07
Vps53-203ENSMUST00000108419 Cc2d1aQ8K1A6 943 aa21.71■■□□□ 1.07
Vps53-203ENSMUST00000108419 Abcc12Q80WJ6 1366 aa21.7■■□□□ 1.06
Vps53-203ENSMUST00000108419 Chl1P70232 1209 aa21.7■■□□□ 1.06
Vps53-203ENSMUST00000108419 Maco1Q7TQE6 664 aaKnown RBP21.7■■□□□ 1.06
Vps53-203ENSMUST00000108419 Tnks1bp1P58871 1720 aa21.69■■□□□ 1.06
Vps53-203ENSMUST00000108419 Aplp1Q03157 653 aa21.69■■□□□ 1.06
Vps53-203ENSMUST00000108419 Kcnn1Q9EQR3 537 aa21.69■■□□□ 1.06
Vps53-203ENSMUST00000108419 Irx6Q9ER75 438 aa21.69■■□□□ 1.06
Vps53-203ENSMUST00000108419 Igsf1Q7TQA1 1317 aa21.69■■□□□ 1.06
Vps53-203ENSMUST00000108419 Myo5bP21271 1818 aa21.69■■□□□ 1.06
Vps53-203ENSMUST00000108419 Q3TQI7 289 aaKnown RBP21.68■■□□□ 1.06
Vps53-203ENSMUST00000108419 Cavin2Q63918 418 aaKnown RBP21.68■■□□□ 1.06
Vps53-203ENSMUST00000108419 Phkg2Q9DB30 406 aa21.68■■□□□ 1.06
Vps53-203ENSMUST00000108419 Duxf3A0A0N4SV92 674 aa21.68■■□□□ 1.06
Vps53-203ENSMUST00000108419 Aldh1l1Q8R0Y6 902 aa21.68■■□□□ 1.06
Vps53-203ENSMUST00000108419 Lrrc59Q922Q8 307 aaKnown RBP21.68■■□□□ 1.06
Vps53-203ENSMUST00000108419 MarsQ68FL6 902 aaKnown RBP21.67■■□□□ 1.06
Vps53-203ENSMUST00000108419 Btbd11Q6GQW0 1109 aa21.67■■□□□ 1.06
Vps53-203ENSMUST00000108419 Ccdc155Q80VJ8 648 aa21.67■■□□□ 1.06
Vps53-203ENSMUST00000108419 4930572O03RikQ8C5Y0 211 aa21.67■■□□□ 1.06
Retrieved 100 of 22,080 RNA–protein pairs in 26.5 ms