RNA–Protein interactions for RNA: ENSMUST00000086483.3

Ccdc60-202, Transcript of Coiled-coil domain-containing protein 60, mousemouse

TSL 1 (best) BASIC

Gene Ccdc60, Length 2,168 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60-202ENSMUST00000086483 Zdbf2Q5SS00 2493 aaKnown RBP15.27■□□□□ 0.04
Ccdc60-202ENSMUST00000086483 Spon1Q8VCC9 807 aa15.27■□□□□ 0.04
Ccdc60-202ENSMUST00000086483 Kiaa1107Q80TK0 1369 aa15.27■□□□□ 0.03
Ccdc60-202ENSMUST00000086483 4930572O03RikQ8C5Y0 211 aa15.26■□□□□ 0.03
Ccdc60-202ENSMUST00000086483 Fam50bQ9WTJ8 334 aa15.26■□□□□ 0.03
Ccdc60-202ENSMUST00000086483 Casz1Q9CWL2 1761 aa15.26■□□□□ 0.03
Ccdc60-202ENSMUST00000086483 Simc1E9Q6E9 1354 aa15.26■□□□□ 0.03
Ccdc60-202ENSMUST00000086483 Chrna2Q91X60 512 aa15.26■□□□□ 0.03
Ccdc60-202ENSMUST00000086483 Speer4bQ9D9F7 267 aa15.25■□□□□ 0.03
Ccdc60-202ENSMUST00000086483 Spata31d1bE9QA57 1361 aa15.25■□□□□ 0.03
Ccdc60-202ENSMUST00000086483 Socs7Q8VHQ2 579 aa15.25■□□□□ 0.03
Ccdc60-202ENSMUST00000086483 PappaQ8R4K8 1624 aa15.24■□□□□ 0.03
Ccdc60-202ENSMUST00000086483 Sned1Q70E20 1403 aa15.24■□□□□ 0.03
Ccdc60-202ENSMUST00000086483 CoblQ5NBX1 1337 aaKnown RBP15.24■□□□□ 0.03
Ccdc60-202ENSMUST00000086483 Hoxb7P09024 217 aa15.24■□□□□ 0.03
Ccdc60-202ENSMUST00000086483 Tmf1B9EKI3 1091 aa15.24■□□□□ 0.03
Ccdc60-202ENSMUST00000086483 Prom2Q3UUY6 835 aa15.24■□□□□ 0.03
Ccdc60-202ENSMUST00000086483 ApobrQ8VBT6 942 aa15.22■□□□□ 0.03
Ccdc60-202ENSMUST00000086483 Tgfb2P27090 414 aa15.22■□□□□ 0.03
Ccdc60-202ENSMUST00000086483 Kdm6aO70546 1401 aa15.22■□□□□ 0.03
Ccdc60-202ENSMUST00000086483 Msl1Q6PDM1 616 aa15.21■□□□□ 0.02
Ccdc60-202ENSMUST00000086483 Ccne1Q61457 408 aa15.19■□□□□ 0.02
Ccdc60-202ENSMUST00000086483 Plch1Q4KWH5 1682 aa15.19■□□□□ 0.02
Ccdc60-202ENSMUST00000086483 ThemisQ8BGW0 636 aa15.19■□□□□ 0.02
Ccdc60-202ENSMUST00000086483 Camkk2Q8C078 588 aa15.19■□□□□ 0.02
Ccdc60-202ENSMUST00000086483 Aplp2Q06335 707 aa15.17■□□□□ 0.02
Ccdc60-202ENSMUST00000086483 Pcgf6Q99NA9 353 aa15.17■□□□□ 0.02
Ccdc60-202ENSMUST00000086483 Birc3O08863 600 aa15.17■□□□□ 0.02
Ccdc60-202ENSMUST00000086483 Zfyve9A2A8R0 1397 aa15.16■□□□□ 0.02
Ccdc60-202ENSMUST00000086483 ScaperF8VQ70 1398 aaKnown RBP15.16■□□□□ 0.02
Ccdc60-202ENSMUST00000086483 Itgb4A2A863 1818 aa15.16■□□□□ 0.02
Ccdc60-202ENSMUST00000086483 Trpm3Q5F4S9 1721 aa15.16■□□□□ 0.02
Ccdc60-202ENSMUST00000086483 Bicdl1A0JNT9 577 aa15.15■□□□□ 0.02
Ccdc60-202ENSMUST00000086483 Ccnl1Q52KE7 532 aaKnown RBP15.15■□□□□ 0.02
Ccdc60-202ENSMUST00000086483 Ppp1r37Q8BKR5 712 aa15.15■□□□□ 0.02
Ccdc60-202ENSMUST00000086483 FktnQ8R507 461 aa15.15■□□□□ 0.02
Ccdc60-202ENSMUST00000086483 Sumf1Q8R0F3 372 aa15.15■□□□□ 0.02
Ccdc60-202ENSMUST00000086483 Msh6P54276 1358 aaKnown RBP15.14■□□□□ 0.01
Ccdc60-202ENSMUST00000086483 Eif3bQ8JZQ9 803 aaKnown RBP15.14■□□□□ 0.01
Ccdc60-202ENSMUST00000086483 Megf6Q80V70 1572 aa15.14■□□□□ 0.01
Ccdc60-202ENSMUST00000086483 Cyp2c69E9PXC3 491 aa15.14■□□□□ 0.01
Ccdc60-202ENSMUST00000086483 Cyp2c40P56657 491 aa15.14■□□□□ 0.01
Ccdc60-202ENSMUST00000086483 IbtkQ6ZPR6 1352 aaKnown RBP15.13■□□□□ 0.01
Ccdc60-202ENSMUST00000086483 Cfap70D3YVL2 1141 aa15.13■□□□□ 0.01
Ccdc60-202ENSMUST00000086483 Larp1Q6ZQ58 1072 aaKnown RBP15.13■□□□□ 0.01
Ccdc60-202ENSMUST00000086483 Ubr3Q5U430 1889 aa15.12■□□□□ 0.01
Ccdc60-202ENSMUST00000086483 Myt1Q8CFC2 1127 aa15.12■□□□□ 0.01
Ccdc60-202ENSMUST00000086483 Crb1Q8VHS2 1405 aa15.12■□□□□ 0.01
Ccdc60-202ENSMUST00000086483 Gtpbp6Q3U6U5 514 aa15.11■□□□□ 0.01
Ccdc60-202ENSMUST00000086483 Hdac6Q9Z2V5 1149 aa15.11■□□□□ 0.01
Ccdc60-202ENSMUST00000086483 Taf1dQ9D4V4 322 aa15.1■□□□□ 0.01
Ccdc60-202ENSMUST00000086483 ArsiQ32KI9 573 aa15.09■□□□□ 0.01
Ccdc60-202ENSMUST00000086483 Ric1Q69ZJ7 1422 aa15.08■□□□□ 0.01
Ccdc60-202ENSMUST00000086483 Tns2Q8CGB6 1400 aa15.08■□□□□ 0.01
Ccdc60-202ENSMUST00000086483 Gm21663A0A0G2JE01 267 aa15.08■□□□□ 0.01
Ccdc60-202ENSMUST00000086483 Gm13023A2A8N2 498 aa15.08■□□□□ 0.01
Ccdc60-202ENSMUST00000086483 Gm7361D3Z6R1 267 aa15.08■□□□□ 0.01
Ccdc60-202ENSMUST00000086483 5031410I06RikE9Q4E0 267 aa15.08■□□□□ 0.01
Ccdc60-202ENSMUST00000086483 Gm1979E9QAN3 267 aa15.08■□□□□ 0.01
Ccdc60-202ENSMUST00000086483 Gm5862K7N5V5 267 aa15.08■□□□□ 0.01
Ccdc60-202ENSMUST00000086483 Gm10220K7N660 267 aa15.08■□□□□ 0.01
Ccdc60-202ENSMUST00000086483 Smarcc1P97496 1104 aa15.08■□□□□ 0.01
Ccdc60-202ENSMUST00000086483 NogP97466 232 aa15.08■□□□□ 0
Ccdc60-202ENSMUST00000086483 Tjp1P39447 1745 aaKnown RBP15.07■□□□□ 0
Ccdc60-202ENSMUST00000086483 Cyp2c67Q569X9 491 aa15.07■□□□□ 0
Ccdc60-202ENSMUST00000086483 Mier1Q5UAK0 511 aa15.07■□□□□ 0
Ccdc60-202ENSMUST00000086483 Jmjd4Q8BFT6 427 aa15.07■□□□□ 0
Ccdc60-202ENSMUST00000086483 Slc5a1Q8C3K6 665 aa15.07■□□□□ 0
Ccdc60-202ENSMUST00000086483 Pde3aQ9Z0X4 1141 aa15.07■□□□□ 0
Ccdc60-202ENSMUST00000086483 Col11a2Q64739 1736 aa15.07■□□□□ 0
Ccdc60-202ENSMUST00000086483 Klhdc4Q921I2 584 aa15.07■□□□□ 0
Ccdc60-202ENSMUST00000086483 Parp14Q2EMV9 1817 aa15.06■□□□□ 0
Ccdc60-202ENSMUST00000086483 Stxbp5lQ5DQR4 1185 aa15.06■□□□□ 0
Ccdc60-202ENSMUST00000086483 Upf1Q9EPU0 1124 aaKnown RBP15.06■□□□□ 0
Ccdc60-202ENSMUST00000086483 TrhQ62361 256 aa15.04■□□□□ -0
Ccdc60-202ENSMUST00000086483 Akap2O54931 893 aa15.04■□□□□ -0
Ccdc60-202ENSMUST00000086483 RtcbQ99LF4 505 aaKnown RBP15.04■□□□□ -0
Ccdc60-202ENSMUST00000086483 C4bP01029 1738 aa15.03■□□□□ -0
Ccdc60-202ENSMUST00000086483 Slc4a1apE9PX68 744 aa15.02■□□□□ -0
Ccdc60-202ENSMUST00000086483 Cyp2c68K7N6C2 491 aa15.02■□□□□ -0
Ccdc60-202ENSMUST00000086483 Eya1P97767 591 aa15.02■□□□□ -0
Ccdc60-202ENSMUST00000086483 Ssfa2Q922B9 1252 aa15.02■□□□□ -0
Ccdc60-202ENSMUST00000086483 Atg3Q9CPX6 314 aa15.01□□□□□ -0.01
Ccdc60-202ENSMUST00000086483 PnisrA2AJT4 805 aaKnown RBP15.01□□□□□ -0.01
Ccdc60-202ENSMUST00000086483 VwdeQ6DFV8 926 aa15□□□□□ -0.01
Ccdc60-202ENSMUST00000086483 Podxl2Q8CAE9 603 aa15□□□□□ -0.01
Ccdc60-202ENSMUST00000086483 Phkg2Q9DB30 406 aa15□□□□□ -0.01
Ccdc60-202ENSMUST00000086483 Mex3cQ05A36 652 aaKnown RBP15□□□□□ -0.01
Ccdc60-202ENSMUST00000086483 Nedd4P46935 887 aaKnown RBP14.99□□□□□ -0.01
Ccdc60-202ENSMUST00000086483 Rbm46P86049 533 aa14.99□□□□□ -0.01
Ccdc60-202ENSMUST00000086483 Asic4Q7TNS7 539 aa14.99□□□□□ -0.01
Ccdc60-202ENSMUST00000086483 CpzQ8R4V4 654 aa14.99□□□□□ -0.01
Ccdc60-202ENSMUST00000086483 Togaram1Q6A070 1776 aaKnown RBP14.98□□□□□ -0.01
Ccdc60-202ENSMUST00000086483 Dcaf5Q80T85 946 aa14.98□□□□□ -0.01
Ccdc60-202ENSMUST00000086483 Ints5Q8CHT3 1018 aa14.98□□□□□ -0.01
Ccdc60-202ENSMUST00000086483 Aebp2Q9Z248 504 aaKnown RBP14.98□□□□□ -0.01
Ccdc60-202ENSMUST00000086483 Sos1Q62245 1319 aa14.98□□□□□ -0.01
Ccdc60-202ENSMUST00000086483 Zfp777B9EKF4 885 aa14.97□□□□□ -0.01
Ccdc60-202ENSMUST00000086483 Wdhd1P59328 1117 aa14.97□□□□□ -0.01
Ccdc60-202ENSMUST00000086483 Lrrc43Q3V0L5 667 aa14.97□□□□□ -0.01
Retrieved 100 of 22,080 RNA–protein pairs in 24.1 ms