RNA–Protein interactions for RNA: ENSMUST00000069187.11

Trim23-203, Transcript of E3 ubiquitin-protein ligase TRIM23, mousemouse

TSL 1 (best) BASIC

Gene Trim23, Length 3,546 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23-203ENSMUST00000069187 Kdm4cQ8VCD7 1054 aa14.12□□□□□ -0.15
Trim23-203ENSMUST00000069187 N4bp2F8VQG7 1678 aaKnown RBP14.12□□□□□ -0.15
Trim23-203ENSMUST00000069187 Ush1cQ9ES64 910 aa14.11□□□□□ -0.15
Trim23-203ENSMUST00000069187 FancaQ9JL70 1439 aa14.11□□□□□ -0.15
Trim23-203ENSMUST00000069187 Mcm10Q0VBD2 885 aa14.11□□□□□ -0.15
Trim23-203ENSMUST00000069187 Ccne1Q61457 408 aa14.11□□□□□ -0.15
Trim23-203ENSMUST00000069187 Kif18aQ91WD7 886 aa14.11□□□□□ -0.15
Trim23-203ENSMUST00000069187 Rangap1P46061 589 aaKnown RBP14.11□□□□□ -0.15
Trim23-203ENSMUST00000069187 Ddx17Q501J6 650 aaKnown RBP14.11□□□□□ -0.15
Trim23-203ENSMUST00000069187 Dixdc1Q80Y83 711 aa14.11□□□□□ -0.15
Trim23-203ENSMUST00000069187 Cabp2Q9JLK4 216 aa14.11□□□□□ -0.15
Trim23-203ENSMUST00000069187 Fez1Q8K0X8 392 aa14.1□□□□□ -0.15
Trim23-203ENSMUST00000069187 NalcnQ8BXR5 1738 aa14.1□□□□□ -0.15
Trim23-203ENSMUST00000069187 Kif1aP33173 1695 aa14.1□□□□□ -0.15
Trim23-203ENSMUST00000069187 Als2Q920R0 1651 aa14.1□□□□□ -0.15
Trim23-203ENSMUST00000069187 Dzip1Q8BMD2 852 aa14.1□□□□□ -0.15
Trim23-203ENSMUST00000069187 Thsd7aQ69ZU6 1645 aa14.1□□□□□ -0.15
Trim23-203ENSMUST00000069187 Tmem132eQ6IEE6 982 aa14.1□□□□□ -0.15
Trim23-203ENSMUST00000069187 SkilQ60665 675 aa14.09□□□□□ -0.15
Trim23-203ENSMUST00000069187 Ripk4Q9ERK0 786 aa14.09□□□□□ -0.15
Trim23-203ENSMUST00000069187 Rtf1A2AQ19 715 aaKnown RBP14.08□□□□□ -0.15
Trim23-203ENSMUST00000069187 Cluap1Q8R3P7 413 aa14.08□□□□□ -0.15
Trim23-203ENSMUST00000069187 Bcl11bQ99PV8 884 aa14.08□□□□□ -0.16
Trim23-203ENSMUST00000069187 Nsfl1cQ9CZ44 370 aaKnown RBP14.08□□□□□ -0.16
Trim23-203ENSMUST00000069187 Pdia4P08003 638 aaKnown RBP14.08□□□□□ -0.16
Trim23-203ENSMUST00000069187 HdgfP51859 237 aaKnown RBP14.08□□□□□ -0.16
Trim23-203ENSMUST00000069187 Ncoa4Q5U4H9 625 aa14.08□□□□□ -0.16
Trim23-203ENSMUST00000069187 DekQ7TNV0 380 aaKnown RBP14.08□□□□□ -0.16
Trim23-203ENSMUST00000069187 Gm21698A0A087WQP8 267 aa14.07□□□□□ -0.16
Trim23-203ENSMUST00000069187 Lekr1B2RVN1 116 aa14.07□□□□□ -0.16
Trim23-203ENSMUST00000069187 Gm21671G3UY31 267 aa14.07□□□□□ -0.16
Trim23-203ENSMUST00000069187 Hoxc9P09633 260 aa14.07□□□□□ -0.16
Trim23-203ENSMUST00000069187 Tmx3Q8BXZ1 456 aa14.07□□□□□ -0.16
Trim23-203ENSMUST00000069187 Mon2Q80TL7 1715 aa14.07□□□□□ -0.16
Trim23-203ENSMUST00000069187 U2surpQ6NV83 1029 aaKnown RBP14.07□□□□□ -0.16
Trim23-203ENSMUST00000069187 Dnajc10Q9DC23 793 aa14.07□□□□□ -0.16
Trim23-203ENSMUST00000069187 Senp3Q9EP97 568 aaKnown RBP14.07□□□□□ -0.16
Trim23-203ENSMUST00000069187 Brd1E9PZ26 1189 aaKnown RBP14.06□□□□□ -0.16
Trim23-203ENSMUST00000069187 Becn1O88597 448 aa14.06□□□□□ -0.16
Trim23-203ENSMUST00000069187 Rfx1P48377 963 aa14.06□□□□□ -0.16
Trim23-203ENSMUST00000069187 Unc13bQ9Z1N9 1602 aa14.06□□□□□ -0.16
Trim23-203ENSMUST00000069187 Scaf1Q5U4C3 1256 aaKnown RBP14.06□□□□□ -0.16
Trim23-203ENSMUST00000069187 AU019823E9PUQ3 292 aa14.06□□□□□ -0.16
Trim23-203ENSMUST00000069187 Wwc1Q5SXA9 1104 aa14.05□□□□□ -0.16
Trim23-203ENSMUST00000069187 PaskQ8CEE6 1383 aa14.05□□□□□ -0.16
Trim23-203ENSMUST00000069187 Brinp3Q499E0 766 aa14.05□□□□□ -0.16
Trim23-203ENSMUST00000069187 Rab11fip3Q8CHD8 1047 aa14.05□□□□□ -0.16
Trim23-203ENSMUST00000069187 Cog6Q8R3I3 657 aa14.05□□□□□ -0.16
Trim23-203ENSMUST00000069187 Rad17Q6NXW6 688 aa14.04□□□□□ -0.16
Trim23-203ENSMUST00000069187 Chd4Q6PDQ2 1915 aaKnown RBP14.04□□□□□ -0.16
Trim23-203ENSMUST00000069187 Cetn4Q8K4K1 168 aa14.04□□□□□ -0.16
Trim23-203ENSMUST00000069187 Rbm10Q99KG3 930 aaKnown RBP14.04□□□□□ -0.16
Trim23-203ENSMUST00000069187 Sipa1l2Q80TE4 1722 aa14.04□□□□□ -0.16
Trim23-203ENSMUST00000069187 1700019A02RikA0A087WPV9 146 aa14.04□□□□□ -0.16
Trim23-203ENSMUST00000069187 Eya1P97767 591 aa14.04□□□□□ -0.16
Trim23-203ENSMUST00000069187 TmpoQ61033 693 aaKnown RBP14.04□□□□□ -0.16
Trim23-203ENSMUST00000069187 ImpactO55091 318 aa14.03□□□□□ -0.16
Trim23-203ENSMUST00000069187 Irf5P56477 497 aa14.03□□□□□ -0.16
Trim23-203ENSMUST00000069187 Gsdma3Q5Y4Y6 464 aa14.03□□□□□ -0.16
Trim23-203ENSMUST00000069187 Ano8Q6PB70 1060 aa14.03□□□□□ -0.16
Trim23-203ENSMUST00000069187 HypkQ9CR41 129 aa14.03□□□□□ -0.16
Trim23-203ENSMUST00000069187 Erbb4Q61527 1308 aa14.03□□□□□ -0.16
Trim23-203ENSMUST00000069187 Col16a1Q8BLX7 1580 aa14.03□□□□□ -0.16
Trim23-203ENSMUST00000069187 Casq1O09165 405 aa14.03□□□□□ -0.16
Trim23-203ENSMUST00000069187 1700010I14RikQ7TPG0 532 aa14.03□□□□□ -0.16
Trim23-203ENSMUST00000069187 Larp1bA0A0A6YXJ7 370 aaKnown RBP14.02□□□□□ -0.16
Trim23-203ENSMUST00000069187 Gnai1B2RSH2 354 aa14.02□□□□□ -0.16
Trim23-203ENSMUST00000069187 Q4VA45 678 aa14.02□□□□□ -0.16
Trim23-203ENSMUST00000069187 Erich6bQ9D4S6 220 aa14.02□□□□□ -0.16
Trim23-203ENSMUST00000069187 Gnai3Q9DC51 354 aa14.02□□□□□ -0.16
Trim23-203ENSMUST00000069187 Bag4Q8CI61 457 aa14.02□□□□□ -0.17
Trim23-203ENSMUST00000069187 Ltbp4Q8K4G1 1666 aa14.02□□□□□ -0.17
Trim23-203ENSMUST00000069187 Gimap5Q8BWF2 308 aa14.02□□□□□ -0.17
Trim23-203ENSMUST00000069187 Nol11Q8BJW5 723 aaKnown RBP14.01□□□□□ -0.17
Trim23-203ENSMUST00000069187 Pik3c2aQ61194 1686 aa14.01□□□□□ -0.17
Trim23-203ENSMUST00000069187 Ccdc171E9Q1U1 1324 aa14.01□□□□□ -0.17
Trim23-203ENSMUST00000069187 Amigo3Q8C2S7 508 aa14.01□□□□□ -0.17
Trim23-203ENSMUST00000069187 Mknk2Q8CDB0 459 aa14.01□□□□□ -0.17
Trim23-203ENSMUST00000069187 PtmsQ9D0J8 101 aaKnown RBP14.01□□□□□ -0.17
Trim23-203ENSMUST00000069187 Kif24Q6NWW5 1356 aa14□□□□□ -0.17
Trim23-203ENSMUST00000069187 Gm10471E9Q1C7 252 aa14□□□□□ -0.17
Trim23-203ENSMUST00000069187 Ccdc60Q8C4J0 545 aa14□□□□□ -0.17
Trim23-203ENSMUST00000069187 Chmp4bQ9D8B3 224 aaKnown RBP13.99□□□□□ -0.17
Trim23-203ENSMUST00000069187 PtmaP26350 111 aa13.99□□□□□ -0.17
Trim23-203ENSMUST00000069187 TkfcQ8VC30 578 aa13.99□□□□□ -0.17
Trim23-203ENSMUST00000069187 Acsbg1Q99PU5 721 aa13.99□□□□□ -0.17
Trim23-203ENSMUST00000069187 Cdc37l1Q9CZP7 335 aa13.99□□□□□ -0.17
Trim23-203ENSMUST00000069187 Usp16Q99LG0 825 aa13.99□□□□□ -0.17
Trim23-203ENSMUST00000069187 Ppp1r3fQ9JIG4 799 aa13.99□□□□□ -0.17
Trim23-203ENSMUST00000069187 Pibf1E9Q6K3 756 aa13.98□□□□□ -0.17
Trim23-203ENSMUST00000069187 CastP51125 788 aa13.98□□□□□ -0.17
Trim23-203ENSMUST00000069187 Maco1Q7TQE6 664 aaKnown RBP13.98□□□□□ -0.17
Trim23-203ENSMUST00000069187 Amotl2Q8K371 772 aa13.98□□□□□ -0.17
Trim23-203ENSMUST00000069187 LifrP42703 1092 aa13.98□□□□□ -0.17
Trim23-203ENSMUST00000069187 Irx6Q9ER75 438 aa13.98□□□□□ -0.17
Trim23-203ENSMUST00000069187 Znf541Q0GGX2 1363 aa13.98□□□□□ -0.17
Trim23-203ENSMUST00000069187 Wdr63B2RY71 923 aa13.98□□□□□ -0.17
Trim23-203ENSMUST00000069187 ZgpatQ8VDM1 511 aa13.97□□□□□ -0.17
Trim23-203ENSMUST00000069187 Bloc1s4Q8VED2 215 aa13.97□□□□□ -0.17
Trim23-203ENSMUST00000069187 Tmco5bQ80X59 307 aa13.97□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 36.7 ms