RNA–Protein interactions for RNA: ENSMUST00000057254.5

Ubqln3-201, Transcript of Ubiquilin-3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubqln3, Length 2,376 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln3-201ENSMUST00000057254 Ppp2r3aB2RXC8 1150 aa11.2□□□□□ -0.62
Ubqln3-201ENSMUST00000057254 ArxO35085 564 aa11.2□□□□□ -0.62
Ubqln3-201ENSMUST00000057254 Dzip1Q8BMD2 852 aa11.2□□□□□ -0.62
Ubqln3-201ENSMUST00000057254 Cyp2d12Q8BVD2 504 aa11.2□□□□□ -0.62
Ubqln3-201ENSMUST00000057254 Ncoa4Q5U4H9 625 aa11.19□□□□□ -0.62
Ubqln3-201ENSMUST00000057254 Fam83gQ5SWY7 812 aa11.19□□□□□ -0.62
Ubqln3-201ENSMUST00000057254 Farp2Q91VS8 1065 aa11.19□□□□□ -0.62
Ubqln3-201ENSMUST00000057254 Eif2s2Q99L45 331 aaKnown RBP11.19□□□□□ -0.62
Ubqln3-201ENSMUST00000057254 HypkQ9CR41 129 aa11.19□□□□□ -0.62
Ubqln3-201ENSMUST00000057254 Wnk3Q80XP9 1757 aa11.18□□□□□ -0.62
Ubqln3-201ENSMUST00000057254 CanxP35564 591 aaKnown RBP11.18□□□□□ -0.62
Ubqln3-201ENSMUST00000057254 Msh6P54276 1358 aaKnown RBP11.18□□□□□ -0.62
Ubqln3-201ENSMUST00000057254 AampJ3QN89 436 aa11.17□□□□□ -0.62
Ubqln3-201ENSMUST00000057254 Dlg5E9Q9R9 1921 aa11.17□□□□□ -0.62
Ubqln3-201ENSMUST00000057254 Ltbp4Q8K4G1 1666 aa11.17□□□□□ -0.62
Ubqln3-201ENSMUST00000057254 Triml2E9PW10 424 aa11.17□□□□□ -0.62
Ubqln3-201ENSMUST00000057254 Rtl5Q5DTT4 599 aa11.17□□□□□ -0.62
Ubqln3-201ENSMUST00000057254 Cavin2Q63918 418 aaKnown RBP11.17□□□□□ -0.62
Ubqln3-201ENSMUST00000057254 Ipo8Q7TMY7 1010 aa11.17□□□□□ -0.62
Ubqln3-201ENSMUST00000057254 Gimap6Q8K349 305 aa11.17□□□□□ -0.62
Ubqln3-201ENSMUST00000057254 Rapgef3Q8VCC8 918 aa11.17□□□□□ -0.62
Ubqln3-201ENSMUST00000057254 Dixdc1Q80Y83 711 aa11.16□□□□□ -0.62
Ubqln3-201ENSMUST00000057254 Atl3Q91YH5 541 aa11.16□□□□□ -0.62
Ubqln3-201ENSMUST00000057254 Myo5bP21271 1818 aa11.16□□□□□ -0.62
Ubqln3-201ENSMUST00000057254 Brwd3A2AHJ4 1799 aa11.16□□□□□ -0.62
Ubqln3-201ENSMUST00000057254 Fmnl2A2APV2 1086 aa11.16□□□□□ -0.62
Ubqln3-201ENSMUST00000057254 Hsp90ab1P11499 724 aaKnown RBP11.16□□□□□ -0.62
Ubqln3-201ENSMUST00000057254 Chpf2Q3UU43 768 aa11.16□□□□□ -0.62
Ubqln3-201ENSMUST00000057254 Gli3Q61602 1583 aa11.15□□□□□ -0.62
Ubqln3-201ENSMUST00000057254 TnrQ8BYI9 1358 aa11.15□□□□□ -0.62
Ubqln3-201ENSMUST00000057254 Q3TQI7 289 aaKnown RBP11.15□□□□□ -0.62
Ubqln3-201ENSMUST00000057254 SkilQ60665 675 aa11.15□□□□□ -0.62
Ubqln3-201ENSMUST00000057254 Arhgef1Q61210 920 aaKnown RBP11.15□□□□□ -0.62
Ubqln3-201ENSMUST00000057254 Kcna6Q61923 529 aa11.15□□□□□ -0.62
Ubqln3-201ENSMUST00000057254 Sv2bQ8BG39 683 aa11.15□□□□□ -0.62
Ubqln3-201ENSMUST00000057254 Ppp1r37Q8BKR5 712 aa11.15□□□□□ -0.62
Ubqln3-201ENSMUST00000057254 Kcnh5Q920E3 988 aa11.15□□□□□ -0.62
Ubqln3-201ENSMUST00000057254 Foxp4Q9DBY0 795 aaKnown RBP11.15□□□□□ -0.62
Ubqln3-201ENSMUST00000057254 Atf3Q60765 181 aa11.14□□□□□ -0.63
Ubqln3-201ENSMUST00000057254 Trim27Q62158 513 aa11.14□□□□□ -0.63
Ubqln3-201ENSMUST00000057254 Cc2d1aQ8K1A6 943 aa11.14□□□□□ -0.63
Ubqln3-201ENSMUST00000057254 Cog6Q8R3I3 657 aa11.14□□□□□ -0.63
Ubqln3-201ENSMUST00000057254 Kif18aQ91WD7 886 aa11.14□□□□□ -0.63
Ubqln3-201ENSMUST00000057254 Kdm6aO70546 1401 aa11.14□□□□□ -0.63
Ubqln3-201ENSMUST00000057254 Nup153E9Q3G8 1462 aaKnown RBP11.14□□□□□ -0.63
Ubqln3-201ENSMUST00000057254 Sart3Q9JLI8 962 aaKnown RBP11.13□□□□□ -0.63
Ubqln3-201ENSMUST00000057254 Phlpp2Q8BXA7 1320 aa11.13□□□□□ -0.63
Ubqln3-201ENSMUST00000057254 Brd1E9PZ26 1189 aaKnown RBP11.13□□□□□ -0.63
Ubqln3-201ENSMUST00000057254 Gm10471E9Q1C7 252 aa11.13□□□□□ -0.63
Ubqln3-201ENSMUST00000057254 Rad17Q6NXW6 688 aa11.13□□□□□ -0.63
Ubqln3-201ENSMUST00000057254 Col15a1O35206 1367 aa11.13□□□□□ -0.63
Ubqln3-201ENSMUST00000057254 Cyp2d11P24457 504 aa11.12□□□□□ -0.63
Ubqln3-201ENSMUST00000057254 Prkar2bP31324 416 aa11.12□□□□□ -0.63
Ubqln3-201ENSMUST00000057254 Gsdma3Q5Y4Y6 464 aa11.12□□□□□ -0.63
Ubqln3-201ENSMUST00000057254 Phf23Q8BSN5 401 aa11.12□□□□□ -0.63
Ubqln3-201ENSMUST00000057254 Amotl1Q9D4H4 968 aa11.12□□□□□ -0.63
Ubqln3-201ENSMUST00000057254 Nid2O88322 1403 aa11.12□□□□□ -0.63
Ubqln3-201ENSMUST00000057254 Gm21698A0A087WQP8 267 aa11.12□□□□□ -0.63
Ubqln3-201ENSMUST00000057254 Mfap1aC0HKD8 439 aaKnown RBP11.12□□□□□ -0.63
Ubqln3-201ENSMUST00000057254 Mfap1bC0HKD9 439 aaKnown RBP11.12□□□□□ -0.63
Ubqln3-201ENSMUST00000057254 Gm21671G3UY31 267 aa11.12□□□□□ -0.63
Ubqln3-201ENSMUST00000057254 Smarca5Q91ZW3 1051 aaKnown RBP11.12□□□□□ -0.63
Ubqln3-201ENSMUST00000057254 Igsf1Q7TQA1 1317 aa11.12□□□□□ -0.63
Ubqln3-201ENSMUST00000057254 Zfp777B9EKF4 885 aa11.11□□□□□ -0.63
Ubqln3-201ENSMUST00000057254 Dnai1Q8C0M8 701 aa11.11□□□□□ -0.63
Ubqln3-201ENSMUST00000057254 Zfp142G5E869 1843 aa11.11□□□□□ -0.63
Ubqln3-201ENSMUST00000057254 Bcl2l13P59017 434 aa11.11□□□□□ -0.63
Ubqln3-201ENSMUST00000057254 Hs1bp3Q3TC93 395 aa11.11□□□□□ -0.63
Ubqln3-201ENSMUST00000057254 FanclQ9CR14 375 aa11.11□□□□□ -0.63
Ubqln3-201ENSMUST00000057254 CarsQ9ER72 831 aaKnown RBP11.11□□□□□ -0.63
Ubqln3-201ENSMUST00000057254 Aox2Q5SGK3 1345 aa11.11□□□□□ -0.63
Ubqln3-201ENSMUST00000057254 Fgd1P52734 960 aa11.1□□□□□ -0.63
Ubqln3-201ENSMUST00000057254 Ccdc155Q80VJ8 648 aa11.1□□□□□ -0.63
Ubqln3-201ENSMUST00000057254 Rab11fip3Q8CHD8 1047 aa11.1□□□□□ -0.63
Ubqln3-201ENSMUST00000057254 OptnQ8K3K8 584 aa11.1□□□□□ -0.63
Ubqln3-201ENSMUST00000057254 Ccdc146E9Q9F7 977 aa11.1□□□□□ -0.63
Ubqln3-201ENSMUST00000057254 Atf5O70191 283 aa11.1□□□□□ -0.63
Ubqln3-201ENSMUST00000057254 Fam13aQ8BGI4 693 aa11.1□□□□□ -0.63
Ubqln3-201ENSMUST00000057254 Fkbp4P30416 458 aa11.09□□□□□ -0.63
Ubqln3-201ENSMUST00000057254 Pnpla7A2AJ88 1352 aa11.09□□□□□ -0.63
Ubqln3-201ENSMUST00000057254 Disp3A3KFU9 1347 aa11.09□□□□□ -0.63
Ubqln3-201ENSMUST00000057254 Eif4a1P60843 406 aaKnown RBP11.09□□□□□ -0.63
Ubqln3-201ENSMUST00000057254 Nol11Q8BJW5 723 aaKnown RBP11.09□□□□□ -0.63
Ubqln3-201ENSMUST00000057254 Aldh1l2Q8K009 923 aa11.09□□□□□ -0.63
Ubqln3-201ENSMUST00000057254 LifrP42703 1092 aa11.08□□□□□ -0.64
Ubqln3-201ENSMUST00000057254 Tm6sf1P58749 370 aa11.08□□□□□ -0.64
Ubqln3-201ENSMUST00000057254 Tbc1d32Q3URV1 1296 aa11.08□□□□□ -0.64
Ubqln3-201ENSMUST00000057254 Btbd11Q6GQW0 1109 aa11.08□□□□□ -0.64
Ubqln3-201ENSMUST00000057254 Abca15E9PWH4 1668 aa11.08□□□□□ -0.64
Ubqln3-201ENSMUST00000057254 CrklP47941 303 aa11.08□□□□□ -0.64
Ubqln3-201ENSMUST00000057254 Fam50bQ9WTJ8 334 aa11.08□□□□□ -0.64
Ubqln3-201ENSMUST00000057254 Wdr63B2RY71 923 aa11.07□□□□□ -0.64
Ubqln3-201ENSMUST00000057254 Ppm1gQ61074 542 aa11.07□□□□□ -0.64
Ubqln3-201ENSMUST00000057254 Zranb3Q6NZP1 1069 aa11.07□□□□□ -0.64
Ubqln3-201ENSMUST00000057254 Map7O88735 730 aa11.06□□□□□ -0.64
Ubqln3-201ENSMUST00000057254 Kif2cQ922S8 721 aa11.06□□□□□ -0.64
Ubqln3-201ENSMUST00000057254 Acsbg1Q99PU5 721 aa11.06□□□□□ -0.64
Ubqln3-201ENSMUST00000057254 Txnrd1Q9JMH6 613 aa11.06□□□□□ -0.64
Ubqln3-201ENSMUST00000057254 Wwc1Q5SXA9 1104 aa11.06□□□□□ -0.64
Ubqln3-201ENSMUST00000057254 Pdzd9Q9D9M4 266 aa11.06□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 7.3 ms