RNA–Protein interactions for RNA: ENSMUST00000052747.3

Nhlrc1-201, Transcript of E3 ubiquitin-protein ligase NHLRC1, mousemouse

APPRIS P1 BASIC

Gene Nhlrc1, Length 2,294 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc1-201ENSMUST00000052747 Anapc15-psA0A140T8L6 141 aa28.97■■■□□ 2.23
Nhlrc1-201ENSMUST00000052747 Smarca5Q91ZW3 1051 aaKnown RBP28.97■■■□□ 2.23
Nhlrc1-201ENSMUST00000052747 Rreb1Q3UH06 1700 aaKnown RBP28.96■■■□□ 2.23
Nhlrc1-201ENSMUST00000052747 Cdk12Q14AX6 1484 aaKnown RBP28.96■■■□□ 2.23
Nhlrc1-201ENSMUST00000052747 Prim1P20664 417 aa28.95■■■□□ 2.23
Nhlrc1-201ENSMUST00000052747 Phf23Q8BSN5 401 aa28.95■■■□□ 2.23
Nhlrc1-201ENSMUST00000052747 Tet3Q8BG87 1668 aa28.95■■■□□ 2.22
Nhlrc1-201ENSMUST00000052747 Dnajc5gQ8C632 165 aa28.95■■■□□ 2.22
Nhlrc1-201ENSMUST00000052747 1700010I14RikQ7TPG0 532 aa28.93■■■□□ 2.22
Nhlrc1-201ENSMUST00000052747 Rtf1A2AQ19 715 aaKnown RBP28.92■■■□□ 2.22
Nhlrc1-201ENSMUST00000052747 Sox12Q04890 314 aa28.92■■■□□ 2.22
Nhlrc1-201ENSMUST00000052747 Ppip5k2Q6ZQB6 1129 aa28.92■■■□□ 2.22
Nhlrc1-201ENSMUST00000052747 Ppp6r3Q922D4 844 aa28.91■■■□□ 2.22
Nhlrc1-201ENSMUST00000052747 Dmrtc1Q9D9R7 182 aa28.91■■■□□ 2.22
Nhlrc1-201ENSMUST00000052747 Pik3c2aQ61194 1686 aa28.91■■■□□ 2.22
Nhlrc1-201ENSMUST00000052747 Snap23O09044 210 aa28.9■■■□□ 2.22
Nhlrc1-201ENSMUST00000052747 EngaseQ8BX80 734 aa28.9■■■□□ 2.22
Nhlrc1-201ENSMUST00000052747 Parp14Q2EMV9 1817 aa28.9■■■□□ 2.22
Nhlrc1-201ENSMUST00000052747 Ubr1O70481 1757 aa28.9■■■□□ 2.22
Nhlrc1-201ENSMUST00000052747 Pdia3P27773 505 aaKnown RBP28.9■■■□□ 2.22
Nhlrc1-201ENSMUST00000052747 Sv2bQ8BG39 683 aa28.89■■■□□ 2.22
Nhlrc1-201ENSMUST00000052747 Dennd6aQ8BH65 605 aa28.89■■■□□ 2.22
Nhlrc1-201ENSMUST00000052747 FancaQ9JL70 1439 aa28.89■■■□□ 2.22
Nhlrc1-201ENSMUST00000052747 Slit2Q9R1B9 1521 aa28.88■■■□□ 2.21
Nhlrc1-201ENSMUST00000052747 Nucb1Q02819 459 aaKnown RBP28.88■■■□□ 2.21
Nhlrc1-201ENSMUST00000052747 Ipo4Q8VI75 1082 aa28.88■■■□□ 2.21
Nhlrc1-201ENSMUST00000052747 Arap3Q8R5G7 1538 aa28.88■■■□□ 2.21
Nhlrc1-201ENSMUST00000052747 Abcc10Q8R4P9 1501 aa28.87■■■□□ 2.21
Nhlrc1-201ENSMUST00000052747 Zfp777B9EKF4 885 aa28.87■■■□□ 2.21
Nhlrc1-201ENSMUST00000052747 Atg4a-psA0A0G2JFS9 396 aa28.86■■■□□ 2.21
Nhlrc1-201ENSMUST00000052747 Eya1P97767 591 aa28.86■■■□□ 2.21
Nhlrc1-201ENSMUST00000052747 Atg4aQ8C9S8 396 aa28.86■■■□□ 2.21
Nhlrc1-201ENSMUST00000052747 Cabp4Q8VHC5 271 aa28.86■■■□□ 2.21
Nhlrc1-201ENSMUST00000052747 Safb2Q80YR5 991 aaKnown RBP28.85■■■□□ 2.21
Nhlrc1-201ENSMUST00000052747 Camta1A2A891 1682 aa28.85■■■□□ 2.21
Nhlrc1-201ENSMUST00000052747 Col16a1Q8BLX7 1580 aa28.85■■■□□ 2.21
Nhlrc1-201ENSMUST00000052747 Idi1P58044 227 aa28.85■■■□□ 2.21
Nhlrc1-201ENSMUST00000052747 Cyp46a1Q9WVK8 500 aa28.85■■■□□ 2.21
Nhlrc1-201ENSMUST00000052747 Map2P20357 1828 aa28.84■■■□□ 2.21
Nhlrc1-201ENSMUST00000052747 Nckap5lQ6GQX2 1323 aa28.84■■■□□ 2.21
Nhlrc1-201ENSMUST00000052747 Casq1O09165 405 aa28.84■■■□□ 2.21
Nhlrc1-201ENSMUST00000052747 Il4rP16382 810 aa28.84■■■□□ 2.21
Nhlrc1-201ENSMUST00000052747 Stk11ipQ3TAA7 1072 aa28.84■■■□□ 2.21
Nhlrc1-201ENSMUST00000052747 DekQ7TNV0 380 aaKnown RBP28.84■■■□□ 2.21
Nhlrc1-201ENSMUST00000052747 Nlgn1Q99K10 843 aa28.84■■■□□ 2.21
Nhlrc1-201ENSMUST00000052747 Gm21190A0A0G2JGJ6 266 aa28.83■■■□□ 2.21
Nhlrc1-201ENSMUST00000052747 Adamtsl3G3UXC7 1706 aa28.83■■■□□ 2.21
Nhlrc1-201ENSMUST00000052747 Cc2d1aQ8K1A6 943 aa28.82■■■□□ 2.2
Nhlrc1-201ENSMUST00000052747 AU015836B2RUM3 263 aa28.82■■■□□ 2.2
Nhlrc1-201ENSMUST00000052747 Fam83gQ5SWY7 812 aa28.81■■■□□ 2.2
Nhlrc1-201ENSMUST00000052747 Phf14Q9D4H9 881 aa28.81■■■□□ 2.2
Nhlrc1-201ENSMUST00000052747 Plppr3Q7TPB0 716 aa28.8■■■□□ 2.2
Nhlrc1-201ENSMUST00000052747 D430041D05RikF6ZGR6 1678 aa28.79■■■□□ 2.2
Nhlrc1-201ENSMUST00000052747 Scn7aB1AYL1 1681 aa28.79■■■□□ 2.2
Nhlrc1-201ENSMUST00000052747 Msh6P54276 1358 aaKnown RBP28.79■■■□□ 2.2
Nhlrc1-201ENSMUST00000052747 Larp1bA0A0A6YXJ7 370 aaKnown RBP28.78■■■□□ 2.2
Nhlrc1-201ENSMUST00000052747 Ccne1Q61457 408 aa28.78■■■□□ 2.2
Nhlrc1-201ENSMUST00000052747 Q9D2X8 372 aa28.78■■■□□ 2.2
Nhlrc1-201ENSMUST00000052747 Elp1Q7TT37 1333 aaKnown RBP28.78■■■□□ 2.2
Nhlrc1-201ENSMUST00000052747 Mon2Q80TL7 1715 aa28.78■■■□□ 2.2
Nhlrc1-201ENSMUST00000052747 Igsf1Q7TQA1 1317 aa28.78■■■□□ 2.2
Nhlrc1-201ENSMUST00000052747 Frmpd2A0A140LI67 1392 aa28.77■■■□□ 2.2
Nhlrc1-201ENSMUST00000052747 Q3TQI7 289 aaKnown RBP28.77■■■□□ 2.2
Nhlrc1-201ENSMUST00000052747 Ptpn23Q6PB44 1692 aa28.77■■■□□ 2.2
Nhlrc1-201ENSMUST00000052747 Gnai2P08752 355 aaKnown RBP28.76■■■□□ 2.19
Nhlrc1-201ENSMUST00000052747 Bloc1s4Q8VED2 215 aa28.76■■■□□ 2.19
Nhlrc1-201ENSMUST00000052747 Trpm3Q5F4S9 1721 aa28.76■■■□□ 2.19
Nhlrc1-201ENSMUST00000052747 Bcar3Q9QZK2 820 aa28.76■■■□□ 2.19
Nhlrc1-201ENSMUST00000052747 Gm10563F6WIE4 79 aa28.74■■■□□ 2.19
Nhlrc1-201ENSMUST00000052747 Ap3b2Q9JME5 1082 aa28.74■■■□□ 2.19
Nhlrc1-201ENSMUST00000052747 C5P06684 1680 aa28.74■■■□□ 2.19
Nhlrc1-201ENSMUST00000052747 Srgap3Q812A2 1099 aa28.73■■■□□ 2.19
Nhlrc1-201ENSMUST00000052747 Foxp4Q9DBY0 795 aaKnown RBP28.73■■■□□ 2.19
Nhlrc1-201ENSMUST00000052747 Rims2Q9EQZ7 1530 aa28.72■■■□□ 2.19
Nhlrc1-201ENSMUST00000052747 Isy1Q69ZQ2 285 aaKnown RBP28.72■■■□□ 2.19
Nhlrc1-201ENSMUST00000052747 Erc2Q6PH08 957 aa28.72■■■□□ 2.19
Nhlrc1-201ENSMUST00000052747 Bag4Q8CI61 457 aa28.72■■■□□ 2.19
Nhlrc1-201ENSMUST00000052747 Nphp1Q9QY53 687 aa28.72■■■□□ 2.19
Nhlrc1-201ENSMUST00000052747 PtprvP70289 1705 aa28.72■■■□□ 2.19
Nhlrc1-201ENSMUST00000052747 Kif20aP97329 887 aa28.72■■■□□ 2.19
Nhlrc1-201ENSMUST00000052747 Als2Q920R0 1651 aa28.71■■■□□ 2.19
Nhlrc1-201ENSMUST00000052747 Hoxc9P09633 260 aa28.71■■■□□ 2.19
Nhlrc1-201ENSMUST00000052747 Ppp1r42Q8R1Z4 357 aa28.71■■■□□ 2.19
Nhlrc1-201ENSMUST00000052747 CalcaP70160 136 aa28.71■■■□□ 2.19
Nhlrc1-201ENSMUST00000052747 Cyp27a1Q9DBG1 533 aa28.7■■■□□ 2.18
Nhlrc1-201ENSMUST00000052747 Zkscan1Q8BGS3 561 aaKnown RBP28.69■■■□□ 2.18
Nhlrc1-201ENSMUST00000052747 HypkQ9CR41 129 aa28.69■■■□□ 2.18
Nhlrc1-201ENSMUST00000052747 ScaperF8VQ70 1398 aaKnown RBP28.69■■■□□ 2.18
Nhlrc1-201ENSMUST00000052747 Zkscan2G3X952 960 aa28.68■■■□□ 2.18
Nhlrc1-201ENSMUST00000052747 Rasa1E9PYG6 1038 aa28.66■■■□□ 2.18
Nhlrc1-201ENSMUST00000052747 RestQ8VIG1 1082 aa28.66■■■□□ 2.18
Nhlrc1-201ENSMUST00000052747 Mmp8O70138 465 aa28.66■■■□□ 2.18
Nhlrc1-201ENSMUST00000052747 Tmem132eQ6IEE6 982 aa28.66■■■□□ 2.18
Nhlrc1-201ENSMUST00000052747 Chpf2Q3UU43 768 aa28.65■■■□□ 2.18
Nhlrc1-201ENSMUST00000052747 Zkscan16A2ALW2 728 aa28.64■■■□□ 2.18
Nhlrc1-201ENSMUST00000052747 SlkO54988 1233 aa28.64■■■□□ 2.18
Nhlrc1-201ENSMUST00000052747 Tnnt1O88346 262 aa28.64■■■□□ 2.18
Nhlrc1-201ENSMUST00000052747 Hmox1P14901 289 aa28.64■■■□□ 2.18
Nhlrc1-201ENSMUST00000052747 Ptpdc1Q6NZK8 747 aa28.64■■■□□ 2.18
Nhlrc1-201ENSMUST00000052747 Mrps27Q8BK72 415 aaKnown RBP28.64■■■□□ 2.18
Retrieved 100 of 22,080 RNA–protein pairs in 38.1 ms