RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Nlgn1Q99K10 843 aa13.11□□□□□ -0.31
Msh3-201ENSMUST00000022220 Sytl4Q9R0Q1 673 aa13.11□□□□□ -0.31
Msh3-201ENSMUST00000022220 P2rx7Q9Z1M0 595 aa13.11□□□□□ -0.31
Msh3-201ENSMUST00000022220 Phlpp2Q8BXA7 1320 aa13.11□□□□□ -0.31
Msh3-201ENSMUST00000022220 Nos1Q9Z0J4 1429 aa13.11□□□□□ -0.31
Msh3-201ENSMUST00000022220 Filip1lQ6P6L0 1131 aa13.11□□□□□ -0.31
Msh3-201ENSMUST00000022220 Ppp1r42Q8R1Z4 357 aa13.11□□□□□ -0.31
Msh3-201ENSMUST00000022220 Slc35g1Q8BY79 368 aa13.11□□□□□ -0.31
Msh3-201ENSMUST00000022220 Ttc19Q8CC21 365 aa13.11□□□□□ -0.31
Msh3-201ENSMUST00000022220 Slain2Q8CI08 581 aa13.11□□□□□ -0.31
Msh3-201ENSMUST00000022220 ApobrQ8VBT6 942 aa13.11□□□□□ -0.31
Msh3-201ENSMUST00000022220 Tulp4Q9JIL5 1547 aa13.11□□□□□ -0.31
Msh3-201ENSMUST00000022220 Pola1P33609 1465 aa13.1□□□□□ -0.31
Msh3-201ENSMUST00000022220 Trim30aP15533 496 aa13.1□□□□□ -0.31
Msh3-201ENSMUST00000022220 Nol11Q8BJW5 723 aaKnown RBP13.1□□□□□ -0.31
Msh3-201ENSMUST00000022220 4930572O03RikQ8C5Y0 211 aa13.1□□□□□ -0.31
Msh3-201ENSMUST00000022220 PtmsQ9D0J8 101 aaKnown RBP13.1□□□□□ -0.31
Msh3-201ENSMUST00000022220 Setd1bQ8CFT2 1985 aa13.1□□□□□ -0.31
Msh3-201ENSMUST00000022220 Zap70P43404 618 aa13.1□□□□□ -0.31
Msh3-201ENSMUST00000022220 Jakmip1Q8BVL9 626 aa13.1□□□□□ -0.31
Msh3-201ENSMUST00000022220 Gripap1Q8VD04 806 aa13.1□□□□□ -0.31
Msh3-201ENSMUST00000022220 Myo3aQ8K3H5 1613 aa13.1□□□□□ -0.31
Msh3-201ENSMUST00000022220 Cbx1P83917 185 aaKnown RBP13.09□□□□□ -0.31
Msh3-201ENSMUST00000022220 Nsfl1cQ9CZ44 370 aaKnown RBP13.09□□□□□ -0.31
Msh3-201ENSMUST00000022220 Anapc15P60007 132 aa13.09□□□□□ -0.31
Msh3-201ENSMUST00000022220 AU019823E9PUQ3 292 aa13.08□□□□□ -0.31
Msh3-201ENSMUST00000022220 Zkscan2G3X952 960 aa13.08□□□□□ -0.31
Msh3-201ENSMUST00000022220 Babam1Q3UI43 333 aa13.08□□□□□ -0.31
Msh3-201ENSMUST00000022220 Slc5a1Q8C3K6 665 aa13.08□□□□□ -0.31
Msh3-201ENSMUST00000022220 CalcaP70160 136 aa13.08□□□□□ -0.32
Msh3-201ENSMUST00000022220 Ankib1Q6ZPS6 1085 aa13.08□□□□□ -0.32
Msh3-201ENSMUST00000022220 Kiaa1107Q80TK0 1369 aa13.08□□□□□ -0.32
Msh3-201ENSMUST00000022220 Ankrd44B2RXR6 993 aa13.07□□□□□ -0.32
Msh3-201ENSMUST00000022220 Pcdh10E9PXQ7 1057 aa13.07□□□□□ -0.32
Msh3-201ENSMUST00000022220 Bag4Q8CI61 457 aa13.07□□□□□ -0.32
Msh3-201ENSMUST00000022220 FanclQ9CR14 375 aa13.07□□□□□ -0.32
Msh3-201ENSMUST00000022220 Syce3B5KM66 88 aa13.07□□□□□ -0.32
Msh3-201ENSMUST00000022220 Eva1cP58659 440 aa13.07□□□□□ -0.32
Msh3-201ENSMUST00000022220 Bcar3Q9QZK2 820 aa13.07□□□□□ -0.32
Msh3-201ENSMUST00000022220 Zmym3Q9JLM4 1370 aa13.07□□□□□ -0.32
Msh3-201ENSMUST00000022220 Sos1Q62245 1319 aa13.07□□□□□ -0.32
Msh3-201ENSMUST00000022220 Kif4P33174 1231 aa13.07□□□□□ -0.32
Msh3-201ENSMUST00000022220 Strn4P58404 760 aa13.07□□□□□ -0.32
Msh3-201ENSMUST00000022220 Samd1D3YXK1 519 aa13.06□□□□□ -0.32
Msh3-201ENSMUST00000022220 Eif3bQ8JZQ9 803 aaKnown RBP13.06□□□□□ -0.32
Msh3-201ENSMUST00000022220 Adam1bQ8R534 806 aa13.06□□□□□ -0.32
Msh3-201ENSMUST00000022220 Txnrd1Q9JMH6 613 aa13.06□□□□□ -0.32
Msh3-201ENSMUST00000022220 Scaf11E9PZM7 1456 aaKnown RBP13.06□□□□□ -0.32
Msh3-201ENSMUST00000022220 NcapgE9PWG6 1004 aa13.06□□□□□ -0.32
Msh3-201ENSMUST00000022220 Hoxc9P09633 260 aa13.06□□□□□ -0.32
Msh3-201ENSMUST00000022220 Pdcl2Q78Y63 240 aa13.06□□□□□ -0.32
Msh3-201ENSMUST00000022220 Pank2Q3U4S0 443 aa13.05□□□□□ -0.32
Msh3-201ENSMUST00000022220 NexnQ7TPW1 607 aa13.05□□□□□ -0.32
Msh3-201ENSMUST00000022220 Zkscan1Q8BGS3 561 aaKnown RBP13.05□□□□□ -0.32
Msh3-201ENSMUST00000022220 Stard3nlQ9DCI3 235 aa13.05□□□□□ -0.32
Msh3-201ENSMUST00000022220 Ripk4Q9ERK0 786 aa13.05□□□□□ -0.32
Msh3-201ENSMUST00000022220 Fhod3Q76LL6 1578 aa13.05□□□□□ -0.32
Msh3-201ENSMUST00000022220 Hoxb7P09024 217 aa13.05□□□□□ -0.32
Msh3-201ENSMUST00000022220 Zhx1P70121 873 aa13.05□□□□□ -0.32
Msh3-201ENSMUST00000022220 Rbm27Q5SFM8 1060 aaKnown RBP13.05□□□□□ -0.32
Msh3-201ENSMUST00000022220 Erc2Q6PH08 957 aa13.05□□□□□ -0.32
Msh3-201ENSMUST00000022220 Gcc1Q9D4H2 778 aa13.05□□□□□ -0.32
Msh3-201ENSMUST00000022220 Ankrd50F7BE84 1390 aa13.05□□□□□ -0.32
Msh3-201ENSMUST00000022220 Igflr1Q3U4N7 345 aa13.05□□□□□ -0.32
Msh3-201ENSMUST00000022220 Nom1Q3UFM5 854 aaKnown RBP13.05□□□□□ -0.32
Msh3-201ENSMUST00000022220 Ptpdc1Q6NZK8 747 aa13.05□□□□□ -0.32
Msh3-201ENSMUST00000022220 Dhx30Q99PU8 1217 aaKnown RBP13.05□□□□□ -0.32
Msh3-201ENSMUST00000022220 Zfyve16Q80U44 1528 aa13.04□□□□□ -0.32
Msh3-201ENSMUST00000022220 Ttc41Q692V3 1318 aa13.04□□□□□ -0.32
Msh3-201ENSMUST00000022220 Rasa1E9PYG6 1038 aa13.04□□□□□ -0.32
Msh3-201ENSMUST00000022220 Gzf1Q4VBD9 706 aa13.04□□□□□ -0.32
Msh3-201ENSMUST00000022220 Sugp2Q8CH09 1067 aa13.04□□□□□ -0.32
Msh3-201ENSMUST00000022220 1700010I14RikQ7TPG0 532 aa13.04□□□□□ -0.32
Msh3-201ENSMUST00000022220 Slc39a6Q8C145 765 aa13.04□□□□□ -0.32
Msh3-201ENSMUST00000022220 Gys2Q8VCB3 704 aa13.04□□□□□ -0.32
Msh3-201ENSMUST00000022220 4931400O07RikQ9D4M5 137 aa13.04□□□□□ -0.32
Msh3-201ENSMUST00000022220 Kif3aP28741 701 aa13.04□□□□□ -0.32
Msh3-201ENSMUST00000022220 Usp48Q3V0C5 1052 aa13.04□□□□□ -0.32
Msh3-201ENSMUST00000022220 Map3k2Q61083 619 aa13.04□□□□□ -0.32
Msh3-201ENSMUST00000022220 Rcan3Q9JKK0 239 aa13.04□□□□□ -0.32
Msh3-201ENSMUST00000022220 Plekhd1B2RPU2 505 aa13.03□□□□□ -0.32
Msh3-201ENSMUST00000022220 St18Q80TY4 1045 aa13.03□□□□□ -0.32
Msh3-201ENSMUST00000022220 Tmx3Q8BXZ1 456 aa13.03□□□□□ -0.32
Msh3-201ENSMUST00000022220 Bloc1s4Q8VED2 215 aa13.03□□□□□ -0.32
Msh3-201ENSMUST00000022220 Mbd5B1AYB6 1498 aa13.03□□□□□ -0.32
Msh3-201ENSMUST00000022220 Gprasp1Q5U4C1 1347 aa13.03□□□□□ -0.32
Msh3-201ENSMUST00000022220 Gm973E9Q295 1059 aa13.03□□□□□ -0.32
Msh3-201ENSMUST00000022220 Gimap5Q8BWF2 308 aa13.03□□□□□ -0.32
Msh3-201ENSMUST00000022220 Bicdl1A0JNT9 577 aa13.03□□□□□ -0.32
Msh3-201ENSMUST00000022220 Mcm2P97310 904 aa13.03□□□□□ -0.32
Msh3-201ENSMUST00000022220 Fam13aQ8BGI4 693 aa13.03□□□□□ -0.32
Msh3-201ENSMUST00000022220 Mical1Q8VDP3 1048 aa13.03□□□□□ -0.32
Msh3-201ENSMUST00000022220 Abcc3B2RX12 1523 aa13.03□□□□□ -0.32
Msh3-201ENSMUST00000022220 Rnf17Q99MV7 1640 aa13.02□□□□□ -0.32
Msh3-201ENSMUST00000022220 Tex14Q7M6U3 1450 aa13.02□□□□□ -0.32
Msh3-201ENSMUST00000022220 GpkowQ56A08 488 aa13.02□□□□□ -0.32
Msh3-201ENSMUST00000022220 Fkbp5Q64378 456 aa13.02□□□□□ -0.32
Msh3-201ENSMUST00000022220 Ddx11Q6AXC6 880 aa13.02□□□□□ -0.32
Msh3-201ENSMUST00000022220 OptnQ8K3K8 584 aa13.02□□□□□ -0.32
Msh3-201ENSMUST00000022220 Dmrtc1Q9D9R7 182 aa13.02□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 58.5 ms