RNA–Protein interactions for RNA: ENSMUST00000014065.15

Clip3-201, Transcript of CAP-Gly domain-containing linker protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clip3, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3-201ENSMUST00000014065 Scd3Q99PL7 359 aa10.27□□□□□ -0.77
Clip3-201ENSMUST00000014065 CacybpQ9CXW3 229 aa10.27□□□□□ -0.77
Clip3-201ENSMUST00000014065 Snrnp48Q9D361 337 aa10.27□□□□□ -0.77
Clip3-201ENSMUST00000014065 Cyb5r1Q9DB73 305 aa10.27□□□□□ -0.77
Clip3-201ENSMUST00000014065 Padi4Q9Z183 666 aa10.27□□□□□ -0.77
Clip3-201ENSMUST00000014065 Polr2aP08775 1970 aaKnown RBP10.27□□□□□ -0.77
Clip3-201ENSMUST00000014065 Tmem245B1AZA5 876 aa10.27□□□□□ -0.77
Clip3-201ENSMUST00000014065 Gm20828J3KMI7 228 aa10.27□□□□□ -0.77
Clip3-201ENSMUST00000014065 TpmtO55060 240 aa10.27□□□□□ -0.77
Clip3-201ENSMUST00000014065 ClppO88696 272 aa10.27□□□□□ -0.77
Clip3-201ENSMUST00000014065 Myf6P15375 242 aa10.27□□□□□ -0.77
Clip3-201ENSMUST00000014065 Mbl1P39039 239 aa10.27□□□□□ -0.77
Clip3-201ENSMUST00000014065 Cct8P42932 548 aa10.27□□□□□ -0.77
Clip3-201ENSMUST00000014065 Galnt3P70419 633 aa10.27□□□□□ -0.77
Clip3-201ENSMUST00000014065 Gpr15Q0VDU3 360 aa10.27□□□□□ -0.77
Clip3-201ENSMUST00000014065 Shcbp1lQ3TTP0 639 aa10.27□□□□□ -0.77
Clip3-201ENSMUST00000014065 Kctd21Q3URF8 260 aa10.27□□□□□ -0.77
Clip3-201ENSMUST00000014065 Kansl1lQ5DTI6 991 aa10.27□□□□□ -0.77
Clip3-201ENSMUST00000014065 Slc6a3Q61327 619 aa10.27□□□□□ -0.77
Clip3-201ENSMUST00000014065 Usp7Q6A4J8 1103 aa10.27□□□□□ -0.77
Clip3-201ENSMUST00000014065 Znf219Q6IQX8 726 aa10.27□□□□□ -0.77
Clip3-201ENSMUST00000014065 Cyp2c54Q6XVG2 490 aa10.27□□□□□ -0.77
Clip3-201ENSMUST00000014065 Dna2Q6ZQJ5 1062 aa10.27□□□□□ -0.77
Clip3-201ENSMUST00000014065 Eif2s1Q6ZWX6 315 aaKnown RBP10.27□□□□□ -0.77
Clip3-201ENSMUST00000014065 Smarcal1Q8BJL0 910 aa10.27□□□□□ -0.77
Clip3-201ENSMUST00000014065 Thop1Q8C1A5 687 aaKnown RBP10.27□□□□□ -0.77
Clip3-201ENSMUST00000014065 Nckap1lQ8K1X4 1134 aa10.27□□□□□ -0.77
Clip3-201ENSMUST00000014065 Plac9Q8K262 108 aa10.27□□□□□ -0.77
Clip3-201ENSMUST00000014065 Rab15Q8K386 212 aa10.27□□□□□ -0.77
Clip3-201ENSMUST00000014065 Zdhhc12Q8VC90 267 aa10.27□□□□□ -0.77
Clip3-201ENSMUST00000014065 Plekha4Q8VC98 588 aa10.27□□□□□ -0.77
Clip3-201ENSMUST00000014065 Fbxo21Q8VDH1 627 aa10.27□□□□□ -0.77
Clip3-201ENSMUST00000014065 Rprd1aQ8VDS4 312 aa10.27□□□□□ -0.77
Clip3-201ENSMUST00000014065 Cdkal1Q91WE6 578 aa10.27□□□□□ -0.77
Clip3-201ENSMUST00000014065 DarsQ922B2 501 aaKnown RBP10.27□□□□□ -0.77
Clip3-201ENSMUST00000014065 Srfbp1Q9CZ91 441 aaKnown RBP10.27□□□□□ -0.77
Clip3-201ENSMUST00000014065 Cdkn2aipnlQ9D211 116 aaKnown RBP10.27□□□□□ -0.77
Clip3-201ENSMUST00000014065 Snx5Q9D8U8 404 aa10.27□□□□□ -0.77
Clip3-201ENSMUST00000014065 Gria3Q9Z2W9 888 aa10.27□□□□□ -0.77
Clip3-201ENSMUST00000014065 Slc6a21A0A1B0GSD2 748 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 Ighg3A0A1Y7VJN6 399 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 Smurf2A2A5Z6 748 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 Ttll9A2APC3 461 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 Vmn2r46L7N282 809 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 Bnc1O35914 961 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 Ankrd27Q3UMR0 1048 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 Abcb7Q61102 752 aaKnown RBP10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 Actr3bQ641P0 418 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 Rbl1Q64701 1063 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 Crtc1Q68ED7 630 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 Arhgap11aQ80Y19 987 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 Klhl42Q8BFQ9 493 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 Kctd13Q8BGV7 329 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 Tyw1Q8BJM7 721 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 4932411N23RikQ8C0S0 470 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 IlkapQ8R0F6 392 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 Mcoln3Q8R4F0 553 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 Syt12Q920N7 421 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 Slc35a5Q921R7 437 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 Pycr2Q922Q4 320 aaKnown RBP10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 Cmtm6Q9CZ69 183 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 Ccdc77Q9CZH8 489 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 Efcab1Q9D3N2 212 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 Clec2gQ9D676 269 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 Armc1Q9D7A8 282 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 IgtpQ9DCE9 423 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 Cyhr1Q9QXA1 311 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 Gm3604A0A087WPN2 559 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 Vmn2r38G3UYA8 861 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 Vmn2r33K7N705 861 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 Cyp2b19O55071 492 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 P01670 111 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 P01671 111 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 P01672 111 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 BgnP28653 369 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 Rab8aP55258 207 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 Kcnab3P97382 249 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 Cpne9Q1RLL3 553 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 Pfdn4Q3UWL8 134 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 Phf12Q5SPL2 1003 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 Itih2Q61703 946 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 Jak3Q62137 1100 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 Nr6a1Q64249 495 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 Slc13a5Q67BT3 572 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 KdsrQ6GV12 332 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 ErfeQ6PGN1 340 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 Plekha6Q7TQG1 1173 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 Olfr813Q7TRH5 310 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 Olfr667Q7TRP4 326 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 Tspan18Q80WR1 248 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 GancQ8BVW0 898 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 4932414N04RikQ8CEQ9 752 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 GaleQ8R059 347 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 Ccdc92Q8VDN4 314 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 Kiaa2013Q91X21 634 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 Acer3Q9D099 267 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 Olig2Q9EQW6 323 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 Plscr1Q9JJ00 328 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 Plod2Q9R0B9 737 aa10.26□□□□□ -0.77
Clip3-201ENSMUST00000014065 Lgr4A2ARI4 951 aa10.25□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 18.3 ms