Protein–RNA interactions for Protein: Q3TTP0

Shcbp1l, Testicular spindle-associated protein SHCBP1L, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shcbp1lQ3TTP0 Gm25239-201ENSMUST00000174915 86 ntBASIC38.24■■■■□ 3.71
Shcbp1lQ3TTP0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC35.31■■■■□ 3.24
Shcbp1lQ3TTP0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
Shcbp1lQ3TTP0 Gm15042-201ENSMUST00000120212 883 ntBASIC33.56■■■□□ 2.96
Shcbp1lQ3TTP0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
Shcbp1lQ3TTP0 Gm24109-201ENSMUST00000175489 103 ntBASIC33.06■■■□□ 2.88
Shcbp1lQ3TTP0 Gm15045-201ENSMUST00000117359 883 ntBASIC32.78■■■□□ 2.84
Shcbp1lQ3TTP0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Shcbp1lQ3TTP0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Shcbp1lQ3TTP0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32.29■■■□□ 2.76
Shcbp1lQ3TTP0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
Shcbp1lQ3TTP0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32.08■■■□□ 2.73
Shcbp1lQ3TTP0 Gm23366-201ENSMUST00000175022 89 ntBASIC32.02■■■□□ 2.72
Shcbp1lQ3TTP0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Shcbp1lQ3TTP0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Shcbp1lQ3TTP0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Shcbp1lQ3TTP0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31.12■■■□□ 2.57
Shcbp1lQ3TTP0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.02■■■□□ 2.56
Shcbp1lQ3TTP0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.97■■■□□ 2.55
Shcbp1lQ3TTP0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Shcbp1lQ3TTP0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.78■■■□□ 2.52
Shcbp1lQ3TTP0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Shcbp1lQ3TTP0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Shcbp1lQ3TTP0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30.62■■■□□ 2.49
Shcbp1lQ3TTP0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30.6■■■□□ 2.49
Shcbp1lQ3TTP0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
Shcbp1lQ3TTP0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
Shcbp1lQ3TTP0 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30.5■■■□□ 2.47
Shcbp1lQ3TTP0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC30.49■■■□□ 2.47
Shcbp1lQ3TTP0 Psd-208ENSMUST00000224556 2034 ntBASIC30.44■■■□□ 2.46
Shcbp1lQ3TTP0 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Shcbp1lQ3TTP0 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Shcbp1lQ3TTP0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Shcbp1lQ3TTP0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
Shcbp1lQ3TTP0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Shcbp1lQ3TTP0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.2■■■□□ 2.43
Shcbp1lQ3TTP0 Gm25238-201ENSMUST00000174914 89 ntBASIC30.12■■■□□ 2.41
Shcbp1lQ3TTP0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.97■■■□□ 2.39
Shcbp1lQ3TTP0 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Shcbp1lQ3TTP0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Shcbp1lQ3TTP0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Shcbp1lQ3TTP0 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.65■■■□□ 2.34
Shcbp1lQ3TTP0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Shcbp1lQ3TTP0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.64■■■□□ 2.34
Shcbp1lQ3TTP0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Shcbp1lQ3TTP0 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.52■■■□□ 2.32
Shcbp1lQ3TTP0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29.47■■■□□ 2.31
Shcbp1lQ3TTP0 Gm27325-201ENSMUST00000175467 74 ntBASIC29.41■■■□□ 2.3
Shcbp1lQ3TTP0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Shcbp1lQ3TTP0 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
Shcbp1lQ3TTP0 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.31■■■□□ 2.28
Shcbp1lQ3TTP0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Shcbp1lQ3TTP0 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29.22■■■□□ 2.27
Shcbp1lQ3TTP0 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.17■■■□□ 2.26
Shcbp1lQ3TTP0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29.17■■■□□ 2.26
Shcbp1lQ3TTP0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Shcbp1lQ3TTP0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.1■■■□□ 2.25
Shcbp1lQ3TTP0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.04■■■□□ 2.24
Shcbp1lQ3TTP0 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Shcbp1lQ3TTP0 Gm25262-201ENSMUST00000174934 133 ntBASIC28.89■■■□□ 2.22
Shcbp1lQ3TTP0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
Shcbp1lQ3TTP0 Rab21-202ENSMUST00000218831 843 ntBASIC28.84■■■□□ 2.21
Shcbp1lQ3TTP0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Shcbp1lQ3TTP0 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Shcbp1lQ3TTP0 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Shcbp1lQ3TTP0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28.78■■■□□ 2.2
Shcbp1lQ3TTP0 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.74■■■□□ 2.19
Shcbp1lQ3TTP0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Shcbp1lQ3TTP0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
Shcbp1lQ3TTP0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Shcbp1lQ3TTP0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Shcbp1lQ3TTP0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC28.65■■■□□ 2.18
Shcbp1lQ3TTP0 Gm10524-201ENSMUST00000181931 1893 ntBASIC28.63■■■□□ 2.17
Shcbp1lQ3TTP0 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.59■■■□□ 2.17
Shcbp1lQ3TTP0 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Shcbp1lQ3TTP0 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Shcbp1lQ3TTP0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC28.5■■■□□ 2.15
Shcbp1lQ3TTP0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Shcbp1lQ3TTP0 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.45■■■□□ 2.14
Shcbp1lQ3TTP0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Shcbp1lQ3TTP0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
Shcbp1lQ3TTP0 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.43■■■□□ 2.14
Shcbp1lQ3TTP0 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
Shcbp1lQ3TTP0 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Shcbp1lQ3TTP0 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.33■■■□□ 2.13
Shcbp1lQ3TTP0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC28.31■■■□□ 2.12
Shcbp1lQ3TTP0 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28.31■■■□□ 2.12
Shcbp1lQ3TTP0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Shcbp1lQ3TTP0 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC28.22■■■□□ 2.11
Shcbp1lQ3TTP0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Shcbp1lQ3TTP0 Gm42596-201ENSMUST00000196305 1958 ntBASIC28.21■■■□□ 2.11
Shcbp1lQ3TTP0 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.21■■■□□ 2.11
Shcbp1lQ3TTP0 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Shcbp1lQ3TTP0 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Shcbp1lQ3TTP0 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.14■■■□□ 2.1
Shcbp1lQ3TTP0 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
Shcbp1lQ3TTP0 Gm26115-201ENSMUST00000175605 87 ntBASIC28.12■■■□□ 2.09
Shcbp1lQ3TTP0 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Shcbp1lQ3TTP0 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.08■■■□□ 2.09
Shcbp1lQ3TTP0 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC28.05■■■□□ 2.08
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms