Protein–RNA interactions for Protein: Q64249

Nr6a1, Nuclear receptor subfamily 6 group A member 1, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr6a1Q64249 Gm25239-201ENSMUST00000174915 86 ntBASIC35.23■■■■□ 3.23
Nr6a1Q64249 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
Nr6a1Q64249 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
Nr6a1Q64249 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Nr6a1Q64249 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Nr6a1Q64249 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32.13■■■□□ 2.73
Nr6a1Q64249 Psd-208ENSMUST00000224556 2034 ntBASIC31.03■■■□□ 2.56
Nr6a1Q64249 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Nr6a1Q64249 Gm24109-201ENSMUST00000175489 103 ntBASIC30.72■■■□□ 2.51
Nr6a1Q64249 Gm15042-201ENSMUST00000120212 883 ntBASIC30.69■■■□□ 2.5
Nr6a1Q64249 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
Nr6a1Q64249 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Nr6a1Q64249 Gm15045-201ENSMUST00000117359 883 ntBASIC30.11■■■□□ 2.41
Nr6a1Q64249 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Nr6a1Q64249 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29.99■■■□□ 2.39
Nr6a1Q64249 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Nr6a1Q64249 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Nr6a1Q64249 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
Nr6a1Q64249 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Nr6a1Q64249 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29.75■■■□□ 2.35
Nr6a1Q64249 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Nr6a1Q64249 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Nr6a1Q64249 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
Nr6a1Q64249 Gm23366-201ENSMUST00000175022 89 ntBASIC29.39■■■□□ 2.3
Nr6a1Q64249 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.27
Nr6a1Q64249 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Nr6a1Q64249 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Nr6a1Q64249 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
Nr6a1Q64249 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Nr6a1Q64249 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.18■■■□□ 2.26
Nr6a1Q64249 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.11■■■□□ 2.25
Nr6a1Q64249 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.1■■■□□ 2.25
Nr6a1Q64249 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.96■■■□□ 2.23
Nr6a1Q64249 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28.9■■■□□ 2.22
Nr6a1Q64249 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Nr6a1Q64249 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Nr6a1Q64249 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28.77■■■□□ 2.2
Nr6a1Q64249 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Nr6a1Q64249 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Nr6a1Q64249 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.63■■■□□ 2.17
Nr6a1Q64249 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC28.51■■■□□ 2.15
Nr6a1Q64249 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Nr6a1Q64249 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC28.47■■■□□ 2.15
Nr6a1Q64249 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.47■■■□□ 2.15
Nr6a1Q64249 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.46■■■□□ 2.15
Nr6a1Q64249 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Nr6a1Q64249 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Nr6a1Q64249 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.4■■■□□ 2.14
Nr6a1Q64249 Gm10524-201ENSMUST00000181931 1893 ntBASIC28.33■■■□□ 2.13
Nr6a1Q64249 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Nr6a1Q64249 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Nr6a1Q64249 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Nr6a1Q64249 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
Nr6a1Q64249 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Nr6a1Q64249 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Nr6a1Q64249 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC27.97■■■□□ 2.07
Nr6a1Q64249 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Nr6a1Q64249 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Nr6a1Q64249 Gm25238-201ENSMUST00000174914 89 ntBASIC27.9■■■□□ 2.06
Nr6a1Q64249 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.8■■■□□ 2.04
Nr6a1Q64249 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Nr6a1Q64249 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Nr6a1Q64249 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
Nr6a1Q64249 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27.64■■■□□ 2.02
Nr6a1Q64249 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.58■■■□□ 2.01
Nr6a1Q64249 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
Nr6a1Q64249 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Nr6a1Q64249 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Nr6a1Q64249 Gm42596-201ENSMUST00000196305 1958 ntBASIC27.46■■□□□ 1.99
Nr6a1Q64249 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.42■■□□□ 1.98
Nr6a1Q64249 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Nr6a1Q64249 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.98
Nr6a1Q64249 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
Nr6a1Q64249 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Nr6a1Q64249 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Nr6a1Q64249 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC27.34■■□□□ 1.97
Nr6a1Q64249 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27.32■■□□□ 1.96
Nr6a1Q64249 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Nr6a1Q64249 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
Nr6a1Q64249 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Nr6a1Q64249 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC27.25■■□□□ 1.95
Nr6a1Q64249 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Nr6a1Q64249 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Nr6a1Q64249 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC27.13■■□□□ 1.93
Nr6a1Q64249 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Nr6a1Q64249 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Nr6a1Q64249 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC27.08■■□□□ 1.93
Nr6a1Q64249 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC27.01■■□□□ 1.91
Nr6a1Q64249 Gm27325-201ENSMUST00000175467 74 ntBASIC27■■□□□ 1.91
Nr6a1Q64249 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.96■■□□□ 1.91
Nr6a1Q64249 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Nr6a1Q64249 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Nr6a1Q64249 Gm25262-201ENSMUST00000174934 133 ntBASIC26.95■■□□□ 1.9
Nr6a1Q64249 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Nr6a1Q64249 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Nr6a1Q64249 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Nr6a1Q64249 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Nr6a1Q64249 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Nr6a1Q64249 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Nr6a1Q64249 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms