Protein–RNA interactions for Protein: Q9D3N2

Efcab1, EF-hand calcium-binding domain-containing protein 1, mousemouse

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efcab1Q9D3N2 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32,86■■■□□ 2,85
Efcab1Q9D3N2 Gm25239-201ENSMUST00000174915 86 ntBASIC31,74■■■□□ 2,67
Efcab1Q9D3N2 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31,74■■■□□ 2,67
Efcab1Q9D3N2 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31,66■■■□□ 2,66
Efcab1Q9D3N2 Psd-208ENSMUST00000224556 2034 ntBASIC30,86■■■□□ 2,53
Efcab1Q9D3N2 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30,53■■■□□ 2,48
Efcab1Q9D3N2 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30,07■■■□□ 2,4
Efcab1Q9D3N2 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30,06■■■□□ 2,4
Efcab1Q9D3N2 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29,86■■■□□ 2,37
Efcab1Q9D3N2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29,51■■■□□ 2,31
Efcab1Q9D3N2 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29,47■■■□□ 2,31
Efcab1Q9D3N2 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29,44■■■□□ 2,3
Efcab1Q9D3N2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29,41■■■□□ 2,3
Efcab1Q9D3N2 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29■■■□□ 2,23
Efcab1Q9D3N2 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28,99■■■□□ 2,23
Efcab1Q9D3N2 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28,99■■■□□ 2,23
Efcab1Q9D3N2 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28,87■■■□□ 2,21
Efcab1Q9D3N2 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC28,83■■■□□ 2,21
Efcab1Q9D3N2 Gm15042-201ENSMUST00000120212 883 ntBASIC28,78■■■□□ 2,2
Efcab1Q9D3N2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28,73■■■□□ 2,19
Efcab1Q9D3N2 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC28,63■■■□□ 2,17
Efcab1Q9D3N2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28,59■■■□□ 2,17
Efcab1Q9D3N2 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28,59■■■□□ 2,17
Efcab1Q9D3N2 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28,55■■■□□ 2,16
Efcab1Q9D3N2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28,36■■■□□ 2,13
Efcab1Q9D3N2 Gm15045-201ENSMUST00000117359 883 ntBASIC28,31■■■□□ 2,12
Efcab1Q9D3N2 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28,27■■■□□ 2,12
Efcab1Q9D3N2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28,13■■■□□ 2,09
Efcab1Q9D3N2 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28,12■■■□□ 2,09
Efcab1Q9D3N2 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28,07■■■□□ 2,08
Efcab1Q9D3N2 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28,02■■■□□ 2,08
Efcab1Q9D3N2 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27,99■■■□□ 2,07
Efcab1Q9D3N2 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27,97■■■□□ 2,07
Efcab1Q9D3N2 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27,9■■■□□ 2,06
Efcab1Q9D3N2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27,89■■■□□ 2,06
Efcab1Q9D3N2 Gm10524-201ENSMUST00000181931 1893 ntBASIC27,85■■■□□ 2,05
Efcab1Q9D3N2 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27,77■■■□□ 2,04
Efcab1Q9D3N2 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27,76■■■□□ 2,03
Efcab1Q9D3N2 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27,72■■■□□ 2,03
Efcab1Q9D3N2 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC27,72■■■□□ 2,03
Efcab1Q9D3N2 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27,68■■■□□ 2,02
Efcab1Q9D3N2 Gm42596-201ENSMUST00000196305 1958 ntBASIC27,66■■■□□ 2,02
Efcab1Q9D3N2 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27,59■■■□□ 2,01
Efcab1Q9D3N2 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27,56■■■□□ 2
Efcab1Q9D3N2 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC27,53■■■□□ 2
Efcab1Q9D3N2 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC27,52■■■□□ 2
Efcab1Q9D3N2 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC27,44■■□□□ 1,98
Efcab1Q9D3N2 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27,42■■□□□ 1,98
Efcab1Q9D3N2 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC27,41■■□□□ 1,98
Efcab1Q9D3N2 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC27,36■■□□□ 1,97
Efcab1Q9D3N2 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC27,29■■□□□ 1,96
Efcab1Q9D3N2 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27,28■■□□□ 1,96
Efcab1Q9D3N2 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC27,14■■□□□ 1,93
Efcab1Q9D3N2 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC27,12■■□□□ 1,93
Efcab1Q9D3N2 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27,06■■□□□ 1,92
Efcab1Q9D3N2 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27,05■■□□□ 1,92
Efcab1Q9D3N2 Gm24109-201ENSMUST00000175489 103 ntBASIC27,02■■□□□ 1,92
Efcab1Q9D3N2 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26,99■■□□□ 1,91
Efcab1Q9D3N2 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26,92■■□□□ 1,9
Efcab1Q9D3N2 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26,91■■□□□ 1,9
Efcab1Q9D3N2 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26,87■■□□□ 1,89
Efcab1Q9D3N2 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26,86■■□□□ 1,89
Efcab1Q9D3N2 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26,86■■□□□ 1,89
Efcab1Q9D3N2 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26,84■■□□□ 1,89
Efcab1Q9D3N2 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26,8■■□□□ 1,88
Efcab1Q9D3N2 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC26,76■■□□□ 1,87
Efcab1Q9D3N2 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26,75■■□□□ 1,87
Efcab1Q9D3N2 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26,72■■□□□ 1,87
Efcab1Q9D3N2 Gm23366-201ENSMUST00000175022 89 ntBASIC26,68■■□□□ 1,86
Efcab1Q9D3N2 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26,67■■□□□ 1,86
Efcab1Q9D3N2 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26,62■■□□□ 1,85
Efcab1Q9D3N2 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26,61■■□□□ 1,85
Efcab1Q9D3N2 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26,54■■□□□ 1,84
Efcab1Q9D3N2 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26,53■■□□□ 1,84
Efcab1Q9D3N2 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26,52■■□□□ 1,84
Efcab1Q9D3N2 AC153911.1-202ENSMUST00000218534 1034 ntBASIC26,48■■□□□ 1,83
Efcab1Q9D3N2 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26,47■■□□□ 1,83
Efcab1Q9D3N2 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26,47■■□□□ 1,83
Efcab1Q9D3N2 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC26,46■■□□□ 1,83
Efcab1Q9D3N2 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC26,46■■□□□ 1,83
Efcab1Q9D3N2 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26,4■■□□□ 1,82
Efcab1Q9D3N2 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC26,38■■□□□ 1,81
Efcab1Q9D3N2 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC26,38■■□□□ 1,81
Efcab1Q9D3N2 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26,3■■□□□ 1,8
Efcab1Q9D3N2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC26,3■■□□□ 1,8
Efcab1Q9D3N2 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26,24■■□□□ 1,79
Efcab1Q9D3N2 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC26,24■■□□□ 1,79
Efcab1Q9D3N2 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC26,23■■□□□ 1,79
Efcab1Q9D3N2 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26,23■■□□□ 1,79
Efcab1Q9D3N2 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC26,22■■□□□ 1,79
Efcab1Q9D3N2 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26,14■■□□□ 1,77
Efcab1Q9D3N2 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26,12■■□□□ 1,77
Efcab1Q9D3N2 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC26,12■■□□□ 1,77
Efcab1Q9D3N2 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC26,09■■□□□ 1,77
Efcab1Q9D3N2 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC26,08■■□□□ 1,77
Efcab1Q9D3N2 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26,08■■□□□ 1,77
Efcab1Q9D3N2 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC26■■□□□ 1,75
Efcab1Q9D3N2 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25,96■■□□□ 1,75
Efcab1Q9D3N2 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25,95■■□□□ 1,75
Efcab1Q9D3N2 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25,93■■□□□ 1,74
Retrieved 100 of 76,532 protein–RNA pairs in 12,3 ms