Protein–RNA interactions for Protein: Q9D361

Snrnp48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp48Q9D361 Gm25239-201ENSMUST00000174915 86 ntBASIC36.84■■■■□ 3.49
Snrnp48Q9D361 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.99■■■■□ 3.03
Snrnp48Q9D361 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC33.81■■■■□ 3
Snrnp48Q9D361 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
Snrnp48Q9D361 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
Snrnp48Q9D361 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32.94■■■□□ 2.86
Snrnp48Q9D361 Gm15042-201ENSMUST00000120212 883 ntBASIC32.7■■■□□ 2.83
Snrnp48Q9D361 Gm15045-201ENSMUST00000117359 883 ntBASIC32.05■■■□□ 2.72
Snrnp48Q9D361 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Snrnp48Q9D361 Gm24109-201ENSMUST00000175489 103 ntBASIC31.7■■■□□ 2.67
Snrnp48Q9D361 Psd-208ENSMUST00000224556 2034 ntBASIC31.53■■■□□ 2.64
Snrnp48Q9D361 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Snrnp48Q9D361 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31.25■■■□□ 2.59
Snrnp48Q9D361 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Snrnp48Q9D361 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
Snrnp48Q9D361 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
Snrnp48Q9D361 Gm23366-201ENSMUST00000175022 89 ntBASIC30.88■■■□□ 2.53
Snrnp48Q9D361 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
Snrnp48Q9D361 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
Snrnp48Q9D361 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Snrnp48Q9D361 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Snrnp48Q9D361 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC30.6■■■□□ 2.49
Snrnp48Q9D361 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Snrnp48Q9D361 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
Snrnp48Q9D361 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC30.52■■■□□ 2.48
Snrnp48Q9D361 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30.49■■■□□ 2.47
Snrnp48Q9D361 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Snrnp48Q9D361 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Snrnp48Q9D361 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Snrnp48Q9D361 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Snrnp48Q9D361 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Snrnp48Q9D361 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30.15■■■□□ 2.42
Snrnp48Q9D361 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.12■■■□□ 2.41
Snrnp48Q9D361 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Snrnp48Q9D361 AC153911.1-202ENSMUST00000218534 1034 ntBASIC29.97■■■□□ 2.39
Snrnp48Q9D361 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.95■■■□□ 2.39
Snrnp48Q9D361 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Snrnp48Q9D361 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Snrnp48Q9D361 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29.66■■■□□ 2.34
Snrnp48Q9D361 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29.56■■■□□ 2.32
Snrnp48Q9D361 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Snrnp48Q9D361 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC29.23■■■□□ 2.27
Snrnp48Q9D361 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Snrnp48Q9D361 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.21■■■□□ 2.27
Snrnp48Q9D361 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.2■■■□□ 2.26
Snrnp48Q9D361 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
Snrnp48Q9D361 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29.17■■■□□ 2.26
Snrnp48Q9D361 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Snrnp48Q9D361 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Snrnp48Q9D361 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Snrnp48Q9D361 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Snrnp48Q9D361 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Snrnp48Q9D361 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC28.96■■■□□ 2.23
Snrnp48Q9D361 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
Snrnp48Q9D361 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Snrnp48Q9D361 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC28.9■■■□□ 2.22
Snrnp48Q9D361 Gm25238-201ENSMUST00000174914 89 ntBASIC28.9■■■□□ 2.22
Snrnp48Q9D361 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Snrnp48Q9D361 Gm27325-201ENSMUST00000175467 74 ntBASIC28.76■■■□□ 2.19
Snrnp48Q9D361 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Snrnp48Q9D361 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC28.74■■■□□ 2.19
Snrnp48Q9D361 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28.69■■■□□ 2.18
Snrnp48Q9D361 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Snrnp48Q9D361 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC28.65■■■□□ 2.18
Snrnp48Q9D361 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.65■■■□□ 2.18
Snrnp48Q9D361 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC28.64■■■□□ 2.18
Snrnp48Q9D361 CT025624.2-201ENSMUST00000223609 1909 ntBASIC28.62■■■□□ 2.17
Snrnp48Q9D361 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Snrnp48Q9D361 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC28.6■■■□□ 2.17
Snrnp48Q9D361 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC28.59■■■□□ 2.17
Snrnp48Q9D361 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28.49■■■□□ 2.15
Snrnp48Q9D361 Gm42596-201ENSMUST00000196305 1958 ntBASIC28.48■■■□□ 2.15
Snrnp48Q9D361 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Snrnp48Q9D361 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC28.47■■■□□ 2.15
Snrnp48Q9D361 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Snrnp48Q9D361 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28.23■■■□□ 2.11
Snrnp48Q9D361 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Snrnp48Q9D361 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.19■■■□□ 2.1
Snrnp48Q9D361 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Snrnp48Q9D361 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.12■■■□□ 2.09
Snrnp48Q9D361 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Snrnp48Q9D361 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Snrnp48Q9D361 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Snrnp48Q9D361 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Snrnp48Q9D361 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Snrnp48Q9D361 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Snrnp48Q9D361 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC27.96■■■□□ 2.07
Snrnp48Q9D361 Rab21-202ENSMUST00000218831 843 ntBASIC27.93■■■□□ 2.06
Snrnp48Q9D361 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
Snrnp48Q9D361 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.9■■■□□ 2.06
Snrnp48Q9D361 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Snrnp48Q9D361 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Snrnp48Q9D361 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Snrnp48Q9D361 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC27.8■■■□□ 2.04
Snrnp48Q9D361 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC27.79■■■□□ 2.04
Snrnp48Q9D361 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Snrnp48Q9D361 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Snrnp48Q9D361 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27.77■■■□□ 2.04
Snrnp48Q9D361 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC27.77■■■□□ 2.04
Snrnp48Q9D361 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms