RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 SLC39A3Q9BRY0 314 aa16.44■□□□□ 0.22
RIF1-204ENST00000430328 H0Y858 1186 aa16.44■□□□□ 0.22
RIF1-204ENST00000430328 SLC6A4P31645 630 aa16.44■□□□□ 0.22
RIF1-204ENST00000430328 B3GNT4Q9C0J1 378 aa16.44■□□□□ 0.22
RIF1-204ENST00000430328 RGCCQ9H4X1 137 aa16.44■□□□□ 0.22
RIF1-204ENST00000430328 MROH8Q9H579 483 aa16.44■□□□□ 0.22
RIF1-204ENST00000430328 POLR3BQ9NW08 1133 aaPredicted RBP16.44■□□□□ 0.22
RIF1-204ENST00000430328 PDP1Q9P0J1 537 aaPredicted RBP16.44■□□□□ 0.22
RIF1-204ENST00000430328 PRAMEF1O95521 474 aa16.44■□□□□ 0.22
RIF1-204ENST00000430328 CASP9P55211 416 aa16.44■□□□□ 0.22
RIF1-204ENST00000430328 HSPA14Q0VDF9 509 aa16.44■□□□□ 0.22
RIF1-204ENST00000430328 C16orf46Q6P387 395 aa16.44■□□□□ 0.22
RIF1-204ENST00000430328 NKX2-3Q8TAU0 364 aa16.44■□□□□ 0.22
RIF1-204ENST00000430328 BAP1Q92560 729 aa16.44■□□□□ 0.22
RIF1-204ENST00000430328 KLHL15Q96M94 604 aa16.44■□□□□ 0.22
RIF1-204ENST00000430328 PRICKLE1Q96MT3 831 aaPredicted RBP16.44■□□□□ 0.22
RIF1-204ENST00000430328 GTPBP2Q9BX10 602 aaKnown RBP16.44■□□□□ 0.22
RIF1-204ENST00000430328 ZNF717Q9BY31 904 aaPredicted RBP16.44■□□□□ 0.22
RIF1-204ENST00000430328 GULP1Q9UBP9 304 aa16.44■□□□□ 0.22
RIF1-204ENST00000430328 PLB1Q6P1J6 1458 aa16.43■□□□□ 0.22
RIF1-204ENST00000430328 C17orf102A2RUQ5 167 aa16.43■□□□□ 0.22
RIF1-204ENST00000430328 FXR2P51116 673 aaKnown RBP eCLIP16.43■□□□□ 0.224e-7■■■■□ 26.7
RIF1-204ENST00000430328 AHSA2Q719I0 299 aa16.43■□□□□ 0.22
RIF1-204ENST00000430328 FAM83AQ86UY5 434 aa16.43■□□□□ 0.22
RIF1-204ENST00000430328 ANKRD13AQ8IZ07 590 aa16.43■□□□□ 0.22
RIF1-204ENST00000430328 POLR1EQ9GZS1 481 aaKnown RBP16.43■□□□□ 0.22
RIF1-204ENST00000430328 ATP13A1Q9HD20 1204 aa16.43■□□□□ 0.22
RIF1-204ENST00000430328 C21orf2O43822 256 aa16.43■□□□□ 0.22
RIF1-204ENST00000430328 IFNA10P01566 189 aa16.43■□□□□ 0.22
RIF1-204ENST00000430328 MMP13P45452 471 aa16.43■□□□□ 0.22
RIF1-204ENST00000430328 RNF180Q86T96 592 aa16.43■□□□□ 0.22
RIF1-204ENST00000430328 PARGQ86W56 976 aa16.43■□□□□ 0.22
RIF1-204ENST00000430328 OR14K1Q8NGZ2 314 aa16.43■□□□□ 0.22
RIF1-204ENST00000430328 RNF38Q9H0F5 515 aa16.43■□□□□ 0.22
RIF1-204ENST00000430328 HMGCS2P54868 508 aa16.43■□□□□ 0.22
RIF1-204ENST00000430328 RIPPLY1Q0D2K3 151 aa16.43■□□□□ 0.22
RIF1-204ENST00000430328 ARFRP1Q13795 201 aa16.43■□□□□ 0.22
RIF1-204ENST00000430328 OXR1Q8N573 874 aa16.43■□□□□ 0.22
RIF1-204ENST00000430328 HSPA12BQ96MM6 686 aa16.43■□□□□ 0.22
RIF1-204ENST00000430328 MUC13Q9H3R2 512 aa16.43■□□□□ 0.22
RIF1-204ENST00000430328 TMEM27Q9HBJ8 222 aa16.43■□□□□ 0.22
RIF1-204ENST00000430328 OSGEPQ9NPF4 335 aa16.43■□□□□ 0.22
RIF1-204ENST00000430328 THPOP40225 353 aa16.43■□□□□ 0.22
RIF1-204ENST00000430328 S100A10P60903 97 aa16.43■□□□□ 0.22
RIF1-204ENST00000430328 MAB21L1Q13394 359 aa16.43■□□□□ 0.22
RIF1-204ENST00000430328 NAE1Q13564 534 aa16.43■□□□□ 0.22
RIF1-204ENST00000430328 TLR1Q15399 786 aa16.43■□□□□ 0.22
RIF1-204ENST00000430328 ARSJQ5FYB0 599 aaPredicted RBP16.43■□□□□ 0.22
RIF1-204ENST00000430328 FOXRED2Q8IWF2 684 aa16.43■□□□□ 0.22
RIF1-204ENST00000430328 FAM13CQ8NE31 585 aa16.43■□□□□ 0.22
RIF1-204ENST00000430328 VAT1Q99536 393 aa16.43■□□□□ 0.22
RIF1-204ENST00000430328 TBC1D17Q9HA65 648 aa16.43■□□□□ 0.22
RIF1-204ENST00000430328 CIB4A0PJX0 185 aa16.43■□□□□ 0.22
RIF1-204ENST00000430328 LRATO95237 230 aa16.43■□□□□ 0.22
RIF1-204ENST00000430328 KCNJ2P63252 427 aa16.43■□□□□ 0.22
RIF1-204ENST00000430328 PPCDCQ96CD2 204 aa16.43■□□□□ 0.22
RIF1-204ENST00000430328 MRPS33Q9Y291 106 aaKnown RBP16.43■□□□□ 0.22
RIF1-204ENST00000430328 FXYD6-FXYD2A0A087WZ82 144 aa16.43■□□□□ 0.22
RIF1-204ENST00000430328 ERAL1O75616 437 aaKnown RBP16.43■□□□□ 0.22
RIF1-204ENST00000430328 SLC22A3O75751 556 aa16.43■□□□□ 0.22
RIF1-204ENST00000430328 ADRA1DP25100 572 aa16.43■□□□□ 0.22
RIF1-204ENST00000430328 RAB5BP61020 215 aa16.43■□□□□ 0.22
RIF1-204ENST00000430328 CCDC28AQ8IWP9 274 aa16.43■□□□□ 0.22
RIF1-204ENST00000430328 NODALQ96S42 347 aa16.43■□□□□ 0.22
RIF1-204ENST00000430328 ORAI2Q96SN7 254 aa16.43■□□□□ 0.22
RIF1-204ENST00000430328 FXYD6Q9H0Q3 95 aa16.43■□□□□ 0.22
RIF1-204ENST00000430328 CISHQ9NSE2 258 aa16.43■□□□□ 0.22
RIF1-204ENST00000430328 TVP23AA6NH52 213 aa16.42■□□□□ 0.22
RIF1-204ENST00000430328 PTPAQ15257 358 aa16.42■□□□□ 0.22
RIF1-204ENST00000430328 USP30Q70CQ3 517 aa16.42■□□□□ 0.22
RIF1-204ENST00000430328 GTF3C2Q8WUA4 911 aaPredicted RBP16.42■□□□□ 0.22
RIF1-204ENST00000430328 OTUB2Q96DC9 234 aa16.42■□□□□ 0.22
RIF1-204ENST00000430328 OR5B12Q96R08 314 aa16.42■□□□□ 0.22
RIF1-204ENST00000430328 RPLP0P05388 317 aaKnown RBP16.42■□□□□ 0.22
RIF1-204ENST00000430328 ERP29P30040 261 aaKnown RBP16.42■□□□□ 0.22
RIF1-204ENST00000430328 NPTX2P47972 431 aa16.42■□□□□ 0.22
RIF1-204ENST00000430328 WSCD2Q2TBF2 565 aa16.42■□□□□ 0.22
RIF1-204ENST00000430328 SPIN3Q5JUX0 258 aa16.42■□□□□ 0.22
RIF1-204ENST00000430328 TTI2Q6NXR4 508 aa16.42■□□□□ 0.22
RIF1-204ENST00000430328 CLEC17AQ6ZS10 378 aa16.42■□□□□ 0.22
RIF1-204ENST00000430328 C1orf186Q6ZWK4 172 aa16.42■□□□□ 0.22
RIF1-204ENST00000430328 CXorf40BQ96DE9 158 aa16.42■□□□□ 0.22
RIF1-204ENST00000430328 MXRA8Q9BRK3 442 aa16.42■□□□□ 0.22
RIF1-204ENST00000430328 PIM2Q9P1W9 311 aa16.42■□□□□ 0.22
RIF1-204ENST00000430328 CCDC163A0A0D9SF12 145 aa16.42■□□□□ 0.22
RIF1-204ENST00000430328 BBIP1A8MTZ0 92 aa16.42■□□□□ 0.22
RIF1-204ENST00000430328 APLP1P51693 650 aa16.42■□□□□ 0.22
RIF1-204ENST00000430328 ZNF267Q14586 743 aaPredicted RBP16.42■□□□□ 0.22
RIF1-204ENST00000430328 SLC9B1Q4ZJI4 515 aa16.42■□□□□ 0.22
RIF1-204ENST00000430328 DENND1CQ8IV53 801 aa16.42■□□□□ 0.22
RIF1-204ENST00000430328 IL1RAPQ9NPH3 570 aa16.42■□□□□ 0.22
RIF1-204ENST00000430328 ADIGQ0VDE8 80 aa16.42■□□□□ 0.22
RIF1-204ENST00000430328 ATAD3CQ5T2N8 411 aa16.42■□□□□ 0.22
RIF1-204ENST00000430328 ATG10Q9H0Y0 220 aa16.42■□□□□ 0.22
RIF1-204ENST00000430328 C14orf166Q9Y224 244 aaKnown RBP16.42■□□□□ 0.22
RIF1-204ENST00000430328 EFCAB9A8MZ26 197 aa16.42■□□□□ 0.22
RIF1-204ENST00000430328 SNX3O60493 162 aa16.42■□□□□ 0.22
RIF1-204ENST00000430328 SPATA22Q8NHS9 363 aa16.42■□□□□ 0.22
RIF1-204ENST00000430328 MRPL9Q9BYD2 267 aaKnown RBP16.42■□□□□ 0.22
RIF1-204ENST00000430328 TAS2R3Q9NYW6 316 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms