RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 HERC3Q15034 1050 aa18.74■□□□□ 0.59
USP49-202ENST00000373010 USP41Q3LFD5 358 aa18.74■□□□□ 0.59
USP49-202ENST00000373010 CLEC6AQ6EIG7 209 aa18.74■□□□□ 0.59
USP49-202ENST00000373010 DEFB128Q7Z7B8 93 aa18.74■□□□□ 0.59
USP49-202ENST00000373010 SLAIN1Q8ND83 568 aa18.74■□□□□ 0.59
USP49-202ENST00000373010 USP13Q92995 863 aaPredicted RBP18.74■□□□□ 0.59
USP49-202ENST00000373010 TCAF2A6NFQ2 919 aa18.74■□□□□ 0.59
USP49-202ENST00000373010 STX16-NPEPL1H3BU86 382 aa18.74■□□□□ 0.59
USP49-202ENST00000373010 CBX4O00257 560 aa18.74■□□□□ 0.59
USP49-202ENST00000373010 PITPNM1O00562 1244 aa18.74■□□□□ 0.59
USP49-202ENST00000373010 SCAMP3O14828 347 aaKnown RBP18.74■□□□□ 0.59
USP49-202ENST00000373010 PMLP29590 882 aa18.74■□□□□ 0.59
USP49-202ENST00000373010 SLC26A3P40879 764 aa18.74■□□□□ 0.59
USP49-202ENST00000373010 DPP6P42658 865 aa18.74■□□□□ 0.59
USP49-202ENST00000373010 TUFMP49411 452 aaKnown RBP18.74■□□□□ 0.59
USP49-202ENST00000373010 ALDH7A1P49419 539 aaKnown RBP18.74■□□□□ 0.59
USP49-202ENST00000373010 STC1P52823 247 aa18.74■□□□□ 0.59
USP49-202ENST00000373010 THOP1P52888 689 aa18.74■□□□□ 0.59
USP49-202ENST00000373010 LRRC36Q1X8D7 754 aa18.74■□□□□ 0.59
USP49-202ENST00000373010 UNC50Q53HI1 259 aa18.74■□□□□ 0.59
USP49-202ENST00000373010 ZNF678Q5SXM1 525 aa18.74■□□□□ 0.59
USP49-202ENST00000373010 BNC2Q6ZN30 1099 aaPredicted RBP18.74■□□□□ 0.59
USP49-202ENST00000373010 ADGRG6Q86SQ4 1221 aa18.74■□□□□ 0.59
USP49-202ENST00000373010 PEX13Q92968 403 aa18.74■□□□□ 0.59
USP49-202ENST00000373010 FAR2Q96K12 515 aa18.74■□□□□ 0.59
USP49-202ENST00000373010 ECSITQ9BQ95 431 aa18.74■□□□□ 0.59
USP49-202ENST00000373010 RNF38Q9H0F5 515 aa18.74■□□□□ 0.59
USP49-202ENST00000373010 MEAF6Q9HAF1 191 aa18.74■□□□□ 0.59
USP49-202ENST00000373010 PRPF19Q9UMS4 504 aaKnown RBP18.74■□□□□ 0.59
USP49-202ENST00000373010 CCDC189A1A4V9 331 aa18.73■□□□□ 0.59
USP49-202ENST00000373010 INSIG1O15503 277 aa18.73■□□□□ 0.59
USP49-202ENST00000373010 MT-CO1P00395 513 aa18.73■□□□□ 0.59
USP49-202ENST00000373010 RAG1P15918 1043 aa18.73■□□□□ 0.59
USP49-202ENST00000373010 ZNF140P52738 457 aaPredicted RBP18.73■□□□□ 0.59
USP49-202ENST00000373010 SATB1Q01826 763 aa18.73■□□□□ 0.59
USP49-202ENST00000373010 CYTH1Q15438 398 aa18.73■□□□□ 0.59
USP49-202ENST00000373010 OR4D1Q15615 310 aa18.73■□□□□ 0.59
USP49-202ENST00000373010 LPCAT4Q643R3 524 aa18.73■□□□□ 0.59
USP49-202ENST00000373010 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.73■□□□□ 0.59
USP49-202ENST00000373010 RNF148Q8N7C7 305 aa18.73■□□□□ 0.59
USP49-202ENST00000373010 PDZD8Q8NEN9 1154 aa18.73■□□□□ 0.59
USP49-202ENST00000373010 MDGA1Q8NFP4 955 aa18.73■□□□□ 0.59
USP49-202ENST00000373010 OR4K2Q8NGD2 314 aa18.73■□□□□ 0.59
USP49-202ENST00000373010 ZBED2Q9BTP6 218 aa18.73■□□□□ 0.59
USP49-202ENST00000373010 WDR41Q9HAD4 459 aa18.73■□□□□ 0.59
USP49-202ENST00000373010 STK39Q9UEW8 545 aa18.73■□□□□ 0.59
USP49-202ENST00000373010 TRAF6Q9Y4K3 522 aa18.73■□□□□ 0.59
USP49-202ENST00000373010 ANKRD36A6QL64 1941 aa18.73■□□□□ 0.59
USP49-202ENST00000373010 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.73■□□□□ 0.59
USP49-202ENST00000373010 UBA6A0AVT1 1052 aaPredicted RBP18.73■□□□□ 0.59
USP49-202ENST00000373010 C2orf78A6NCI8 922 aa18.73■□□□□ 0.59
USP49-202ENST00000373010 LRRC14BA6NHZ5 514 aa18.73■□□□□ 0.59
USP49-202ENST00000373010 H3BMM5 538 aa18.73■□□□□ 0.59
USP49-202ENST00000373010 KIF3CO14782 793 aa18.73■□□□□ 0.59
USP49-202ENST00000373010 CLDN11O75508 207 aa18.73■□□□□ 0.59
USP49-202ENST00000373010 PRLP01236 227 aa18.73■□□□□ 0.59
USP49-202ENST00000373010 CDH13P55290 713 aa18.73■□□□□ 0.59
USP49-202ENST00000373010 DSG1Q02413 1049 aa18.73■□□□□ 0.59
USP49-202ENST00000373010 CDC16Q13042 620 aa18.73■□□□□ 0.59
USP49-202ENST00000373010 ZNF177Q13360 481 aaPredicted RBP18.73■□□□□ 0.59
USP49-202ENST00000373010 IRGCQ6NXR0 463 aa18.73■□□□□ 0.59
USP49-202ENST00000373010 SDCCAG8Q86SQ7 713 aaPredicted RBP18.73■□□□□ 0.59
USP49-202ENST00000373010 HMGCLL1Q8TB92 370 aa18.73■□□□□ 0.59
USP49-202ENST00000373010 L3HYPDHQ96EM0 354 aa18.73■□□□□ 0.59
USP49-202ENST00000373010 CLSTN3Q9BQT9 956 aa18.73■□□□□ 0.59
USP49-202ENST00000373010 AARSD1Q9BTE6 412 aaKnown RBP18.73■□□□□ 0.59
USP49-202ENST00000373010 PPP1R12CQ9BZL4 782 aa18.73■□□□□ 0.59
USP49-202ENST00000373010 SCUBE2Q9NQ36 999 aa18.73■□□□□ 0.59
USP49-202ENST00000373010 NLE1Q9NVX2 485 aaPredicted RBP18.73■□□□□ 0.59
USP49-202ENST00000373010 GEMIN8Q9NWZ8 242 aaKnown RBP18.73■□□□□ 0.59
USP49-202ENST00000373010 AGO1Q9UL18 857 aaKnown RBP18.73■□□□□ 0.59
USP49-202ENST00000373010 PCDHGC4Q9Y5F7 938 aa18.73■□□□□ 0.59
USP49-202ENST00000373010 H3BNX3 289 aa18.72■□□□□ 0.59
USP49-202ENST00000373010 UBXN8O00124 270 aa18.72■□□□□ 0.59
USP49-202ENST00000373010 EFEMP2O95967 443 aa18.72■□□□□ 0.59
USP49-202ENST00000373010 ZNF37AP17032 561 aaPredicted RBP18.72■□□□□ 0.59
USP49-202ENST00000373010 XRCC1P18887 633 aaPredicted RBP18.72■□□□□ 0.59
USP49-202ENST00000373010 CR2P20023 1033 aa18.72■□□□□ 0.59
USP49-202ENST00000373010 OGNP20774 298 aaKnown RBP18.72■□□□□ 0.59
USP49-202ENST00000373010 PLD1Q13393 1074 aa18.72■□□□□ 0.59
USP49-202ENST00000373010 ART3Q13508 389 aa18.72■□□□□ 0.59
USP49-202ENST00000373010 CEACAM7Q14002 265 aa18.72■□□□□ 0.59
USP49-202ENST00000373010 PTPRRQ15256 657 aa18.72■□□□□ 0.59
USP49-202ENST00000373010 ZNF423Q2M1K9 1284 aa18.72■□□□□ 0.59
USP49-202ENST00000373010 KIAA1841Q6NSI8 718 aa18.72■□□□□ 0.59
USP49-202ENST00000373010 CHSY3Q70JA7 882 aa18.72■□□□□ 0.59
USP49-202ENST00000373010 GLT6D1Q7Z4J2 308 aa18.72■□□□□ 0.59
USP49-202ENST00000373010 KBTBD6Q86V97 674 aa18.72■□□□□ 0.59
USP49-202ENST00000373010 AFAP1L2Q8N4X5 818 aa18.72■□□□□ 0.59
USP49-202ENST00000373010 SNX31Q8N9S9 440 aa18.72■□□□□ 0.59
USP49-202ENST00000373010 LPCAT1Q8NF37 534 aa18.72■□□□□ 0.59
USP49-202ENST00000373010 CYP2S1Q96SQ9 504 aa18.72■□□□□ 0.59
USP49-202ENST00000373010 CFHR5Q9BXR6 569 aa18.72■□□□□ 0.59
USP49-202ENST00000373010 EFCAB1Q9HAE3 211 aa18.72■□□□□ 0.59
USP49-202ENST00000373010 GPBP1L1Q9HC44 474 aaPredicted RBP18.72■□□□□ 0.59
USP49-202ENST00000373010 SMIM24O75264 130 aa18.72■□□□□ 0.59
USP49-202ENST00000373010 SIX3O95343 332 aaPredicted RBP18.72■□□□□ 0.59
USP49-202ENST00000373010 CRTAMO95727 393 aa18.72■□□□□ 0.59
USP49-202ENST00000373010 FMO4P31512 558 aa18.72■□□□□ 0.59
USP49-202ENST00000373010 CDKN1CP49918 316 aaPredicted RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms