RNA–Protein interactions for RNA: YPR056W

TFB4, Transcript of Subunit of TFIIH complex, yeastyeast

Gene TFB4, Length 1,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB4YPR056W MAG2Q06436 670 aaKnown RBP7.56□□□□□ -1.2
TFB4YPR056W GLO4Q12320 285 aa7.56□□□□□ -1.2
TFB4YPR056W GLT1Q12680 2145 aaKnown RBP7.55□□□□□ -1.2
TFB4YPR056W TRL1P09880 827 aaKnown RBP7.55□□□□□ -1.2
TFB4YPR056W PYC2P32327 1180 aaKnown RBP7.55□□□□□ -1.2
TFB4YPR056W HIF1Q12373 385 aa7.55□□□□□ -1.2
TFB4YPR056W CIT2P08679 460 aa7.54□□□□□ -1.2
TFB4YPR056W YKL091CP33324 310 aaKnown RBP7.54□□□□□ -1.2
TFB4YPR056W POL5P39985 1022 aaKnown RBP7.54□□□□□ -1.2
TFB4YPR056W TRS120Q04183 1289 aa7.54□□□□□ -1.2
TFB4YPR056W YDL121CQ07541 149 aa7.54□□□□□ -1.2
TFB4YPR056W RPA135P22138 1203 aaKnown RBP7.53□□□□□ -1.2
TFB4YPR056W SEC8P32855 1065 aa7.53□□□□□ -1.2
TFB4YPR056W NOP2P40991 618 aaKnown RBP7.53□□□□□ -1.2
TFB4YPR056W YJR124CP47159 448 aa7.53□□□□□ -1.2
TFB4YPR056W YNR065CP53751 1116 aa7.53□□□□□ -1.2
TFB4YPR056W YHL050CP38721 697 aa7.52□□□□□ -1.21
TFB4YPR056W YHR219WP38900 624 aa7.52□□□□□ -1.21
TFB4YPR056W CTR9P89105 1077 aa7.52□□□□□ -1.21
TFB4YPR056W POB3Q04636 552 aaKnown RBP7.52□□□□□ -1.21
TFB4YPR056W COQ2P32378 372 aa7.51□□□□□ -1.21
TFB4YPR056W MAE1P36013 669 aaKnown RBP7.51□□□□□ -1.21
TFB4YPR056W VAC8P39968 578 aa7.51□□□□□ -1.21
TFB4YPR056W NRD1P53617 575 aaKnown RBP RIP-Chip data7.51□□□□□ -1.21 RIP-Chip
TFB4YPR056W YNL011CP53980 444 aa7.51□□□□□ -1.21
TFB4YPR056W NEO1P40527 1151 aa7.5□□□□□ -1.21
TFB4YPR056W FET4P40988 552 aa7.5□□□□□ -1.21
TFB4YPR056W IOC3P43596 787 aa7.5□□□□□ -1.21
TFB4YPR056W UBP3Q01477 912 aaKnown RBP RIP-Chip data7.5□□□□□ -1.21not detected
TFB4YPR056W HAS1Q03532 505 aaKnown RBP7.5□□□□□ -1.21
TFB4YPR056W ECM16Q04217 1267 aaKnown RBP7.5□□□□□ -1.21
TFB4YPR056W ELG1Q12050 791 aa7.5□□□□□ -1.21
TFB4YPR056W MNL2Q12205 849 aa7.5□□□□□ -1.21
TFB4YPR056W VMA4P22203 233 aaKnown RBP7.49□□□□□ -1.21
TFB4YPR056W GRX4P32642 244 aa7.49□□□□□ -1.21
TFB4YPR056W MPE1P35728 441 aaKnown RBP7.49□□□□□ -1.21
TFB4YPR056W ERP2P39704 215 aa7.49□□□□□ -1.21
TFB4YPR056W THI12P42883 340 aa7.49□□□□□ -1.21
TFB4YPR056W THI5P43534 340 aa7.49□□□□□ -1.21
TFB4YPR056W THI11P47183 340 aa7.49□□□□□ -1.21
TFB4YPR056W CDC55Q00362 526 aa7.49□□□□□ -1.21
TFB4YPR056W THI13Q07748 340 aa7.49□□□□□ -1.21
TFB4YPR056W REC8Q12188 680 aa7.49□□□□□ -1.21
TFB4YPR056W WHI5Q12416 295 aa7.49□□□□□ -1.21
TFB4YPR056W RAD2P07276 1031 aa7.48□□□□□ -1.21
TFB4YPR056W SAF1P38352 637 aa7.48□□□□□ -1.21
TFB4YPR056W PPX1P38698 397 aa7.48□□□□□ -1.21
TFB4YPR056W RPT2P40327 437 aaKnown RBP7.48□□□□□ -1.21
TFB4YPR056W MDJ2P42834 146 aa7.48□□□□□ -1.21
TFB4YPR056W GIR2Q03768 265 aaPredicted RBP7.48□□□□□ -1.21
TFB4YPR056W TMA64Q04600 565 aaKnown RBP7.48□□□□□ -1.21
TFB4YPR056W PRP5P21372 849 aaPredicted RBP7.47□□□□□ -1.21
TFB4YPR056W KAE1P36132 386 aa7.47□□□□□ -1.21
TFB4YPR056W NCE103P53615 221 aa7.47□□□□□ -1.21
TFB4YPR056W MSH6Q03834 1242 aa7.47□□□□□ -1.21
TFB4YPR056W ECM2P38241 364 aaKnown RBP7.46□□□□□ -1.22
TFB4YPR056W RIM11P38615 370 aa7.46□□□□□ -1.22
TFB4YPR056W BSC2Q05611 235 aa7.46□□□□□ -1.22
TFB4YPR056W YLR122CQ12312 125 aa7.46□□□□□ -1.22
TFB4YPR056W COBP00163 385 aa7.45□□□□□ -1.22
TFB4YPR056W KAR1P11927 433 aa7.45□□□□□ -1.22
TFB4YPR056W GRS1P38088 690 aaKnown RBP7.45□□□□□ -1.22
TFB4YPR056W NPR1P22211 790 aa7.44□□□□□ -1.22
TFB4YPR056W MGE1P38523 228 aa7.44□□□□□ -1.22
TFB4YPR056W SAP155P43612 1002 aa7.44□□□□□ -1.22
TFB4YPR056W INP52P50942 1183 aa7.44□□□□□ -1.22
TFB4YPR056W YGL081WP53156 320 aa7.44□□□□□ -1.22
TFB4YPR056W ALD6P54115 500 aaKnown RBP7.44□□□□□ -1.22
TFB4YPR056W YLL054CQ12244 843 aa7.44□□□□□ -1.22
TFB4YPR056W YGR161W-CQ3E744 92 aa7.44□□□□□ -1.22
TFB4YPR056W CHS2P14180 963 aa7.43□□□□□ -1.22
TFB4YPR056W SSD1P24276 1250 aaKnown RBP RIP-Chip data7.43□□□□□ -1.22not detected
TFB4YPR056W GRX7P38068 203 aa7.43□□□□□ -1.22
TFB4YPR056W NOC2P39744 710 aaKnown RBP7.43□□□□□ -1.22
TFB4YPR056W YJR107WP47145 328 aa7.43□□□□□ -1.22
TFB4YPR056W ALO1P54783 526 aaKnown RBP7.43□□□□□ -1.22
TFB4YPR056W DNM1P54861 757 aa7.43□□□□□ -1.22
TFB4YPR056W RPN4Q03465 531 aa7.43□□□□□ -1.22
TFB4YPR056W NSE3Q05541 303 aa7.43□□□□□ -1.22
TFB4YPR056W PUF3Q07807 879 aaKnown RBP RIP-Chip data7.43□□□□□ -1.22not detected
TFB4YPR056W MED7Q08278 222 aa7.43□□□□□ -1.22
TFB4YPR056W CMR1Q12510 522 aaKnown RBP7.43□□□□□ -1.22
TFB4YPR056W FLP1P03870 423 aa7.42□□□□□ -1.22
TFB4YPR056W ERS1P17261 260 aa7.42□□□□□ -1.22
TFB4YPR056W MAC1P35192 417 aa7.42□□□□□ -1.22
TFB4YPR056W VPS27P40343 622 aaKnown RBP7.42□□□□□ -1.22
TFB4YPR056W GCV1P48015 400 aa7.42□□□□□ -1.22
TFB4YPR056W YIG1Q08956 461 aa7.42□□□□□ -1.22
TFB4YPR056W SEC6P32844 805 aa7.41□□□□□ -1.22
TFB4YPR056W RPS0AP32905 252 aaKnown RBP7.41□□□□□ -1.22
TFB4YPR056W DUR3P33413 735 aa7.41□□□□□ -1.22
TFB4YPR056W OMA1P36163 345 aa7.41□□□□□ -1.22
TFB4YPR056W YHL008CP38750 627 aa7.41□□□□□ -1.22
TFB4YPR056W CEF1Q03654 590 aaPredicted RBP7.41□□□□□ -1.22
TFB4YPR056W NUT2Q06213 157 aa7.41□□□□□ -1.22
TFB4YPR056W MFT1P33441 392 aaKnown RBP7.4□□□□□ -1.22
TFB4YPR056W AKR1P39010 764 aa7.4□□□□□ -1.22
TFB4YPR056W YJR142WP47173 342 aa7.4□□□□□ -1.22
TFB4YPR056W CWC22P53333 577 aaKnown RBP7.4□□□□□ -1.22
TFB4YPR056W YOR223WQ12015 292 aa7.4□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms