RNA–Protein interactions for RNA: YNR007C

ATG3, Transcript of E2-like enzyme, yeast

Gene ATG3, Length 933 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG3	YNR007C	CIT3	P43635	486 aa		5.14	□□□□□ -1.59
ATG3	YNR007C	MEC3	Q02574	474 aa		5.14	□□□□□ -1.59
ATG3	YNR007C	YOR059C	Q08448	450 aa	Known RBP	5.14	□□□□□ -1.59
ATG3	YNR007C	NSI1	Q12457	570 aa		5.14	□□□□□ -1.59
ATG3	YNR007C	FLP1	P03870	423 aa		5.13	□□□□□ -1.59
ATG3	YNR007C	CDC3	P32457	520 aa	Known RBP	5.13	□□□□□ -1.59
ATG3	YNR007C	YHL008C	P38750	627 aa		5.13	□□□□□ -1.59
ATG3	YNR007C	SAP155	P43612	1002 aa		5.13	□□□□□ -1.59
ATG3	YNR007C	UTP22	P53254	1237 aa	Predicted RBP	5.13	□□□□□ -1.59
ATG3	YNR007C	SDH1	Q00711	640 aa		5.13	□□□□□ -1.59
ATG3	YNR007C	GCD1	P09032	578 aa	Predicted RBP	5.12	□□□□□ -1.59
ATG3	YNR007C	WHI3	P34761	661 aa	Known RBP	5.12	□□□□□ -1.59
ATG3	YNR007C	SEA4	P38164	1038 aa		5.11	□□□□□ -1.59
ATG3	YNR007C	NUT1	P53114	1132 aa		5.11	□□□□□ -1.59
ATG3	YNR007C	RCM1	P53972	490 aa		5.11	□□□□□ -1.59
ATG3	YNR007C	PMT7	Q06644	662 aa		5.11	□□□□□ -1.59
ATG3	YNR007C	GRS1	P38088	690 aa	Known RBP	5.1	□□□□□ -1.59
ATG3	YNR007C	REI1	P38344	393 aa	Predicted RBP	5.1	□□□□□ -1.59
ATG3	YNR007C	IRC20	Q06554	1556 aa		5.09	□□□□□ -1.59
ATG3	YNR007C	RPS4A	P0CX35	261 aa	Known RBP	5.09	□□□□□ -1.59
ATG3	YNR007C	RPS4B	P0CX36	261 aa	Known RBP	5.09	□□□□□ -1.59
ATG3	YNR007C	ERP5	P38819	212 aa		5.09	□□□□□ -1.59
ATG3	YNR007C	RVS167	P39743	482 aa	Known RBP	5.09	□□□□□ -1.59
ATG3	YNR007C	MDJ2	P42834	146 aa		5.09	□□□□□ -1.59
ATG3	YNR007C	YAF9	P53930	226 aa		5.09	□□□□□ -1.59
ATG3	YNR007C	INP54	Q08227	384 aa	Known RBP	5.09	□□□□□ -1.59
ATG3	YNR007C	LRG1	P35688	1017 aa		5.08	□□□□□ -1.6
ATG3	YNR007C	GEF1	P37020	779 aa		5.08	□□□□□ -1.6
ATG3	YNR007C	ARL1	P38116	183 aa	Known RBP	5.08	□□□□□ -1.6
ATG3	YNR007C	MSH4	P40965	878 aa	Predicted RBP	5.08	□□□□□ -1.6
ATG3	YNR007C	ECL1	P48235	211 aa		5.08	□□□□□ -1.6
ATG3	YNR007C	ALG6	Q12001	544 aa	Known RBP	5.08	□□□□□ -1.6
ATG3	YNR007C	YBL113C	Q7M4S9	792 aa		5.08	□□□□□ -1.6
ATG3	YNR007C	MDS3	P53094	1487 aa		5.07	□□□□□ -1.6
ATG3	YNR007C	MCM5	P29496	775 aa	Known RBP	5.07	□□□□□ -1.6
ATG3	YNR007C	POL12	P38121	705 aa	Predicted RBP	5.07	□□□□□ -1.6
ATG3	YNR007C	OYE3	P41816	400 aa	Predicted RBP	5.07	□□□□□ -1.6
ATG3	YNR007C	ALT1	P52893	592 aa		5.07	□□□□□ -1.6
ATG3	YNR007C	NOC3	Q07896	663 aa	Predicted RBP	5.07	□□□□□ -1.6
ATG3	YNR007C	HAT1	Q12341	374 aa		5.07	□□□□□ -1.6
ATG3	YNR007C	DFG16	Q99234	619 aa		5.07	□□□□□ -1.6
ATG3	YNR007C	FRT1	Q99332	602 aa		5.07	□□□□□ -1.6
ATG3	YNR007C	SPT6	P23615	1451 aa	Known RBP	5.07	□□□□□ -1.6
ATG3	YNR007C	SEG2	P34250	1132 aa		5.06	□□□□□ -1.6
ATG3	YNR007C	SAM37	P50110	327 aa		5.06	□□□□□ -1.6
ATG3	YNR007C	NUT2	Q06213	157 aa		5.06	□□□□□ -1.6
ATG3	YNR007C	GPI13	Q07830	1017 aa		5.06	□□□□□ -1.6
ATG3	YNR007C	RNQ1	P25367	405 aa		5.05	□□□□□ -1.6
ATG3	YNR007C	YKL077W	P36081	392 aa		5.05	□□□□□ -1.6
ATG3	YNR007C	UBP5	P39944	805 aa		5.05	□□□□□ -1.6
ATG3	YNR007C	MON1	P53129	644 aa		5.05	□□□□□ -1.6
ATG3	YNR007C	YGR045C	P53229	120 aa		5.05	□□□□□ -1.6
ATG3	YNR007C	AVO1	Q08236	1176 aa		5.05	□□□□□ -1.6
ATG3	YNR007C	TY1A-LR4	P0C2I8	440 aa	Known RBP	5.04	□□□□□ -1.6
ATG3	YNR007C	TY1A-DR6	P0CX70	440 aa		5.04	□□□□□ -1.6
ATG3	YNR007C	TY1A-ER1	P0CX71	440 aa		5.04	□□□□□ -1.6
ATG3	YNR007C	TY1A-LR2	P0CX72	440 aa		5.04	□□□□□ -1.6
ATG3	YNR007C	TY1A-PL	P0CX73	440 aa		5.04	□□□□□ -1.6
ATG3	YNR007C	TY1A-JR1	P0CX74	440 aa		5.04	□□□□□ -1.6
ATG3	YNR007C	TY1A-LR3	P0CX75	440 aa		5.04	□□□□□ -1.6
ATG3	YNR007C	TY1A-ML2	P0CX76	440 aa		5.04	□□□□□ -1.6
ATG3	YNR007C	ADP1	P25371	1049 aa		5.04	□□□□□ -1.6
ATG3	YNR007C	NFS1	P25374	497 aa		5.04	□□□□□ -1.6
ATG3	YNR007C	SMY2	P32909	740 aa	Known RBP	5.04	□□□□□ -1.6
ATG3	YNR007C	HSP78	P33416	811 aa		5.04	□□□□□ -1.6
ATG3	YNR007C	NNK1	P36003	928 aa		5.04	□□□□□ -1.6
ATG3	YNR007C	SHU2	P38957	223 aa		5.04	□□□□□ -1.6
ATG3	YNR007C	NIT1	P40447	199 aa		5.04	□□□□□ -1.6
ATG3	YNR007C	ELA1	P53861	379 aa	Predicted RBP	5.04	□□□□□ -1.6
ATG3	YNR007C	EAR1	Q03212	550 aa		5.04	□□□□□ -1.6
ATG3	YNR007C	TY1A-GR1	Q12085	440 aa		5.04	□□□□□ -1.6
ATG3	YNR007C	YVC1	Q12324	675 aa		5.04	□□□□□ -1.6
ATG3	YNR007C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	5.04	□□□□□ -1.6
ATG3	YNR007C	TY1A-OL	Q92392	440 aa	Known RBP	5.04	□□□□□ -1.6
ATG3	YNR007C	HSL1	P34244	1518 aa		5.03	□□□□□ -1.6
ATG3	YNR007C	CIC1	P38779	376 aa	Known RBP	5.03	□□□□□ -1.6
ATG3	YNR007C	YCS4	Q06156	1176 aa		5.03	□□□□□ -1.6
ATG3	YNR007C	TRE1	Q08919	783 aa		5.03	□□□□□ -1.6
ATG3	YNR007C	EXO5	P38289	585 aa		5.02	□□□□□ -1.61
ATG3	YNR007C	ORC3	P54790	616 aa		5.02	□□□□□ -1.61
ATG3	YNR007C	PEX7	P39108	375 aa		5.01	□□□□□ -1.61
ATG3	YNR007C	PRP43	P53131	767 aa	Known RBP	5.01	□□□□□ -1.61
ATG3	YNR007C	NOG1	Q02892	647 aa	Known RBP	5.01	□□□□□ -1.61
ATG3	YNR007C	SSY1	Q03770	852 aa		5.01	□□□□□ -1.61
ATG3	YNR007C	SLS1	P42900	643 aa		5	□□□□□ -1.61
ATG3	YNR007C	MYO2	P19524	1574 aa	Known RBP	4.99	□□□□□ -1.61
ATG3	YNR007C	GAS1	P22146	559 aa	Known RBP	4.99	□□□□□ -1.61
ATG3	YNR007C	NEM1	P38757	446 aa		4.99	□□□□□ -1.61
ATG3	YNR007C	PRO1	P32264	428 aa		4.98	□□□□□ -1.61
ATG3	YNR007C	GCD6	P32501	712 aa	Known RBP	4.98	□□□□□ -1.61
ATG3	YNR007C	YAR028W	P39548	234 aa		4.98	□□□□□ -1.61
ATG3	YNR007C	MTR4	P47047	1073 aa	Known RBP	4.98	□□□□□ -1.61
ATG3	YNR007C	PUS7	Q08647	676 aa	Known RBP	4.98	□□□□□ -1.61
ATG3	YNR007C	BPT1	P14772	1559 aa		4.98	□□□□□ -1.61
ATG3	YNR007C	DNF1	P32660	1571 aa		4.98	□□□□□ -1.61
ATG3	YNR007C	PEP1	P32319	1579 aa		4.97	□□□□□ -1.61
ATG3	YNR007C	VPS35	P34110	944 aa		4.97	□□□□□ -1.61
ATG3	YNR007C	YHL050C	P38721	697 aa		4.97	□□□□□ -1.61
ATG3	YNR007C	YHR219W	P38900	624 aa		4.97	□□□□□ -1.61
ATG3	YNR007C	LPX1	Q12405	387 aa	Known RBP	4.97	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms