RNA–Protein interactions for RNA: YNL049C

SFB2, Transcript of Component of the Sec23p-Sfb2p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB2, Length 2,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB2YNL049C YKL133CP36066 463 aa2.38□□□□□ -2.03
SFB2YNL049C SHC1P39000 512 aa2.38□□□□□ -2.03
SFB2YNL049C DFG5Q05031 458 aa2.38□□□□□ -2.03
SFB2YNL049C WTM2Q12206 467 aa2.38□□□□□ -2.03
SFB2YNL049C YLR278CQ05854 1341 aa2.38□□□□□ -2.03
SFB2YNL049C YRF1-4O13559 1382 aa2.38□□□□□ -2.03
SFB2YNL049C MRT4P33201 236 aaKnown RBP2.38□□□□□ -2.03
SFB2YNL049C KTR2P33550 425 aa2.38□□□□□ -2.03
SFB2YNL049C CHZ1P40019 153 aaPredicted RBP2.38□□□□□ -2.03
SFB2YNL049C YJR107WP47145 328 aa2.38□□□□□ -2.03
SFB2YNL049C TRS120Q04183 1289 aa2.38□□□□□ -2.03
SFB2YNL049C STE6P12866 1290 aa2.38□□□□□ -2.03
SFB2YNL049C HXT5P38695 592 aa2.38□□□□□ -2.03
SFB2YNL049C UTP7P40055 554 aaKnown RBP2.38□□□□□ -2.03
SFB2YNL049C YFR016CP43597 1233 aaKnown RBP2.38□□□□□ -2.03
SFB2YNL049C MSB3P48566 633 aaPredicted RBP2.38□□□□□ -2.03
SFB2YNL049C NCS6P53088 359 aa2.38□□□□□ -2.03
SFB2YNL049C YPQ2Q06328 317 aa2.38□□□□□ -2.03
SFB2YNL049C APC11Q12157 165 aa2.38□□□□□ -2.03
SFB2YNL049C MNL2Q12205 849 aa2.38□□□□□ -2.03
SFB2YNL049C AIM44Q99299 758 aa2.38□□□□□ -2.03
SFB2YNL049C MET1P36150 593 aa2.37□□□□□ -2.03
SFB2YNL049C TBS1P38114 1094 aa2.37□□□□□ -2.03
SFB2YNL049C BSD2P38356 321 aa2.37□□□□□ -2.03
SFB2YNL049C FYV10P40492 516 aa2.37□□□□□ -2.03
SFB2YNL049C ERO1Q03103 563 aa2.37□□□□□ -2.03
SFB2YNL049C GRX6Q12438 231 aa2.37□□□□□ -2.03
SFB2YNL049C TIF6Q12522 245 aaKnown RBP2.37□□□□□ -2.03
SFB2YNL049C SPR3P41901 512 aa2.37□□□□□ -2.03
SFB2YNL049C YLL067CQ07888 1374 aa2.36□□□□□ -2.03
SFB2YNL049C COBP00163 385 aa2.36□□□□□ -2.03
SFB2YNL049C PHO4P07270 312 aaKnown RBP2.36□□□□□ -2.03
SFB2YNL049C MCM2P29469 868 aa2.36□□□□□ -2.03
SFB2YNL049C ENP1P38333 483 aaKnown RBP2.36□□□□□ -2.03
SFB2YNL049C MGE1P38523 228 aa2.36□□□□□ -2.03
SFB2YNL049C MSN5P52918 1224 aa2.36□□□□□ -2.03
SFB2YNL049C SUT1P53032 299 aaKnown RBP2.36□□□□□ -2.03
SFB2YNL049C SEC3P33332 1336 aaKnown RBP2.36□□□□□ -2.03
SFB2YNL049C LEU2P04173 364 aaPredicted RBP2.36□□□□□ -2.03
SFB2YNL049C MRPL33P20084 86 aa2.36□□□□□ -2.03
SFB2YNL049C BDS1Q08347 646 aa2.36□□□□□ -2.03
SFB2YNL049C MCM1P11746 286 aa2.35□□□□□ -2.03
SFB2YNL049C WHI3P34761 661 aaKnown RBP2.35□□□□□ -2.03
SFB2YNL049C XKS1P42826 600 aa2.35□□□□□ -2.03
SFB2YNL049C SUM1P46676 1062 aa2.35□□□□□ -2.03
SFB2YNL049C YNL165WP53891 406 aa2.35□□□□□ -2.03
SFB2YNL049C SPR28Q04921 423 aa2.35□□□□□ -2.03
SFB2YNL049C JIP5Q06214 492 aaPredicted RBP2.35□□□□□ -2.03
SFB2YNL049C GRX4P32642 244 aa2.35□□□□□ -2.03
SFB2YNL049C RPT1P33299 467 aaKnown RBP2.35□□□□□ -2.03
SFB2YNL049C OCA5P38738 679 aa2.35□□□□□ -2.03
SFB2YNL049C DAK2P43550 591 aa2.35□□□□□ -2.03
SFB2YNL049C UFD2P54860 961 aa2.35□□□□□ -2.03
SFB2YNL049C KIN4Q01919 800 aa2.35□□□□□ -2.03
SFB2YNL049C SVF1Q05515 481 aa2.35□□□□□ -2.03
SFB2YNL049C MAG2Q06436 670 aaKnown RBP2.35□□□□□ -2.03
SFB2YNL049C RPO41P13433 1351 aaKnown RBP2.34□□□□□ -2.03
SFB2YNL049C SSM4P40318 1319 aa2.34□□□□□ -2.03
SFB2YNL049C VMA3P25515 160 aa2.34□□□□□ -2.03
SFB2YNL049C HED1Q03937 162 aa2.34□□□□□ -2.03
SFB2YNL049C UBX2Q04228 584 aa2.34□□□□□ -2.03
SFB2YNL049C TAP42Q04372 366 aa2.34□□□□□ -2.03
SFB2YNL049C TOS4Q06266 489 aa2.34□□□□□ -2.03
SFB2YNL049C MET32Q12041 191 aa2.34□□□□□ -2.03
SFB2YNL049C RPP2BP02400 110 aaKnown RBP2.34□□□□□ -2.04
SFB2YNL049C RET1P22276 1149 aaKnown RBP2.34□□□□□ -2.04
SFB2YNL049C SCD5P34758 872 aa2.34□□□□□ -2.04
SFB2YNL049C DLD3P39976 496 aaKnown RBP2.34□□□□□ -2.04
SFB2YNL049C RRT6P53117 311 aaPredicted RBP2.34□□□□□ -2.04
SFB2YNL049C IOC4Q04213 475 aa2.34□□□□□ -2.04
SFB2YNL049C Q0182Q9ZZW1 134 aa2.34□□□□□ -2.04
SFB2YNL049C HVG1P0CE11 249 aa2.33□□□□□ -2.04
SFB2YNL049C TRK2P28584 889 aa2.33□□□□□ -2.04
SFB2YNL049C ASH1P34233 588 aa2.33□□□□□ -2.04
SFB2YNL049C HXT8P40886 569 aa2.33□□□□□ -2.04
SFB2YNL049C YFL040WP43562 540 aa2.33□□□□□ -2.04
SFB2YNL049C CAF120P53836 1060 aa2.33□□□□□ -2.04
SFB2YNL049C YNL011CP53980 444 aa2.33□□□□□ -2.04
SFB2YNL049C CDC55Q00362 526 aa2.33□□□□□ -2.04
SFB2YNL049C RAT1Q02792 1006 aaKnown RBP2.33□□□□□ -2.04
SFB2YNL049C MLF3P32047 452 aa2.33□□□□□ -2.04
SFB2YNL049C MOT2P34909 587 aaKnown RBP2.33□□□□□ -2.04
SFB2YNL049C SHM1P37292 490 aaPredicted RBP2.33□□□□□ -2.04
SFB2YNL049C SSN3P39073 555 aa2.33□□□□□ -2.04
SFB2YNL049C RPS26AP39938 119 aaKnown RBP2.33□□□□□ -2.04
SFB2YNL049C RPS26BP39939 119 aaKnown RBP2.33□□□□□ -2.04
SFB2YNL049C EAF6P47128 113 aa2.33□□□□□ -2.04
SFB2YNL049C FMP30Q02883 468 aa2.33□□□□□ -2.04
SFB2YNL049C ADR1P07248 1323 aa2.32□□□□□ -2.04
SFB2YNL049C RPS31P05759 152 aaKnown RBP2.32□□□□□ -2.04
SFB2YNL049C PPH3P32345 308 aa2.32□□□□□ -2.04
SFB2YNL049C YIL089WP40500 205 aa2.32□□□□□ -2.04
SFB2YNL049C RSC4Q02206 625 aa2.32□□□□□ -2.04
SFB2YNL049C TIM50Q02776 476 aa2.32□□□□□ -2.04
SFB2YNL049C MSN1P22148 382 aa2.32□□□□□ -2.04
SFB2YNL049C GCD6P32501 712 aaKnown RBP2.32□□□□□ -2.04
SFB2YNL049C SMC1P32908 1225 aa2.32□□□□□ -2.04
SFB2YNL049C VPS35P34110 944 aa2.32□□□□□ -2.04
SFB2YNL049C LDH1P38139 375 aa2.32□□□□□ -2.04
SFB2YNL049C QDR2P40474 542 aa2.32□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms