RNA–Protein interactions for RNA: YMR288W

HSH155, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH155, Length 2,916 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH155YMR288W YML020WQ03722 664 aa2.76□□□□□ -1.97
HSH155YMR288W VMA3P25515 160 aa2.76□□□□□ -1.97
HSH155YMR288W MRPL16P38064 232 aa2.76□□□□□ -1.97
HSH155YMR288W HXT5P38695 592 aa2.76□□□□□ -1.97
HSH155YMR288W CAB1Q04430 367 aa2.76□□□□□ -1.97
HSH155YMR288W SUV3P32580 737 aa2.75□□□□□ -1.97
HSH155YMR288W SSF1P38789 453 aaPredicted RBP2.75□□□□□ -1.97
HSH155YMR288W NPR2P39923 615 aa2.75□□□□□ -1.97
HSH155YMR288W DUS1P53759 423 aaKnown RBP2.75□□□□□ -1.97
HSH155YMR288W PSH1Q12161 406 aa2.75□□□□□ -1.97
HSH155YMR288W LSO1Q3E827 93 aa2.75□□□□□ -1.97
HSH155YMR288W SLA1P32790 1244 aa2.75□□□□□ -1.97
HSH155YMR288W TPS3P38426 1054 aaKnown RBP2.75□□□□□ -1.97
HSH155YMR288W ERP5P38819 212 aa2.75□□□□□ -1.97
HSH155YMR288W HXT8P40886 569 aa2.75□□□□□ -1.97
HSH155YMR288W ACF4P47129 309 aa2.75□□□□□ -1.97
HSH155YMR288W RIA1P53893 1110 aa2.75□□□□□ -1.97
HSH155YMR288W UFD2P54860 961 aa2.75□□□□□ -1.97
HSH155YMR288W LEU1P07264 779 aaKnown RBP2.75□□□□□ -1.97
HSH155YMR288W RGP1P16664 663 aa2.75□□□□□ -1.97
HSH155YMR288W NAB2P32505 525 aaKnown RBP RIP-Chip data2.75□□□□□ -1.97not detected
HSH155YMR288W SHM1P37292 490 aaPredicted RBP2.75□□□□□ -1.97
HSH155YMR288W PAM1P37304 830 aaKnown RBP2.75□□□□□ -1.97
HSH155YMR288W MCX1P38323 520 aaPredicted RBP2.75□□□□□ -1.97
HSH155YMR288W SKN7P38889 622 aa2.75□□□□□ -1.97
HSH155YMR288W BOL3P39724 118 aa2.75□□□□□ -1.97
HSH155YMR288W EAF6P47128 113 aa2.75□□□□□ -1.97
HSH155YMR288W ALD2P47771 506 aa2.75□□□□□ -1.97
HSH155YMR288W SQS1P53866 767 aaKnown RBP2.75□□□□□ -1.97
HSH155YMR288W ISW1P38144 1129 aa2.74□□□□□ -1.97
HSH155YMR288W YNL165WP53891 406 aa2.74□□□□□ -1.97
HSH155YMR288W RSC2Q06488 889 aa2.74□□□□□ -1.97
HSH155YMR288W GIP1P38229 639 aa2.74□□□□□ -1.97
HSH155YMR288W RAD55P38953 406 aa2.74□□□□□ -1.97
HSH155YMR288W TY1A-DR3Q12441 440 aa2.74□□□□□ -1.97
HSH155YMR288W DOT5P40553 215 aa2.73□□□□□ -1.97
HSH155YMR288W HEH2Q03281 663 aa2.73□□□□□ -1.97
HSH155YMR288W TY3B-IQ7LHG5 1498 aaKnown RBP2.73□□□□□ -1.97
HSH155YMR288W RPS31P05759 152 aaKnown RBP2.73□□□□□ -1.97
HSH155YMR288W CUS1Q02554 436 aaPredicted RBP2.73□□□□□ -1.97
HSH155YMR288W GPM1P00950 247 aaKnown RBP2.72□□□□□ -1.97
HSH155YMR288W YHL050CP38721 697 aa2.72□□□□□ -1.97
HSH155YMR288W AIM46P38885 310 aa2.72□□□□□ -1.97
HSH155YMR288W YHR219WP38900 624 aa2.72□□□□□ -1.97
HSH155YMR288W YOR296WQ08748 1289 aa2.72□□□□□ -1.97
HSH155YMR288W RPB10P22139 70 aa2.72□□□□□ -1.97
HSH155YMR288W APM2P38700 605 aa2.72□□□□□ -1.97
HSH155YMR288W LSB6P42951 607 aa2.72□□□□□ -1.97
HSH155YMR288W YNR029CP53729 429 aaKnown RBP2.72□□□□□ -1.97
HSH155YMR288W TRS120Q04183 1289 aa2.72□□□□□ -1.97
HSH155YMR288W PRP45P28004 379 aaPredicted RBP2.71□□□□□ -1.98
HSH155YMR288W ASF1P32447 279 aa2.71□□□□□ -1.98
HSH155YMR288W IRS4P36115 615 aaKnown RBP2.71□□□□□ -1.98
HSH155YMR288W BOI1P38041 980 aaKnown RBP2.71□□□□□ -1.98
HSH155YMR288W TY4B-HP0C2J7 1802 aa2.71□□□□□ -1.98
HSH155YMR288W TY4B-JP47024 1803 aa2.71□□□□□ -1.98
HSH155YMR288W YLR278CQ05854 1341 aa2.71□□□□□ -1.98
HSH155YMR288W SNF2P22082 1703 aa2.71□□□□□ -1.98
HSH155YMR288W MSN1P22148 382 aa2.71□□□□□ -1.98
HSH155YMR288W HEM3P28789 327 aa2.71□□□□□ -1.98
HSH155YMR288W BSD2P38356 321 aa2.71□□□□□ -1.98
HSH155YMR288W YJL181WP46987 611 aa2.71□□□□□ -1.98
HSH155YMR288W SAM37P50110 327 aa2.71□□□□□ -1.98
HSH155YMR288W MSC6Q08818 692 aaKnown RBP2.71□□□□□ -1.98
HSH155YMR288W GCD6P32501 712 aaKnown RBP2.7□□□□□ -1.98
HSH155YMR288W MAL31P38156 614 aa2.7□□□□□ -1.98
HSH155YMR288W MGE1P38523 228 aa2.7□□□□□ -1.98
HSH155YMR288W CIC1P38779 376 aaKnown RBP2.7□□□□□ -1.98
HSH155YMR288W NTA1P40354 457 aa2.7□□□□□ -1.98
HSH155YMR288W NUT2Q06213 157 aa2.7□□□□□ -1.98
HSH155YMR288W OXR1Q08952 273 aa2.7□□□□□ -1.98
HSH155YMR288W APC11Q12157 165 aa2.7□□□□□ -1.98
HSH155YMR288W YDR215CQ12240 137 aa2.7□□□□□ -1.98
HSH155YMR288W AMN1P38285 549 aaPredicted RBP2.7□□□□□ -1.98
HSH155YMR288W YHL008CP38750 627 aa2.7□□□□□ -1.98
HSH155YMR288W MDJ2P42834 146 aa2.7□□□□□ -1.98
HSH155YMR288W SKP1P52286 194 aa2.7□□□□□ -1.98
HSH155YMR288W YNL011CP53980 444 aa2.7□□□□□ -1.98
HSH155YMR288W PSY2P40164 858 aa2.69□□□□□ -1.98
HSH155YMR288W TRL1P09880 827 aaKnown RBP2.69□□□□□ -1.98
HSH155YMR288W RPC31P17890 251 aa2.69□□□□□ -1.98
HSH155YMR288W KNS1P32350 737 aaPredicted RBP2.69□□□□□ -1.98
HSH155YMR288W PPX1P38698 397 aa2.69□□□□□ -1.98
HSH155YMR288W SLN1P39928 1220 aaPredicted RBP2.69□□□□□ -1.98
HSH155YMR288W NOC3Q07896 663 aaPredicted RBP2.69□□□□□ -1.98
HSH155YMR288W MCA1Q08601 432 aa2.69□□□□□ -1.98
HSH155YMR288W YLL066CQ99208 1374 aa2.69□□□□□ -1.98
HSH155YMR288W PPT1P53043 513 aa2.69□□□□□ -1.98
HSH155YMR288W BSC2Q05611 235 aa2.69□□□□□ -1.98
HSH155YMR288W OMA1P36163 345 aa2.68□□□□□ -1.98
HSH155YMR288W YIL165CP40446 119 aa2.68□□□□□ -1.98
HSH155YMR288W CDC55Q00362 526 aa2.68□□□□□ -1.98
HSH155YMR288W NOP8Q08287 484 aaPredicted RBP2.68□□□□□ -1.98
HSH155YMR288W PDC5P16467 563 aaKnown RBP2.68□□□□□ -1.98
HSH155YMR288W YCK2P23292 546 aaKnown RBP2.68□□□□□ -1.98
HSH155YMR288W ETP1P38748 585 aaKnown RBP2.68□□□□□ -1.98
HSH155YMR288W ALO1P54783 526 aaKnown RBP2.68□□□□□ -1.98
HSH155YMR288W TY1A-DR2Q03964 440 aaKnown RBP2.68□□□□□ -1.98
HSH155YMR288W TIF6Q12522 245 aaKnown RBP2.68□□□□□ -1.98
HSH155YMR288W TOR2P32600 2474 aaKnown RBP2.67□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 42.5 ms