RNA–Protein interactions for RNA: YMR045C

YMR045C, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YMR045C, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YMR045CYMR045C SEC39Q12745 709 aa2.11□□□□□ -2.07
YMR045CYMR045C TCB3Q03640 1545 aaKnown RBP2.11□□□□□ -2.07
YMR045CYMR045C CHO2P05374 869 aaKnown RBP2.11□□□□□ -2.07
YMR045CYMR045C STI1P15705 589 aaKnown RBP RIP-Chip data2.11□□□□□ -2.07not detected
YMR045CYMR045C VPS21P36017 210 aaKnown RBP2.11□□□□□ -2.07
YMR045CYMR045C GEF1P37020 779 aa2.11□□□□□ -2.07
YMR045CYMR045C UIP3P39547 235 aa2.11□□□□□ -2.07
YMR045CYMR045C URM1P40554 99 aaPredicted RBP2.11□□□□□ -2.07
YMR045CYMR045C MSH4P40965 878 aaPredicted RBP2.11□□□□□ -2.07
YMR045CYMR045C CDC40P40968 455 aaPredicted RBP2.11□□□□□ -2.07
YMR045CYMR045C PBP1P53297 722 aaKnown RBP2.11□□□□□ -2.07
YMR045CYMR045C SIW14P53965 281 aa2.11□□□□□ -2.07
YMR045CYMR045C TIM50Q02776 476 aa2.11□□□□□ -2.07
YMR045CYMR045C ATP25Q03153 612 aa2.11□□□□□ -2.07
YMR045CYMR045C ADY3Q07732 790 aa2.11□□□□□ -2.07
YMR045CYMR045C YLL007CQ07799 665 aa2.11□□□□□ -2.07
YMR045CYMR045C CEX1Q12453 761 aa2.11□□□□□ -2.07
YMR045CYMR045C NSI1Q12457 570 aa2.11□□□□□ -2.07
YMR045CYMR045C SPS1P08458 490 aa2.11□□□□□ -2.07
YMR045CYMR045C KEX2P13134 814 aa2.11□□□□□ -2.07
YMR045CYMR045C YEF3P16521 1044 aaKnown RBP2.11□□□□□ -2.07
YMR045CYMR045C VMA4P22203 233 aaKnown RBP2.11□□□□□ -2.07
YMR045CYMR045C PAP1P29468 568 aaKnown RBP2.11□□□□□ -2.07
YMR045CYMR045C MRE11P32829 692 aa2.11□□□□□ -2.07
YMR045CYMR045C NPT1P39683 429 aaKnown RBP2.11□□□□□ -2.07
YMR045CYMR045C SLN1P39928 1220 aaPredicted RBP2.11□□□□□ -2.07
YMR045CYMR045C LTP1P40347 161 aa2.11□□□□□ -2.07
YMR045CYMR045C UTP18P40362 594 aaPredicted RBP2.11□□□□□ -2.07
YMR045CYMR045C TPM2P40414 161 aa2.11□□□□□ -2.07
YMR045CYMR045C CPR6P53691 371 aaKnown RBP2.11□□□□□ -2.07
YMR045CYMR045C HAP5Q02516 242 aa2.11□□□□□ -2.07
YMR045CYMR045C PPN1Q04119 674 aa2.11□□□□□ -2.07
YMR045CYMR045C RPN8Q08723 338 aaKnown RBP2.11□□□□□ -2.07
YMR045CYMR045C ATP14Q12349 124 aa2.11□□□□□ -2.07
YMR045CYMR045C PEP7P32609 515 aa2.1□□□□□ -2.07
YMR045CYMR045C DED81P38707 554 aaKnown RBP2.1□□□□□ -2.07
YMR045CYMR045C HAL5P38970 855 aaKnown RBP2.1□□□□□ -2.07
YMR045CYMR045C YJL107CP42947 387 aa2.1□□□□□ -2.07
YMR045CYMR045C ROK1P45818 564 aaPredicted RBP2.1□□□□□ -2.07
YMR045CYMR045C LOH1P47055 219 aa2.1□□□□□ -2.07
YMR045CYMR045C UBA2P52488 636 aa2.1□□□□□ -2.07
YMR045CYMR045C YKU80Q04437 629 aa2.1□□□□□ -2.07
YMR045CYMR045C POB3Q04636 552 aaKnown RBP2.1□□□□□ -2.07
YMR045CYMR045C BUG1Q12191 341 aa2.1□□□□□ -2.07
YMR045CYMR045C RAD2P07276 1031 aa2.1□□□□□ -2.07
YMR045CYMR045C CDC12P32468 407 aaKnown RBP2.1□□□□□ -2.07
YMR045CYMR045C PTH2P34222 208 aa2.1□□□□□ -2.07
YMR045CYMR045C RBG1P39729 369 aa2.1□□□□□ -2.07
YMR045CYMR045C TPA1P40032 644 aaKnown RBP2.1□□□□□ -2.07
YMR045CYMR045C HSV2P50079 448 aaPredicted RBP2.1□□□□□ -2.07
YMR045CYMR045C NMA2P53204 395 aa2.1□□□□□ -2.07
YMR045CYMR045C BOP3P53958 396 aa2.1□□□□□ -2.07
YMR045CYMR045C SPC19Q03954 165 aa2.1□□□□□ -2.07
YMR045CYMR045C YLR283WQ05867 314 aa2.1□□□□□ -2.07
YMR045CYMR045C PRT1P06103 763 aaKnown RBP2.1□□□□□ -2.07
YMR045CYMR045C MTF2P10849 440 aa2.1□□□□□ -2.07
YMR045CYMR045C HPR1P17629 752 aaKnown RBP2.1□□□□□ -2.07
YMR045CYMR045C PRP6P19735 899 aaPredicted RBP2.1□□□□□ -2.07
YMR045CYMR045C HCA4P20448 770 aaKnown RBP2.1□□□□□ -2.07
YMR045CYMR045C AAR2P32357 355 aaPredicted RBP2.1□□□□□ -2.07
YMR045CYMR045C CSE1P33307 960 aa2.1□□□□□ -2.07
YMR045CYMR045C JNM1P36224 373 aa2.1□□□□□ -2.07
YMR045CYMR045C GLY1P37303 387 aaKnown RBP2.1□□□□□ -2.07
YMR045CYMR045C SSF1P38789 453 aaPredicted RBP2.1□□□□□ -2.07
YMR045CYMR045C YAP5P40574 245 aa2.1□□□□□ -2.07
YMR045CYMR045C YJR098CP47139 656 aa2.1□□□□□ -2.07
YMR045CYMR045C NUP42P49686 430 aaKnown RBP2.1□□□□□ -2.07
YMR045CYMR045C ASE1P50275 885 aa2.1□□□□□ -2.07
YMR045CYMR045C YAP1802P53309 568 aa2.1□□□□□ -2.07
YMR045CYMR045C HEF3P53978 1044 aaKnown RBP2.1□□□□□ -2.07
YMR045CYMR045C USA1Q03714 838 aa2.1□□□□□ -2.07
YMR045CYMR045C AOS1Q06624 347 aa2.1□□□□□ -2.07
YMR045CYMR045C NEW1Q08972 1196 aaKnown RBP2.1□□□□□ -2.07
YMR045CYMR045C CDC53Q12018 815 aaKnown RBP2.1□□□□□ -2.07
YMR045CYMR045C ENT1Q12518 454 aa2.1□□□□□ -2.07
YMR045CYMR045C SPT7P35177 1332 aa2.1□□□□□ -2.07
YMR045CYMR045C NOT3P06102 836 aaKnown RBP2.1□□□□□ -2.07
YMR045CYMR045C STE6P12866 1290 aa2.1□□□□□ -2.07
YMR045CYMR045C SSD1P24276 1250 aaKnown RBP RIP-Chip data2.1□□□□□ -2.07not detected
YMR045CYMR045C PRP22P24384 1145 aaKnown RBP2.1□□□□□ -2.07
YMR045CYMR045C KRR1P25586 316 aaPredicted RBP2.1□□□□□ -2.07
YMR045CYMR045C PSO2P30620 661 aa2.1□□□□□ -2.07
YMR045CYMR045C NGR1P32831 672 aaKnown RBP2.1□□□□□ -2.07
YMR045CYMR045C YKR023WP36119 530 aaKnown RBP2.1□□□□□ -2.07
YMR045CYMR045C CIC1P38779 376 aaKnown RBP2.1□□□□□ -2.07
YMR045CYMR045C YHB1P39676 399 aaKnown RBP2.1□□□□□ -2.07
YMR045CYMR045C TIF4632P39936 914 aaKnown RBP2.1□□□□□ -2.07
YMR045CYMR045C AIM23P47015 356 aa2.1□□□□□ -2.07
YMR045CYMR045C VID30P53076 958 aa2.1□□□□□ -2.07
YMR045CYMR045C UTP8P53276 713 aaKnown RBP2.1□□□□□ -2.07
YMR045CYMR045C SEC5P89102 971 aa2.1□□□□□ -2.07
YMR045CYMR045C TBF1Q02457 562 aa2.1□□□□□ -2.07
YMR045CYMR045C CWC15Q03772 175 aaKnown RBP2.1□□□□□ -2.07
YMR045CYMR045C RBA50Q04418 439 aa2.1□□□□□ -2.07
YMR045CYMR045C YMR111CQ04461 462 aaPredicted RBP2.1□□□□□ -2.07
YMR045CYMR045C UFO1Q04511 668 aa2.1□□□□□ -2.07
YMR045CYMR045C LAP2Q10740 671 aa2.1□□□□□ -2.07
YMR045CYMR045C RPB2P08518 1224 aaKnown RBP2.09□□□□□ -2.07
YMR045CYMR045C KAR3P17119 729 aa2.09□□□□□ -2.07
YMR045CYMR045C SRB4P32569 687 aa2.09□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 36.1 ms