RNA–Protein interactions for RNA: YMR039C

SUB1, Transcript of Transcriptional coactivator, yeastyeast

Gene SUB1, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB1YMR039C ALO1P54783 526 aaKnown RBP6.16□□□□□ -1.42
SUB1YMR039C SEN54Q02825 467 aaPredicted RBP6.15□□□□□ -1.42
SUB1YMR039C GIC2Q06648 383 aa6.15□□□□□ -1.42
SUB1YMR039C MED7Q08278 222 aa6.15□□□□□ -1.42
SUB1YMR039C WHI5Q12416 295 aa6.15□□□□□ -1.42
SUB1YMR039C ARL1P38116 183 aaKnown RBP6.14□□□□□ -1.43
SUB1YMR039C INP52P50942 1183 aa6.14□□□□□ -1.43
SUB1YMR039C TRP3P00937 484 aa6.13□□□□□ -1.43
SUB1YMR039C TY1A-LR4P0C2I8 440 aaKnown RBP6.13□□□□□ -1.43
SUB1YMR039C TY1A-DR6P0CX70 440 aa6.13□□□□□ -1.43
SUB1YMR039C TY1A-ER1P0CX71 440 aa6.13□□□□□ -1.43
SUB1YMR039C TY1A-LR2P0CX72 440 aa6.13□□□□□ -1.43
SUB1YMR039C TY1A-PLP0CX73 440 aa6.13□□□□□ -1.43
SUB1YMR039C TY1A-JR1P0CX74 440 aa6.13□□□□□ -1.43
SUB1YMR039C TY1A-LR3P0CX75 440 aa6.13□□□□□ -1.43
SUB1YMR039C TY1A-ML2P0CX76 440 aa6.13□□□□□ -1.43
SUB1YMR039C MSB1P21339 1137 aaKnown RBP6.13□□□□□ -1.43
SUB1YMR039C MAC1P35192 417 aa6.13□□□□□ -1.43
SUB1YMR039C YKR073CP36153 106 aa6.13□□□□□ -1.43
SUB1YMR039C SHU2P38957 223 aa6.13□□□□□ -1.43
SUB1YMR039C DAK2P43550 591 aa6.13□□□□□ -1.43
SUB1YMR039C SPO74P45819 413 aa6.13□□□□□ -1.43
SUB1YMR039C DOT1Q04089 582 aaKnown RBP6.13□□□□□ -1.43
SUB1YMR039C TY1A-GR1Q12085 440 aa6.13□□□□□ -1.43
SUB1YMR039C TY1A-PR3Q6Q5H1 440 aaKnown RBP6.13□□□□□ -1.43
SUB1YMR039C TY1A-OLQ92392 440 aaKnown RBP6.13□□□□□ -1.43
SUB1YMR039C PRP40P33203 583 aaKnown RBP6.12□□□□□ -1.43
SUB1YMR039C GPT2P36148 743 aa6.12□□□□□ -1.43
SUB1YMR039C OMA1P36163 345 aa6.12□□□□□ -1.43
SUB1YMR039C REI1P38344 393 aaPredicted RBP6.12□□□□□ -1.43
SUB1YMR039C IPL1P38991 367 aa6.12□□□□□ -1.43
SUB1YMR039C NOG1Q02892 647 aaKnown RBP6.12□□□□□ -1.43
SUB1YMR039C KAR2P16474 682 aaKnown RBP6.11□□□□□ -1.43
SUB1YMR039C SLD2P34252 453 aa6.11□□□□□ -1.43
SUB1YMR039C EXO5P38289 585 aa6.11□□□□□ -1.43
SUB1YMR039C THI12P42883 340 aa6.11□□□□□ -1.43
SUB1YMR039C THI5P43534 340 aa6.11□□□□□ -1.43
SUB1YMR039C THI11P47183 340 aa6.11□□□□□ -1.43
SUB1YMR039C YGR130CP53278 816 aa6.11□□□□□ -1.43
SUB1YMR039C THI13Q07748 340 aa6.11□□□□□ -1.43
SUB1YMR039C YKL077WP36081 392 aa6.1□□□□□ -1.43
SUB1YMR039C OXR1Q08952 273 aa6.1□□□□□ -1.43
SUB1YMR039C TOS1P38288 455 aa6.09□□□□□ -1.43
SUB1YMR039C DAL4Q04895 635 aa6.09□□□□□ -1.43
SUB1YMR039C CYC7P00045 113 aa6.08□□□□□ -1.44
SUB1YMR039C MMM1P41800 426 aa6.08□□□□□ -1.44
SUB1YMR039C ULP1Q02724 621 aa6.08□□□□□ -1.44
SUB1YMR039C YML020WQ03722 664 aa6.08□□□□□ -1.44
SUB1YMR039C NOP8Q08287 484 aaPredicted RBP6.08□□□□□ -1.44
SUB1YMR039C ALG6Q12001 544 aaKnown RBP6.08□□□□□ -1.44
SUB1YMR039C PUB1P32588 453 aaKnown RBP RIP-Chip data6.07□□□□□ -1.44not detected
SUB1YMR039C UGA4P32837 571 aa6.07□□□□□ -1.44
SUB1YMR039C MSH4P40965 878 aaPredicted RBP6.07□□□□□ -1.44
SUB1YMR039C CIT3P43635 486 aa6.07□□□□□ -1.44
SUB1YMR039C MSH3P25336 1018 aa6.06□□□□□ -1.44
SUB1YMR039C NEM1P38757 446 aa6.06□□□□□ -1.44
SUB1YMR039C SLS1P42900 643 aa6.06□□□□□ -1.44
SUB1YMR039C YGR045CP53229 120 aa6.06□□□□□ -1.44
SUB1YMR039C TOS4Q06266 489 aa6.06□□□□□ -1.44
SUB1YMR039C YOR059CQ08448 450 aaKnown RBP6.06□□□□□ -1.44
SUB1YMR039C RPS4AP0CX35 261 aaKnown RBP6.05□□□□□ -1.44
SUB1YMR039C RPS4BP0CX36 261 aaKnown RBP6.05□□□□□ -1.44
SUB1YMR039C VMA4P22203 233 aaKnown RBP6.05□□□□□ -1.44
SUB1YMR039C RPT1P33299 467 aaKnown RBP6.05□□□□□ -1.44
SUB1YMR039C SQT1P35184 431 aa6.05□□□□□ -1.44
SUB1YMR039C MTR4P47047 1073 aaKnown RBP6.05□□□□□ -1.44
SUB1YMR039C RSM26P47141 266 aa6.05□□□□□ -1.44
SUB1YMR039C CTH1P47976 325 aa6.05□□□□□ -1.44
SUB1YMR039C ALT1P52893 592 aa6.05□□□□□ -1.44
SUB1YMR039C YPL109CQ02981 657 aa6.05□□□□□ -1.44
SUB1YMR039C MAG2Q06436 670 aaKnown RBP6.05□□□□□ -1.44
SUB1YMR039C BRE4Q07660 1125 aa6.05□□□□□ -1.44
SUB1YMR039C AVO1Q08236 1176 aa6.05□□□□□ -1.44
SUB1YMR039C HXK1P04806 485 aaKnown RBP6.04□□□□□ -1.44
SUB1YMR039C SMY2P32909 740 aaKnown RBP6.04□□□□□ -1.44
SUB1YMR039C WHI3P34761 661 aaKnown RBP6.04□□□□□ -1.44
SUB1YMR039C NNK1P36003 928 aa6.04□□□□□ -1.44
SUB1YMR039C ELA1P53861 379 aaPredicted RBP6.04□□□□□ -1.44
SUB1YMR039C ADI1Q03677 179 aa6.04□□□□□ -1.44
SUB1YMR039C UTP5Q04177 643 aaKnown RBP6.04□□□□□ -1.44
SUB1YMR039C LIP5P32875 414 aa6.03□□□□□ -1.44
SUB1YMR039C PEX28P38848 579 aa6.03□□□□□ -1.44
SUB1YMR039C FAA3P39002 694 aa6.03□□□□□ -1.44
SUB1YMR039C PEX13P80667 386 aa6.03□□□□□ -1.44
SUB1YMR039C NFS1P25374 497 aa6.02□□□□□ -1.45
SUB1YMR039C RCM1P53972 490 aa6.02□□□□□ -1.45
SUB1YMR039C NSI1Q12457 570 aa6.02□□□□□ -1.45
SUB1YMR039C GCD1P09032 578 aaPredicted RBP6.01□□□□□ -1.45
SUB1YMR039C RDH54P38086 958 aa6.01□□□□□ -1.45
SUB1YMR039C YAR028WP39548 234 aa6.01□□□□□ -1.45
SUB1YMR039C YGR122WP53272 402 aa6.01□□□□□ -1.45
SUB1YMR039C SCP160P06105 1222 aaKnown RBP RIP-Chip data6□□□□□ -1.45not detected
SUB1YMR039C OYE3P41816 400 aaPredicted RBP6□□□□□ -1.45
SUB1YMR039C YGL140CP53120 1219 aa6□□□□□ -1.45
SUB1YMR039C YVC1Q12324 675 aa6□□□□□ -1.45
SUB1YMR039C SEC23P15303 768 aaKnown RBP5.99□□□□□ -1.45
SUB1YMR039C HEM3P28789 327 aa5.99□□□□□ -1.45
SUB1YMR039C MGE1P38523 228 aa5.99□□□□□ -1.45
SUB1YMR039C HSE1P38753 452 aa5.99□□□□□ -1.45
SUB1YMR039C XKS1P42826 600 aa5.99□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms