RNA–Protein interactions for RNA: YLR264W

RPS28B, Transcript of Protein component of the small (40S) ribosomal subunit, yeast

Gene RPS28B, Length 204 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPS28B	YLR264W	ADA2	Q02336	434 aa		3.52	□□□□□ -1.85
RPS28B	YLR264W	SPO19	Q03029	223 aa		3.52	□□□□□ -1.85
RPS28B	YLR264W	UTP13	Q05946	817 aa	Known RBP	3.52	□□□□□ -1.85
RPS28B	YLR264W	MAG2	Q06436	670 aa	Known RBP	3.52	□□□□□ -1.85
RPS28B	YLR264W	AOS1	Q06624	347 aa		3.52	□□□□□ -1.85
RPS28B	YLR264W	DNL4	Q08387	944 aa	Predicted RBP	3.52	□□□□□ -1.85
RPS28B	YLR264W	YOR378W	Q08902	515 aa		3.52	□□□□□ -1.85
RPS28B	YLR264W	RRI2	Q12348	645 aa		3.52	□□□□□ -1.85
RPS28B	YLR264W	RTP1	Q12751	981 aa		3.52	□□□□□ -1.85
RPS28B	YLR264W	STH1	P32597	1359 aa		3.51	□□□□□ -1.85
RPS28B	YLR264W	YMR084W	A2P2R3	262 aa		3.51	□□□□□ -1.85
RPS28B	YLR264W	TEF1	P02994	458 aa	Known RBP	3.51	□□□□□ -1.85
RPS28B	YLR264W	ATE1	P16639	503 aa		3.51	□□□□□ -1.85
RPS28B	YLR264W	GFD2	P25370	566 aa	Known RBP	3.51	□□□□□ -1.85
RPS28B	YLR264W	DAL80	P26343	269 aa		3.51	□□□□□ -1.85
RPS28B	YLR264W	PAP1	P29468	568 aa	Known RBP	3.51	□□□□□ -1.85
RPS28B	YLR264W	SLA1	P32790	1244 aa		3.51	□□□□□ -1.85
RPS28B	YLR264W	NUF2	P33895	451 aa		3.51	□□□□□ -1.85
RPS28B	YLR264W	YEL1	P34225	687 aa		3.51	□□□□□ -1.85
RPS28B	YLR264W	PXA2	P34230	853 aa		3.51	□□□□□ -1.85
RPS28B	YLR264W	RRN3	P36070	627 aa		3.51	□□□□□ -1.85
RPS28B	YLR264W	SET3	P36124	751 aa		3.51	□□□□□ -1.85
RPS28B	YLR264W	RTG3	P38165	486 aa		3.51	□□□□□ -1.85
RPS28B	YLR264W	HSM3	P38348	480 aa		3.51	□□□□□ -1.85
RPS28B	YLR264W	YHR020W	P38708	688 aa	Known RBP	3.51	□□□□□ -1.85
RPS28B	YLR264W	RTS1	P38903	757 aa		3.51	□□□□□ -1.85
RPS28B	YLR264W	VAC8	P39968	578 aa		3.51	□□□□□ -1.85
RPS28B	YLR264W	BIM1	P40013	344 aa		3.51	□□□□□ -1.85
RPS28B	YLR264W	NDE1	P40215	560 aa		3.51	□□□□□ -1.85
RPS28B	YLR264W	YJL070C	P40361	888 aa		3.51	□□□□□ -1.85
RPS28B	YLR264W	NDC80	P40460	691 aa		3.51	□□□□□ -1.85
RPS28B	YLR264W	SAP185	P40856	1058 aa		3.51	□□□□□ -1.85
RPS28B	YLR264W	BUD6	P41697	788 aa		3.51	□□□□□ -1.85
RPS28B	YLR264W	SRB7	P47822	140 aa		3.51	□□□□□ -1.85
RPS28B	YLR264W	YGR153W	P48238	217 aa		3.51	□□□□□ -1.85
RPS28B	YLR264W	NUP84	P52891	726 aa		3.51	□□□□□ -1.85
RPS28B	YLR264W	CWH41	P53008	833 aa		3.51	□□□□□ -1.85
RPS28B	YLR264W	SDA1	P53313	767 aa	Known RBP	3.51	□□□□□ -1.85
RPS28B	YLR264W	LSC1	P53598	329 aa	Known RBP	3.51	□□□□□ -1.85
RPS28B	YLR264W	IST1	P53843	298 aa	Predicted RBP	3.51	□□□□□ -1.85
RPS28B	YLR264W	SPC19	Q03954	165 aa		3.51	□□□□□ -1.85
RPS28B	YLR264W	ESF1	Q06344	628 aa	Known RBP	3.51	□□□□□ -1.85
RPS28B	YLR264W	YPR097W	Q06839	1073 aa		3.51	□□□□□ -1.85
RPS28B	YLR264W	NOC3	Q07896	663 aa	Predicted RBP	3.51	□□□□□ -1.85
RPS28B	YLR264W	YPL277C	Q08989	487 aa		3.51	□□□□□ -1.85
RPS28B	YLR264W	AIM7	Q12156	149 aa		3.51	□□□□□ -1.85
RPS28B	YLR264W	SWI1	P09547	1314 aa		3.5	□□□□□ -1.85
RPS28B	YLR264W	IKI3	Q06706	1349 aa	Known RBP	3.5	□□□□□ -1.85
RPS28B	YLR264W	RTC1	Q08281	1341 aa		3.5	□□□□□ -1.85
RPS28B	YLR264W	STF1	P01098	86 aa		3.5	□□□□□ -1.85
RPS28B	YLR264W	RAD4	P14736	754 aa		3.5	□□□□□ -1.85
RPS28B	YLR264W	KRE6	P32486	720 aa		3.5	□□□□□ -1.85
RPS28B	YLR264W	BUD2	P33314	1104 aa		3.5	□□□□□ -1.85
RPS28B	YLR264W	MIA40	P36046	403 aa		3.5	□□□□□ -1.85
RPS28B	YLR264W	MRPL40	P36534	297 aa		3.5	□□□□□ -1.85
RPS28B	YLR264W	PSY4	P38193	441 aa		3.5	□□□□□ -1.85
RPS28B	YLR264W	APD1	P38281	316 aa		3.5	□□□□□ -1.85
RPS28B	YLR264W	SSZ1	P38788	538 aa	Known RBP	3.5	□□□□□ -1.85
RPS28B	YLR264W	CTM1	P38818	585 aa		3.5	□□□□□ -1.85
RPS28B	YLR264W	MAD1	P40957	749 aa		3.5	□□□□□ -1.85
RPS28B	YLR264W	YRB1	P41920	201 aa	Known RBP	3.5	□□□□□ -1.85
RPS28B	YLR264W	RET2	P43621	546 aa		3.5	□□□□□ -1.85
RPS28B	YLR264W	SAE2	P46946	345 aa		3.5	□□□□□ -1.85
RPS28B	YLR264W	IML2	P47031	731 aa		3.5	□□□□□ -1.85
RPS28B	YLR264W	YJL007C	P47080	104 aa		3.5	□□□□□ -1.85
RPS28B	YLR264W	TRF5	P48561	642 aa	Known RBP	3.5	□□□□□ -1.85
RPS28B	YLR264W	PEX14	P53112	341 aa		3.5	□□□□□ -1.85
RPS28B	YLR264W	PEX8	P53248	589 aa		3.5	□□□□□ -1.85
RPS28B	YLR264W	DCP2	P53550	970 aa	Known RBP	3.5	□□□□□ -1.85
RPS28B	YLR264W	SAS4	Q04003	481 aa		3.5	□□□□□ -1.85
RPS28B	YLR264W	SND1	Q04007	877 aa		3.5	□□□□□ -1.85
RPS28B	YLR264W	YMR018W	Q04364	514 aa		3.5	□□□□□ -1.85
RPS28B	YLR264W	PEX19	Q07418	342 aa		3.5	□□□□□ -1.85
RPS28B	YLR264W	ESC8	Q08119	714 aa		3.5	□□□□□ -1.85
RPS28B	YLR264W	BRX1	Q08235	291 aa	Known RBP	3.5	□□□□□ -1.85
RPS28B	YLR264W	NOB1	Q08444	459 aa	Known RBP	3.5	□□□□□ -1.85
RPS28B	YLR264W	PGC1	Q08959	321 aa		3.5	□□□□□ -1.85
RPS28B	YLR264W	RKM1	Q08961	583 aa	Predicted RBP	3.5	□□□□□ -1.85
RPS28B	YLR264W	MCD1	Q12158	566 aa		3.5	□□□□□ -1.85
RPS28B	YLR264W	PHM7	Q12252	991 aa		3.5	□□□□□ -1.85
RPS28B	YLR264W	NYV1	Q12255	253 aa		3.5	□□□□□ -1.85
RPS28B	YLR264W	SEC39	Q12745	709 aa		3.5	□□□□□ -1.85
RPS28B	YLR264W	RPS3	P05750	240 aa	Known RBP	3.49	□□□□□ -1.85
RPS28B	YLR264W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	3.49	□□□□□ -1.85	not detected
RPS28B	YLR264W	RPC40	P07703	335 aa	Known RBP	3.49	□□□□□ -1.85
RPS28B	YLR264W	RED1	P14291	827 aa		3.49	□□□□□ -1.85
RPS28B	YLR264W	TRM1	P15565	570 aa	Known RBP	3.49	□□□□□ -1.85
RPS28B	YLR264W	PDI1	P17967	522 aa	Known RBP	3.49	□□□□□ -1.85
RPS28B	YLR264W	PMA2	P19657	947 aa		3.49	□□□□□ -1.85
RPS28B	YLR264W	POL4	P25615	582 aa		3.49	□□□□□ -1.85
RPS28B	YLR264W	EUG1	P32474	517 aa		3.49	□□□□□ -1.85
RPS28B	YLR264W	SFA1	P32771	386 aa		3.49	□□□□□ -1.85
RPS28B	YLR264W	RIM101	P33400	625 aa		3.49	□□□□□ -1.85
RPS28B	YLR264W	SWH1	P35845	1188 aa		3.49	□□□□□ -1.85
RPS28B	YLR264W	TAF5	P38129	798 aa		3.49	□□□□□ -1.85
RPS28B	YLR264W	YBL028C	P38202	106 aa		3.49	□□□□□ -1.85
RPS28B	YLR264W	PIH1	P38768	344 aa		3.49	□□□□□ -1.85
RPS28B	YLR264W	GGA2	P38817	585 aa	Known RBP	3.49	□□□□□ -1.85
RPS28B	YLR264W	TOM71	P38825	639 aa	Known RBP	3.49	□□□□□ -1.85
RPS28B	YLR264W	ALD5	P40047	520 aa	Known RBP	3.49	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 40.7 ms