RNA–Protein interactions for RNA: YLL050C

COF1, Transcript of Cofilin, involved in pH-dependent actin filament depolarization, yeastyeast

Gene COF1, Length 432 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
COF1YLL050C SIS2P36024 562 aa3.24□□□□□ -1.89
COF1YLL050C TAT2P38967 592 aa3.23□□□□□ -1.89
COF1YLL050C MPT5P39016 859 aaKnown RBP RIP-Chip data3.23□□□□□ -1.89not detected
COF1YLL050C MSE1P48525 536 aa3.23□□□□□ -1.89
COF1YLL050C ALD4P46367 519 aaKnown RBP3.22□□□□□ -1.89
COF1YLL050C YIG1Q08956 461 aa3.22□□□□□ -1.89
COF1YLL050C PYC2P32327 1180 aaKnown RBP3.21□□□□□ -1.9
COF1YLL050C NTA1P40354 457 aa3.21□□□□□ -1.9
COF1YLL050C RAD53P22216 821 aa3.2□□□□□ -1.9
COF1YLL050C SMY2P32909 740 aaKnown RBP3.2□□□□□ -1.9
COF1YLL050C SNM1P40993 198 aa3.2□□□□□ -1.9
COF1YLL050C TIF6Q12522 245 aaKnown RBP3.2□□□□□ -1.9
COF1YLL050C FOL2P51601 243 aaKnown RBP3.19□□□□□ -1.9
COF1YLL050C YDR132CQ03900 495 aa3.19□□□□□ -1.9
COF1YLL050C ALG6Q12001 544 aaKnown RBP3.19□□□□□ -1.9
COF1YLL050C MEC3Q02574 474 aa3.18□□□□□ -1.9
COF1YLL050C KTR2P33550 425 aa3.17□□□□□ -1.9
COF1YLL050C RAD55P38953 406 aa3.17□□□□□ -1.9
COF1YLL050C HTS1P07263 546 aaKnown RBP3.16□□□□□ -1.9
COF1YLL050C IRS4P36115 615 aaKnown RBP3.16□□□□□ -1.9
COF1YLL050C REI1P38344 393 aaPredicted RBP3.16□□□□□ -1.9
COF1YLL050C PSY2P40164 858 aa3.16□□□□□ -1.9
COF1YLL050C SPT20P50875 604 aa3.16□□□□□ -1.9
COF1YLL050C SUN4P53616 420 aa3.16□□□□□ -1.9
COF1YLL050C ECM23Q02710 187 aa3.16□□□□□ -1.9
COF1YLL050C NNK1P36003 928 aa3.15□□□□□ -1.91
COF1YLL050C TGL4P36165 910 aa3.15□□□□□ -1.91
COF1YLL050C UBX7P38349 436 aa3.15□□□□□ -1.91
COF1YLL050C SUT1P53032 299 aaKnown RBP3.15□□□□□ -1.91
COF1YLL050C CTF4Q01454 927 aa3.15□□□□□ -1.91
COF1YLL050C ELA1P53861 379 aaPredicted RBP3.14□□□□□ -1.91
COF1YLL050C PUS7Q08647 676 aaKnown RBP3.14□□□□□ -1.91
COF1YLL050C HCM1P25364 564 aa3.13□□□□□ -1.91
COF1YLL050C AIM21P40563 679 aa3.12□□□□□ -1.91
COF1YLL050C HGH1P48362 394 aaKnown RBP3.12□□□□□ -1.91
COF1YLL050C YGR045CP53229 120 aa3.12□□□□□ -1.91
COF1YLL050C UTP22P53254 1237 aaPredicted RBP3.12□□□□□ -1.91
COF1YLL050C GCN5Q03330 439 aa3.12□□□□□ -1.91
COF1YLL050C TPP1Q03796 238 aa3.12□□□□□ -1.91
COF1YLL050C PUN1Q06991 263 aa3.12□□□□□ -1.91
COF1YLL050C APC11Q12157 165 aa3.12□□□□□ -1.91
COF1YLL050C SAM35P14693 329 aa3.11□□□□□ -1.91
COF1YLL050C PMI40P29952 429 aaKnown RBP3.11□□□□□ -1.91
COF1YLL050C YHL012WP38709 493 aa3.11□□□□□ -1.91
COF1YLL050C CHS7P38843 316 aa3.11□□□□□ -1.91
COF1YLL050C URN1Q06525 465 aaKnown RBP3.11□□□□□ -1.91
COF1YLL050C NPR1P22211 790 aa3.1□□□□□ -1.91
COF1YLL050C RIM11P38615 370 aa3.1□□□□□ -1.91
COF1YLL050C AVO1Q08236 1176 aa3.1□□□□□ -1.91
COF1YLL050C YOR352WQ08816 343 aa3.1□□□□□ -1.91
COF1YLL050C CMR1Q12510 522 aaKnown RBP3.1□□□□□ -1.91
COF1YLL050C SRS2P12954 1174 aa3.09□□□□□ -1.91
COF1YLL050C AIM26P32858 118 aa3.09□□□□□ -1.91
COF1YLL050C SMC1P32908 1225 aa3.09□□□□□ -1.91
COF1YLL050C MDL2P33311 773 aa3.09□□□□□ -1.91
COF1YLL050C LAM1P38851 1228 aa3.09□□□□□ -1.91
COF1YLL050C MEF2P39677 819 aa3.09□□□□□ -1.91
COF1YLL050C CTR9P89105 1077 aa3.09□□□□□ -1.91
COF1YLL050C PUF6Q04373 656 aaKnown RBP3.09□□□□□ -1.91
COF1YLL050C SGD1Q06132 899 aa3.09□□□□□ -1.91
COF1YLL050C NTO1Q12311 748 aa3.09□□□□□ -1.91
COF1YLL050C RPB10P22139 70 aa3.08□□□□□ -1.92
COF1YLL050C COBP00163 385 aa3.07□□□□□ -1.92
COF1YLL050C PRP5P21372 849 aaPredicted RBP3.07□□□□□ -1.92
COF1YLL050C ENV11P53246 860 aa3.07□□□□□ -1.92
COF1YLL050C BDF2Q07442 638 aa3.07□□□□□ -1.92
COF1YLL050C PUF4P25339 888 aaKnown RBP RIP-Chip data3.06□□□□□ -1.92not detected
COF1YLL050C DOM34P33309 386 aa3.06□□□□□ -1.92
COF1YLL050C STE11P23561 717 aa3.05□□□□□ -1.92
COF1YLL050C ARL1P38116 183 aaKnown RBP3.05□□□□□ -1.92
COF1YLL050C MNN10P50108 393 aaKnown RBP3.05□□□□□ -1.92
COF1YLL050C ATF1P40353 525 aa3.04□□□□□ -1.92
COF1YLL050C MCM6P53091 1017 aaKnown RBP3.04□□□□□ -1.92
COF1YLL050C TY1A-LR4P0C2I8 440 aaKnown RBP3.03□□□□□ -1.92
COF1YLL050C TY1A-DR6P0CX70 440 aa3.03□□□□□ -1.92
COF1YLL050C TY1A-ER1P0CX71 440 aa3.03□□□□□ -1.92
COF1YLL050C TY1A-LR2P0CX72 440 aa3.03□□□□□ -1.92
COF1YLL050C TY1A-PLP0CX73 440 aa3.03□□□□□ -1.92
COF1YLL050C TY1A-JR1P0CX74 440 aa3.03□□□□□ -1.92
COF1YLL050C TY1A-LR3P0CX75 440 aa3.03□□□□□ -1.92
COF1YLL050C TY1A-ML2P0CX76 440 aa3.03□□□□□ -1.92
COF1YLL050C SRO9P25567 434 aaKnown RBP3.03□□□□□ -1.92
COF1YLL050C RRN6P32786 894 aa3.03□□□□□ -1.92
COF1YLL050C LST4P34239 828 aa3.03□□□□□ -1.92
COF1YLL050C NMD3P38861 518 aaKnown RBP3.03□□□□□ -1.92
COF1YLL050C UBP3Q01477 912 aaKnown RBP RIP-Chip data3.03□□□□□ -1.92not detected
COF1YLL050C TMA10Q06177 86 aa3.03□□□□□ -1.92
COF1YLL050C PPM2Q08282 695 aa3.03□□□□□ -1.92
COF1YLL050C TY1A-GR1Q12085 440 aa3.03□□□□□ -1.92
COF1YLL050C TY1A-PR3Q6Q5H1 440 aaKnown RBP3.03□□□□□ -1.92
COF1YLL050C TY1A-OLQ92392 440 aaKnown RBP3.03□□□□□ -1.92
COF1YLL050C SPS1P08458 490 aa3.02□□□□□ -1.93
COF1YLL050C KIN4Q01919 800 aa3.02□□□□□ -1.93
COF1YLL050C DUS4Q06063 367 aa3.02□□□□□ -1.93
COF1YLL050C CYC1P00044 109 aaPredicted RBP3.01□□□□□ -1.93
COF1YLL050C DUR3P33413 735 aa3.01□□□□□ -1.93
COF1YLL050C ECM2P38241 364 aaKnown RBP3.01□□□□□ -1.93
COF1YLL050C PHO23P50947 330 aa3.01□□□□□ -1.93
COF1YLL050C ROT1Q03691 256 aa3.01□□□□□ -1.93
COF1YLL050C YLR257WQ06146 321 aaKnown RBP3.01□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms